Basic Information

Insect: Petrophora chlorosata
Gene Symbol: -
Assembly: GCA_951640565.1
Location: OX621200.1:3818741-3842844[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0008 0.072 14.4 3.4 1 23 244 266 244 266 0.98

2 11 0.0052 0.47 11.8 10.5 1 23 272 294 272 294 0.95

3 11 0.0004 0.036 15.3 5.5 1 23 300 322 300 322 0.98

4 11 0.00023 0.021 16.1 1.3 1 23 328 350 328 350 0.98

5 11 2e-05 0.0018 19.4 1.0 1 23 356 378 356 378 0.97

6 11 3.8e-05 0.0034 18.6 0.1 1 23 384 406 384 406 0.98

7 11 0.00017 0.015 16.5 0.4 1 23 411 433 411 433 0.96

8 11 0.69 62 5.2 2.1 3 19 441 457 440 460 0.96

9 11 4e-05 0.0037 18.5 0.3 1 23 581 603 581 603 0.98

10 11 0.0003 0.028 15.7 1.4 1 23 1608 1630 1608 1630 0.96

11 11 0.019 1.7 10.1 5.2 5 23 1643 1661 1634 1661 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0008	0.072	14.4	3.4	1	23	244	266	244	266	0.98
2	11	0.0052	0.47	11.8	10.5	1	23	272	294	272	294	0.95
3	11	0.0004	0.036	15.3	5.5	1	23	300	322	300	322	0.98
4	11	0.00023	0.021	16.1	1.3	1	23	328	350	328	350	0.98
5	11	2e-05	0.0018	19.4	1.0	1	23	356	378	356	378	0.97
6	11	3.8e-05	0.0034	18.6	0.1	1	23	384	406	384	406	0.98
7	11	0.00017	0.015	16.5	0.4	1	23	411	433	411	433	0.96
8	11	0.69	62	5.2	2.1	3	19	441	457	440	460	0.96
9	11	4e-05	0.0037	18.5	0.3	1	23	581	603	581	603	0.98
10	11	0.0003	0.028	15.7	1.4	1	23	1608	1630	1608	1630	0.96
11	11	0.019	1.7	10.1	5.2	5	23	1643	1661	1634	1661	0.89

Sequence Information

Coding Sequence: ATGTGTATGCCAACGCCTAATAATGTGTCGGGCTTCGGCGGTTATTCGTGGGGCTTCACGAGTTCTGCAGACCTTACCAAGGGCGAGGTGGAAACTCCGAGCAGCCTCAGTTACACACTTGGGAGTTCtGTATCTCCGGAGACCACCCTGACAGTGATGTCCCATAAGACTCCCCAAGTCCAGGAGAAAGTTGGTACAGTCTCTGTAGCAGTCTCCAATACAGGAGCTCAAGTGACGAGGGTGGTGACAACTGGTACACCAGTGACGGCTAGGAGAGCCATGTTTGTGTTGAATGAGGCACCTACACATACAATAAATAGGGTCTCTCAGCAGAACCAAACTACTATACATACTGCCAACCTAGCAAGTAAGCCATTCATGACTCCAATTGGACCAATCCAGCTGACTGCTGAAGAATGCAATGAGATTCTAATGAAGCGGGCCCTTCAAGCACAAGGCATAGCCACACCGGTCATAGACGCATCACAGTTGAACCATACAATACTGAATGGTGGACTGAAGAGTTTAGCAGAAGTGACTAGCCAGCAGAATCAACAGCAGGATACGATACAGACTACCACAGTGCAGCAGCATCATTTATTGCATGCGAAGCAAGAGCCTGGAACAACAAATAATTCACCTAAGACGGTATATTCGCAGACGGACCTGCTAACCACCAACACAGTGATGGCGAGCGCTCCGCCTGCTCCTACCGTTAAGGAGCGCCCTTACTCCTGCGACGAGTGTGGCAAGTCGTTTCTGTTGAAGCACCATCTTACTACGCATGCGAGAGTCCATACTGGTGAGCGCCCGCATGCGTGTACGCACTGCGGCAAGACATTTGCGCACAAACATTGCCTCAACACGCATCTTCTGTTGCACTCCAACAACCGCCCCTACCAATGCGGGGAATGCAAGAAAACCTTTACACTGAAACACCATCTACTATCGCACTCACGGGTACACAGTCGCGACCGTCCATACGTATGCAACGAGTGCGGGCGTGGCTTCCCTTTAAACAGACACCTCGTGACGCACAGGAAGTATCACGCAGGAGAGAGGCCTTTCGTCTGTAACGACTGTGGAGAGAGCTTTGCACAGAAGGAGCACCTAGTAATGCACAGCCGGTTCCACGGCTCGCTGTCGCCGTTCGTGTGTTCGGACTGCGGCGCGGCGTTCGCGCGCAAGTTCCAGCTCGTGAACCACGGGCGCGTGCACGGCCGCGTGCCGCACGCGTGCCCCGTCTGCGGGAAGGAGTTCCTGCAGAAACGGACGCTCGTCGCGCACATGAAGATTCACACCGGAGACAATGTGGTAGCCTGCCTGGAATGCGGTGAAGCCTTCAAATGCAAAAGCGATCTTCAACAGCACTGTAAAGCGACGCGGCACTGCTACTCGGCGAACCAAGTCCAACAAAACCAACAGCAAGTCCAACAACAACAGGTCCAacagcaacaacaacaacaacaacagcagCAGCAACAACAACAGACAGTTATAAAGACAGATGACTTCAAACCTCAGATTGTGCAGGTTTTCTGCAAGCCGCAGGTCCAGCAACAACTGCAACAGTTGGCACAACAACAACAGCAGCAACAACAACAGCAGCAACAGCAACAGCAGCAACAACAGCAACAGCAACAACAGCAAACAACAGTTATAAAGACTGACGACTTCAAGCCACAAATTGTACAGGTTATAGGTGCAGACGGTCAAATTGTGTCGGATAAGCAACCTGGCTACGCGTGTCCGGAATGCGGCTCGTGTTTTAATACTAAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCTGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACACCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACATTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCTGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACACCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACATTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGAGCGACCGCACGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCTGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACACCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACAGTGAGTACACATGCATCCTCAGTTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACATTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACATTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCTGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACATTGTGATACAGGAGGCGCTGTCGCTGCACGTGCGGATCCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACGGCCGCGCTGCAGCCGGAGCTGGTGGCGGCGGCGCAACAAGGCACGCACACGCGCATGCTGGTCCTTCTGGTGTCGGAATCATTGACCGCCCGAAGAACTCCGACATTTGCTTACGACCCCGACGGGACCAACGGCTTAAAGTGCATTCCGAAACACTCGCTTCGGCCGACGTTGCTCGACCTAGCAGatcaGCCCATCCAAATAATATCGTCCAACCCCAATAATAACGTAGTACATACGCAAGTAATAGCAACTAATCACCACGTAACGCCTCGGCCTAAGATGCACTTCTGTGGTGAATGCGGGAAAGGATTCGCCGCGAAACACGGACTACTGGCGCATCAAAGGAGACACCCCGACGGCAGCTGCACTCTGCGCACGCACGTGTGCGAGTGTGGCAAAGCTTTCTTCCAGAAGAACCATCTCATGCTACATCAGAGGCAGCACATGGATCTACCTACTAGAAAtagTCAGCAACAGCAACAGCAACAACAACAgcagcaacaacaacaacaagcgCAAGCGGCGGCGCAACAAGCAGCGCAGCAAGCCGCGCAACAAGTTGAGCAACAAGTGCAACAGCAAGTGCAACAGCAAGTGCAACAGCAGGTGCAACAGCAACACCATCAGAACAGCTTGGAGATAGAACAAGATCATCAGCAGCCGACGCATATACAAGTGGTGAACCGGTCCGGCCAGGTGATCGGCAACCAGATAGTGGTGGGCGGAGTGCGCGGGCGGCTCGTGACTCCGCACGTGCACATCCTGGGGCGCGACGCCAAGCACCTCGCGCACAGCAAGCACCACGCGCATCGCCACCACACCGCCAGGAGTTACACGGCCAGTACAGATAGACTACTGTATTTGTACAGGAGTTACACGGCCAGTACAGACGGGTTACAGCACTCGTACAAACACGACAAATTGAGATAG
Protein Sequence: MCMPTPNNVSGFGGYSWGFTSSADLTKGEVETPSSLSYTLGSSVSPETTLTVMSHKTPQVQEKVGTVSVAVSNTGAQVTRVVTTGTPVTARRAMFVLNEAPTHTINRVSQQNQTTIHTANLASKPFMTPIGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHTILNGGLKSLAEVTSQQNQQQDTIQTTTVQQHHLLHAKQEPGTTNNSPKTVYSQTDLLTTNTVMASAPPAPTVKERPYSCDECGKSFLLKHHLTTHARVHTGERPHACTHCGKTFAHKHCLNTHLLLHSNNRPYQCGECKKTFTLKHHLLSHSRVHSRDRPYVCNECGRGFPLNRHLVTHRKYHAGERPFVCNDCGESFAQKEHLVMHSRFHGSLSPFVCSDCGAAFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGDNVVACLECGEAFKCKSDLQQHCKATRHCYSANQVQQNQQQVQQQQVQQQQQQQQQQQQQQQTVIKTDDFKPQIVQVFCKPQVQQQLQQLAQQQQQQQQQQQQQQQQQQQQQQQQTTVIKTDDFKPQIVQVIGADGQIVSDKQPGYACPECGSCFNTKEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHSEYTCILSCDTGGAVAARADPRGRPHEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHSEYTCILSCDTGGAVAARADPRGRPHEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHSEYTCILSCDTGGAVAARADPRGRPHEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHSEYTCILSCDTGGAVAARADPRGRPHEALSLHVRIHAGDRTCVTDLCALTAALQLELVAAAQQGTHSEYTCILSCDTGGAVAARADPRGRPHVRDGPVRAHGRAAAGAGGGGATRHAHRSWWRRRNKARTVSTHASSVVIQEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHIVIQEALSLHVRIHAGDRTCVTDLCALTAALQLELVAAAQQGTHSEYTCILSCDTGGAVAARADPRGRPHVRDGPVRAHGRAAAGAGGGGATRHAHRSWWRRRNKARTVSTHASSVVIQEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHIVIQEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHSEYTCILSCDTGGAVAARADPRERPHEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHSEYTCILSCDTGGAVAARADPRGRPHVRDGPVRAHGRAAAGAGGGGATRHAHRSWWRRRNKARTVSTHASSVVIQEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHIVIQEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHIVIQEALSLHVRIHAGDRTCVTDLCALTAALQLELVAAAQQGTHIVIQEALSLHVRIHAGDRTCVTDLCALTAALQPELVAAAQQGTHTRMLVLLVSESLTARRTPTFAYDPDGTNGLKCIPKHSLRPTLLDLADQPIQIISSNPNNNVVHTQVIATNHHVTPRPKMHFCGECGKGFAAKHGLLAHQRRHPDGSCTLRTHVCECGKAFFQKNHLMLHQRQHMDLPTRNSQQQQQQQQQQQQQQQAQAAAQQAAQQAAQQVEQQVQQQVQQQVQQQVQQQHHQNSLEIEQDHQQPTHIQVVNRSGQVIGNQIVVGGVRGRLVTPHVHILGRDAKHLAHSKHHAHRHHTARSYTASTDRLLYLYRSYTASTDGLQHSYKHDKLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -