Basic Information

Insect: Petrophora chlorosata
Gene Symbol: Hivep1
Assembly: GCA_951640565.1
Location: OX621219.1:3534945-3544124[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.11 9.7 7.7 1.4 1 23 219 242 219 242 0.95

2 11 0.17 16 7.0 0.4 1 23 248 270 248 270 0.98

3 11 0.028 2.6 9.5 0.7 1 23 274 297 274 297 0.95

4 11 0.12 11 7.5 3.9 1 23 310 332 310 332 0.97

5 11 1.3e-05 0.0012 20.0 0.1 2 23 337 359 336 359 0.97

6 11 0.056 5.1 8.6 3.4 1 20 366 385 366 386 0.95

7 11 0.0044 0.4 12.1 5.4 3 23 397 417 396 417 0.97

8 11 0.00036 0.032 15.5 0.2 1 23 428 451 428 451 0.93

9 11 2e-06 0.00018 22.6 1.8 1 23 457 480 457 480 0.96

10 11 4e-05 0.0036 18.5 0.2 3 23 491 511 490 511 0.98

11 11 0.26 23 6.5 3.6 2 23 518 540 517 540 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.11	9.7	7.7	1.4	1	23	219	242	219	242	0.95
2	11	0.17	16	7.0	0.4	1	23	248	270	248	270	0.98
3	11	0.028	2.6	9.5	0.7	1	23	274	297	274	297	0.95
4	11	0.12	11	7.5	3.9	1	23	310	332	310	332	0.97
5	11	1.3e-05	0.0012	20.0	0.1	2	23	337	359	336	359	0.97
6	11	0.056	5.1	8.6	3.4	1	20	366	385	366	386	0.95
7	11	0.0044	0.4	12.1	5.4	3	23	397	417	396	417	0.97
8	11	0.00036	0.032	15.5	0.2	1	23	428	451	428	451	0.93
9	11	2e-06	0.00018	22.6	1.8	1	23	457	480	457	480	0.96
10	11	4e-05	0.0036	18.5	0.2	3	23	491	511	490	511	0.98
11	11	0.26	23	6.5	3.6	2	23	518	540	517	540	0.92

Sequence Information

Coding Sequence: ATGGCACAGTATATTGAAATAAACTCGCCTGTTTACGGCATAAGTTATTCCAATGCGAATACTACATTACAATCAAACCCGTGCGTTTGTTGTTTAGCTCAAAAGGAATTCATGATCAATCTGACAAAATGTAAACACAATGGCTTTTTACAAGAATATTTGGCGATGCCAAACCGAATAAATATATTGGTCTGCAATATTTGCCACGAAATgctaaagaaaatattaatgttCAAAAAGCAAGTAGAACAATCTAACaggatattaaaattaaaacaacagAAAACCACGAATACAATATTTAATCTGCAACAATCAGATACGACTATCACATCTACTCTCACCGACACAGAAGAAGAATCCGACTTAAAACTAGAGTCGGGATCAAACAGAGAAGACGTAGATGACTCAACCAATCCGAACTCCGCATTTGAAATAACGACTGACGTGAAAATAGAACACGAATGTTCCGATTTCGAAAACGACTTACCTCTGGCgcagattaaaaaaagaaagactaAACAAAAGAAACCGAAAGTTGCCAGTTTAGAAGAAAAATACGAGGGGAAAATAAGAGTGGTTTTTTTGAGTAACGAGGACGTAATGAAGGAAAGAGAGAGGCAATCTAAGAAAGAGTCTTATTTAAAACTGCCTTTCAAATGTGAGAGTTGTATCAAAGGATTTGATCATGAAATTACCTTGAAAAGCCATATTGAGAATAAACATGAGAAAGAAGGTGTATATCGGTGCTATATATGCAAGTCAGTGCTGGGCTCTGAGCCTTCGTTTAAGGAACATGCCAGGAGGCATGTGAGAAGATTTGAATGCGTCACCTGCGGTAAACGCACCACTGATATCTACTCCATATCGCAGCATTACAACCAACAGCACGGCGCCGGCGACGCATCGCATGGGATTACTATGCAGTTCAGTTGTGACCAGTGCGATTATACAACCGaTTCGCACCGTGCCTACCGCTACCACCGCGAGAAGCACAAGCAGAAGCAACAATGCAACATCTGTGGGAATACGTTCGTCAGCAGCGGCGGTCTCAGGGTTCACATGTACACGGTCCACAAACAATCCACACGAGTATACAAATGTTCATCCTGCGACAAAACCTACAAATGCAAGTCCGGCCTTTTCAATCACACGGCGTGCGCACACGGCGGATCGCAACGCGCGTACTGCGCTAAATGCAGGACACATTACGCAACGAAAAACAATCTGTTACATCATCTCAGGACGCATTCTGCGCATGTCACCGATGAGAACAAAAAATTTGTCTGCCACGAATGCGACGCCAAATTCCTGAACAAGTCGGCGTTGCAAGCGCACATAGACTGGGACCATCTCAAGACTGTCAAATACGAATGCAATAAATGCTCGAAAGTGTTCAAAACTGCCGTCACGTTGAAGAGACACACCAGATTCGTGCACGAGAAGAAAAGACCTCCAAGAGACAAGATCTGCGACTACTGTGGAAGAGCCTTTACTACGACTTCTATCTTGGTGTCTCATATCCGTACGCACACCGGCGAGCGTCCGTTGAAATGTACGCACTGCGCCGCTACTTTCGCCCACTGTGCTGCCCTCTATACTCACAACAaacttatacataataaataa
Protein Sequence: MAQYIEINSPVYGISYSNANTTLQSNPCVCCLAQKEFMINLTKCKHNGFLQEYLAMPNRINILVCNICHEMLKKILMFKKQVEQSNRILKLKQQKTTNTIFNLQQSDTTITSTLTDTEEESDLKLESGSNREDVDDSTNPNSAFEITTDVKIEHECSDFENDLPLAQIKKRKTKQKKPKVASLEEKYEGKIRVVFLSNEDVMKERERQSKKESYLKLPFKCESCIKGFDHEITLKSHIENKHEKEGVYRCYICKSVLGSEPSFKEHARRHVRRFECVTCGKRTTDIYSISQHYNQQHGAGDASHGITMQFSCDQCDYTTDSHRAYRYHREKHKQKQQCNICGNTFVSSGGLRVHMYTVHKQSTRVYKCSSCDKTYKCKSGLFNHTACAHGGSQRAYCAKCRTHYATKNNLLHHLRTHSAHVTDENKKFVCHECDAKFLNKSALQAHIDWDHLKTVKYECNKCSKVFKTAVTLKRHTRFVHEKKRPPRDKICDYCGRAFTTTSILVSHIRTHTGERPLKCTHCAATFAHCAALYTHNKLIHNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -