Basic Information

Insect: Petrophora chlorosata
Gene Symbol: -
Assembly: GCA_951640565.1
Location: OX621198.1:15997947-16013359[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.6 1.5e+02 4.0 0.3 2 23 6 27 5 27 0.96

2 14 0.024 2.2 9.7 0.1 1 23 1034 1057 1034 1057 0.92

3 14 0.84 76 4.9 0.1 1 23 1137 1159 1137 1159 0.95

4 14 1.7e-05 0.0016 19.6 3.6 2 23 1162 1183 1161 1183 0.97

5 14 0.0004 0.036 15.3 1.9 1 23 1189 1211 1189 1211 0.98

6 14 0.0093 0.84 11.0 2.9 2 23 1218 1239 1217 1240 0.95

7 14 7.3 6.6e+02 1.9 1.6 5 23 1253 1271 1251 1271 0.96

8 14 0.0039 0.36 12.2 2.0 3 23 1278 1299 1277 1299 0.97

9 14 0.0027 0.24 12.8 0.2 2 23 1316 1336 1315 1336 0.97

10 14 5.7e-05 0.0051 18.0 0.7 1 20 1342 1361 1342 1364 0.92

11 14 0.0031 0.28 12.6 0.6 1 23 1372 1394 1372 1394 0.99

12 14 0.006 0.54 11.6 7.2 1 23 1400 1422 1400 1422 0.98

13 14 9.6e-06 0.00087 20.4 1.4 1 23 1428 1452 1428 1452 0.97

14 14 0.0011 0.099 14.0 5.1 1 23 1458 1480 1458 1481 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.6	1.5e+02	4.0	0.3	2	23	6	27	5	27	0.96
2	14	0.024	2.2	9.7	0.1	1	23	1034	1057	1034	1057	0.92
3	14	0.84	76	4.9	0.1	1	23	1137	1159	1137	1159	0.95
4	14	1.7e-05	0.0016	19.6	3.6	2	23	1162	1183	1161	1183	0.97
5	14	0.0004	0.036	15.3	1.9	1	23	1189	1211	1189	1211	0.98
6	14	0.0093	0.84	11.0	2.9	2	23	1218	1239	1217	1240	0.95
7	14	7.3	6.6e+02	1.9	1.6	5	23	1253	1271	1251	1271	0.96
8	14	0.0039	0.36	12.2	2.0	3	23	1278	1299	1277	1299	0.97
9	14	0.0027	0.24	12.8	0.2	2	23	1316	1336	1315	1336	0.97
10	14	5.7e-05	0.0051	18.0	0.7	1	20	1342	1361	1342	1364	0.92
11	14	0.0031	0.28	12.6	0.6	1	23	1372	1394	1372	1394	0.99
12	14	0.006	0.54	11.6	7.2	1	23	1400	1422	1400	1422	0.98
13	14	9.6e-06	0.00087	20.4	1.4	1	23	1428	1452	1428	1452	0.97
14	14	0.0011	0.099	14.0	5.1	1	23	1458	1480	1458	1481	0.95

Sequence Information

Coding Sequence: ATGGATCAGCTGGTGCAGTGCCCCGTGTGCACGCTCTTCCTCCATAATGGAATGTCACTGGAGTCTCATCTGGACACGCATCCCAAGGACCAGGTTATAAAAGCTTTGTGCAGCATAGCAAACAAAAATACCAGTTGTGCAAGTAGTCGAGCATCCACCCCCGCTAACTCAGAGCGATCATACCGGAGCAGGTCTCAGACCCCGGCCGCTGAAGATAATGGACGTTGGAACGGCGCTCATAGAAACACAGAACATGAACGCTACTGGGCCAGGACGCCCAGCGGGTCGTCAAGTAGGGCCCCCAGTGGCACGTCCAGTAGAGCCCCGAGCCGAACACCCAGCAGAACTCTGAGCAGGACACCGAGCAGGACTCCCAGGTCCATTTCATCAGTGAATGTATCCCGTAATTGCACACCTGACATAAGAATGGTAGATAATCTTGCATTTGAAACCACAACAGTCAGCAGTTCCTCGCAGCATTCGAACCAATCTAGTTCAAATCTTTCAAATCCTTTGTCATTGAAGGCTGACAAAATGCAGCAAACTTATCACCCTCCCCCACCGGCAGTAGACTTTGAGCAGAAGTACATGTATTACCCAGATCAGCAAGAAGACAGAGAGATCAAATATTCCCGCAGTGCTGAGTACAATGCAATGAATGTGAATAATGTGTTTCCTTACAATGTGCCAACGATTGGGGCTGCTGGTGTTAAGTTACAGCCTAATTTAATACCACATGTGACTAGAAAGAGAAATGATCCTGTTAAAGTGATGCCAAAATCAAATAACCTGATGAACCTAGTTAAAAGCAACATAGCAGGGATGCCATACCTAGCTCCAGGTGTGAAGCCCCTGCATGTGATGGTGGGACCGTCGGCACCCACATTAGTTCAGAAGAATGTGCAAAACAGCATGATAATGACTGGTGCTCTTCCCAACTCTCAAATGCATATAAATACCAAGACTGTTCCTCCATCAGTTCAAAACCACTTCAACCAGCTAAGTTCTAGTACATTCACTCCTGGGACCACAGTGGTGACTCAGAACTCCCAGTACTTTTATCAGGAGATGGTGCAGAATATTGATCCTAAGACCTTTATTCCCAGTATGCCAACTGTCTTTACTGGTGAGAATGTGACAAACGTGGCTCAAACTAGCTCAATGTATCAGAATGTGATGCTTGTGGACCAATATGGTAATGCTTCATGTATGTATGCAACACCACAACAAATTATACCAAAACATAGCGCCCCTCAAACATTCACTGACACAAGTGCTCTTCTAACTAATGCTCAAAAACCTGGGTCTAACTTTGGAGATCAGAATAAAACTCTCATTATTGAAGTGGGTCCCCTCATGCCCCCCGTGCAAGTAAGTTCGTGTAGTAATTCTGCTAATAAGGTGTTGTCTCGACCTCGACAGGCTCCTTCTAACGTATCTAGTTTTACAGTACCAAAAGCTGAGGCTCCGAGCATTACAATTACTGAAAAGATTGAGACCCAAAGTGAAGCTCCAGGCAAAGGTAAGGGTCTTAAAATCCTAAGCAATATAAAAGTTGAAGTCCCGGTACAACAccataaaaatatgataaatactGTGATGGACCTGACAGGTTCTAATGATCCAGATTACTCAGACAGATCTGCATCTCCAGAAAAAATCTTGCCTGATTTGGAAGAAAATTTAAACAAGCAAAAAATGTCACATGATTTTACCCAGCCTTCTACAAGCAGAGGCGATAGCTCTCTTTCCTTTGCAGAGCTGAAGAAGATTGCAAGTCCTACCTCAAACAAAGACTCTTCTAGCAAAAGTAGCGTAGATAATAAATTAGACATGGAGTTTGGAGATAGCTGTCCTGTGCCAGATCTAATATGTAATGAGAAGCCTTCCATATCGCCGATCAGTGAGCTGTCGGAGAATGGGGACAACTCGACCGATCGTACCTCTATATCTCCCAAACCTCAAATTAAGAAACTTAGTAAAGAAGTAGAtagtaaagaaaagaaaattcaaTTGCCAATAAAGCCATTTAGAAGTACTCCACTAAGACTGAATAACATTTTCGTGAGGAAGAACAAGAAAGTTTTGCAGATAAAGAATTTGAAAGAGATCACTGAATCCAGCACAAGCAGACAAGAGAGTGAACCTATGCCGTGCTCATCGACGAGTATAGCGCCTTTAAGCTTTACTAACCAAGTTCAAAAGACTGAAAGTAAGCAGATGTCTACTTTGAAAACGATTTCAATAGAGGAGATTAAAGAGAAGGACGAACTGGCGGGGTTTGGTGCGAATCGGTCTGAATCTGCTCCCCCAGCGAAGGTGAAACCCAACCCGGAGATGGTACAAGTTAAAGAAGAAATCAGCTCGAGCAACGAGGGAGCATTTAGCAACGAGGGTCGGCCGGAGGAGATGGCGGCACTGGACCCTTTGCGGCCGATCAACGTCGTCAGCTACGGGAACATATCGCCCACAGACTTCGACGAGGAATCCAGCCATCGAGAGCTGTTAGACCTCGAAGGGACGGGGAAAACCAAACAGTTCGTCAACATGATGAACGAGAATTACTTCGGGGATAACATCTACGCGGATTACTTCACGCCAGATCGAGTCGAAGCGTTCGACGACAAAGGGCCTACAGTTTTTAAGGATAACGCCAAGGAAGCGTTTTCTTGCAACATTTGGGGCGAGCCGTCGACGAAGGAGAACGAGTTTGTGCTGCCGAATTTTATCCACGAGAGTTATAAGATTGCCGAGAGTGGGATGGATTATGCTGACGGGGATAAGGATGAGGCGATAGAGGGTGATGGGGGGGAGAAAGATAGCAAAGTGGACGTGCTGAGTGAAAGTCGAAGCGAGGGAGAGGCGCCGCTGAACATCTGCGCGGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGCGATATGGAATCTTCTTGGAATGGGGTGTATTCAGAGGTGACGCCAGCGGAGCCCTACGACCTGATAGCGCGCGAGAGCTGGGTCTCCGACGGTTCGGAGCTCGACGTCACCGAGAGGCGGGATACTCTGATAGAGGAAGTCCCCCACTTCCCGAAGGCTCGCATGTACACATGCTCCCAGTGCGGGGCAAAGCTCCCGTCGCTGAAGGAGCTGCGCGCGCACAAATCGGCCGCGCATGCGCTGCCAACATGCTCGTCGTACAGCCGTATGGTCACCGCCACCGCCATCAAGAAGGAGGAGAAACTGGAGGAAAGCAGCTTGTCTTGTGCAGCGAATATTCTAACGTTGGACTCAAAAGATGCCATCACGTCGACCATCCTGCAAGTTTACGAGACCATAGAGGAGAGTAAACCGAAGCTGTCAGCTGATCTTCGCGGGCTGCTCAAACAGGAGACTAAGCGAAGGAGGAAGGACTTCGTCTGTCCCACTTGTAAAGTTGACCAGGTAACGGACGCCGCGTTCACGGCACATCTCCGCACGCACCCGCTCGAGTGCCTCAAGTGCGGCAAGTGCTTCTTCCGCCGCGCCAACCTCAAGCTGCATCTCAAGACGCATCTGGGAATCAAGAACTACAAATGCGAGATCTGCGAGAAGCGGTTTGTGACGCGGCAGAAGCTTGGCGAGCATCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACGCTCTGCCCCGACACCTTCCGCCGCTACTCCAACATGGTTCAGCACAGGAATCGGCACCACTACCACAAGCGTGCCAAGGTGCGCGACTTCGTGTGCCACTGCGGGCTCGTGCTGCACTCGCGCGCCAAGTTCGCGTGGCACCAGGAGACGCACGACGAGCGGCCCAAGGCGTGCGCGCACTGCGGCGACAAGTTCGTGCACGCCGCCAGCCTCACGCGCCACGTGCGCCGCAAGcacgccgccgcgcgcctcgcgcagccgcccgccgcgcgcgcgcgcgaCGTGCCCTGCCCCATCTGCAAGCAGGTGTACCTCCGCTCGAACCTGCGCACGCACCTGCTGACGCACAGCGGCAAGCGGCCCTACTCCTGCGTCATCTGCAACAAGGCCTTCACCACCAAGTGGAACCTGAAACTGCACCGCTGGACGCACGTGTCCCGCTCCGCTAAGCCCTTCAAGTGCTCGCTCTGCAAGGGCGCCTTCGTTCGCCTCACTGAATACGTCTCCCACATGAATTCCCACAAGTCCGTCCGGCCTTACACGTGCAACTACTGCGGATGCCAGTTCATACGGAAATACAACTGCCAGCGTCACGTGAGGGAACACGAAACTGCGAAGAAGTTTGTGTGTAAAGTGCCTGAATGCGGCAAATCGTTTCACAGGAGCTATTACTTGTCGGAACATATGAAGGTCCACAGCGGCGCGCGTCCGTTTTCTTGCAACATATGTGGGAAGACGTCGAGCAACAAATCCAATCACAACAAGCATGTGAAGATACATCACGCGCGGGAGCCGGTCGCCACTGAGGCGTAG
Protein Sequence: MDQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSIANKNTSCASSRASTPANSERSYRSRSQTPAAEDNGRWNGAHRNTEHERYWARTPSGSSSRAPSGTSSRAPSRTPSRTLSRTPSRTPRSISSVNVSRNCTPDIRMVDNLAFETTTVSSSSQHSNQSSSNLSNPLSLKADKMQQTYHPPPPAVDFEQKYMYYPDQQEDREIKYSRSAEYNAMNVNNVFPYNVPTIGAAGVKLQPNLIPHVTRKRNDPVKVMPKSNNLMNLVKSNIAGMPYLAPGVKPLHVMVGPSAPTLVQKNVQNSMIMTGALPNSQMHINTKTVPPSVQNHFNQLSSSTFTPGTTVVTQNSQYFYQEMVQNIDPKTFIPSMPTVFTGENVTNVAQTSSMYQNVMLVDQYGNASCMYATPQQIIPKHSAPQTFTDTSALLTNAQKPGSNFGDQNKTLIIEVGPLMPPVQVSSCSNSANKVLSRPRQAPSNVSSFTVPKAEAPSITITEKIETQSEAPGKGKGLKILSNIKVEVPVQHHKNMINTVMDLTGSNDPDYSDRSASPEKILPDLEENLNKQKMSHDFTQPSTSRGDSSLSFAELKKIASPTSNKDSSSKSSVDNKLDMEFGDSCPVPDLICNEKPSISPISELSENGDNSTDRTSISPKPQIKKLSKEVDSKEKKIQLPIKPFRSTPLRLNNIFVRKNKKVLQIKNLKEITESSTSRQESEPMPCSSTSIAPLSFTNQVQKTESKQMSTLKTISIEEIKEKDELAGFGANRSESAPPAKVKPNPEMVQVKEEISSSNEGAFSNEGRPEEMAALDPLRPINVVSYGNISPTDFDEESSHRELLDLEGTGKTKQFVNMMNENYFGDNIYADYFTPDRVEAFDDKGPTVFKDNAKEAFSCNIWGEPSTKENEFVLPNFIHESYKIAESGMDYADGDKDEAIEGDGGEKDSKVDVLSESRSEGEAPLNICADERMPPRGELSGQESNGDMESSWNGVYSEVTPAEPYDLIARESWVSDGSELDVTERRDTLIEEVPHFPKARMYTCSQCGAKLPSLKELRAHKSAAHALPTCSSYSRMVTATAIKKEEKLEESSLSCAANILTLDSKDAITSTILQVYETIEESKPKLSADLRGLLKQETKRRRKDFVCPTCKVDQVTDAAFTAHLRTHPLECLKCGKCFFRRANLKLHLKTHLGIKNYKCEICEKRFVTRQKLGEHHNVHTGRAPVKCTLCPDTFRRYSNMVQHRNRHHYHKRAKVRDFVCHCGLVLHSRAKFAWHQETHDERPKACAHCGDKFVHAASLTRHVRRKHAAARLAQPPAARARDVPCPICKQVYLRSNLRTHLLTHSGKRPYSCVICNKAFTTKWNLKLHRWTHVSRSAKPFKCSLCKGAFVRLTEYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHETAKKFVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00056132;
90% Identity: -
80% Identity: -