Basic Information

Insect: Petrophora chlorosata
Gene Symbol: -
Assembly: GCA_951640565.1
Location: OX621195.1:14364507-14366413[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3e-07 0.00015 22.2 0.0 15 42 27 54 16 56 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3e-07	0.00015	22.2	0.0	15	42	27	54	16	56	0.88

Sequence Information

Coding Sequence: ATGGTCAACAAGTACAAAAGAAAAACTGCTAACGCATCATGGAGCGAGGAAACTATGAAACTCGCTATGGATGAAGCAAAAAAAACGTCCGTCAATGCAGCTGCAAAAAAATTTGGTATCAACTTGTCTACGTTGCAGAGACATATGAAGAAAGGATGCTCCAAAAAGGTACTTGGAAGATTTAAACCAGTTTTCACAGAAGCTCAAGAATTAGAACTGGCCGAGTATATTTTTCACATGGATAACCTGTTTTTTGGATtgacgaaaaaagaatttttggaATTAGTTTTCCAATatgctgaaaaaaataaaatcggtCATCCATTCAAAAGCAGGGCTGCGGGTGAAGATTGGTACATGGGCTTCAGGATGCGACATCCCGAAATAACTCTGCGTCGGCCAGAACCAACATCAATCGCACGCGCCAGAGGTTTTAATAGACCTCAAGTTGAACGATTTTTTGATTTACTTGAAGGAGAAATCGAGAAACACAATATCGATGCCACTAGGATCTATAATATGGATGAAACCGGTGTCCAAACTACAAGCAACAAACCTCCAAGAGTCCTATGTAGATCAGGAAAAAAACAAGTTGGCGTTATATCGAGCACCGAAAGAGGCAAACTGACAACGGTAGTATGCTGCTGTAATGCAGCGGGATCCTTTATACCCCCATTCCTAATCTATGGTCGTAAACGAATGGTAGGCAGACTTCTAGAAGGGGCTCCACCGGGGGCAAGAGCTACTTGCAGTGATAATGGATGGATCAACGGGCCAGTATTCTTGGAATGGTTGCGGCACTTCGTGGAGATGATAAGACCAACTGCAGAACAAAAAGTGATCTTGGTTATGGACAATCACGAGTCCCATAAGTACCTGGAGGCATTGGAATATGCGTCGAAAAACCATGTGATATTTGTTTCTCTTGCTCCGCACACAACGCATCGAATGCAACCGCTTGATACGTGTGTCTACGGGCCCTTAAAAAACTACTTCGAGCAAGCGGTTTCTGTGTTCCAAAAAACACACGTCGGACGCATTATTTCCCAATACGAGGTTGCGAAATTGTTTGGTGAAGCGTACATGAAAGCAGCAAGTGCTCAAAATGCAGTGAAAGGGTTCTCATGTACCGGAATATGGCCTACAAACAGGAACATCTTCGATGATTCTGACTACGTACCATCAAGTTTGACTGATAGACCAGAACCAACCCCTGATCCAGCCGATGATGAAGATAGACAACAAGCTGAAAGACGTGAATCCGGTGATTCTGATCGCACTGTGTCACCAACTGTTCTGGATCATTTAATTGGACAATCTAACTGCGAAACTCTAGTGCCGATGGTATATGACACAACTGAGTTAGTGACACAACAGTCAATAGAACATATGACTCCTGATAAGCAACAGTCAATAGAACATATGACTCCATATGAGCAAAATGAGACCCCTCTAACTCCAATTGCTATCCGGCCATTGCCCACACTagcacaaaataaaacaactcgAAAAAGGAGATCTCAACGTGCTGAAGTACTTACAAGTACTCCCATAAAAGAACAGCAAAGGGAAAAAGAAgcgaaaaaacaaaagaagacaGAGATAATAAAGATAAGGAAAAACTTAAAAGGTATGAAACCTTCAACTAGTATGAAAACACAGAAGAAAGGGGTGAAAAAAGGgccaaaaagaaacaaaaatgacACACATTATTATCGATGCCTAGTGTGCAACGAACTTTATAAAAATCCACCAACTGAAGACTGGATTAAGTGTAATGATTGTCAGATGTGGGCCCATGAAGCATGCACTGCTTATACAGGCAGAGGGTCATACTATTGTGACATTTGTCAAGAATAA
Protein Sequence: MVNKYKRKTANASWSEETMKLAMDEAKKTSVNAAAKKFGINLSTLQRHMKKGCSKKVLGRFKPVFTEAQELELAEYIFHMDNLFFGLTKKEFLELVFQYAEKNKIGHPFKSRAAGEDWYMGFRMRHPEITLRRPEPTSIARARGFNRPQVERFFDLLEGEIEKHNIDATRIYNMDETGVQTTSNKPPRVLCRSGKKQVGVISSTERGKLTTVVCCCNAAGSFIPPFLIYGRKRMVGRLLEGAPPGARATCSDNGWINGPVFLEWLRHFVEMIRPTAEQKVILVMDNHESHKYLEALEYASKNHVIFVSLAPHTTHRMQPLDTCVYGPLKNYFEQAVSVFQKTHVGRIISQYEVAKLFGEAYMKAASAQNAVKGFSCTGIWPTNRNIFDDSDYVPSSLTDRPEPTPDPADDEDRQQAERRESGDSDRTVSPTVLDHLIGQSNCETLVPMVYDTTELVTQQSIEHMTPDKQQSIEHMTPYEQNETPLTPIAIRPLPTLAQNKTTRKRRSQRAEVLTSTPIKEQQREKEAKKQKKTEIIKIRKNLKGMKPSTSMKTQKKGVKKGPKRNKNDTHYYRCLVCNELYKNPPTEDWIKCNDCQMWAHEACTAYTGRGSYYCDICQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01172302;
90% Identity: iTF_01172302;
80% Identity: iTF_01172303;