Basic Information

Insect: Petrophora chlorosata
Gene Symbol: clz9
Assembly: GCA_951640565.1
Location: OX621203.1:1663440-1665546[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.8e-09 1.9e-06 28.3 0.0 1 43 14 57 14 59 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.8e-09	1.9e-06	28.3	0.0	1	43	14	57	14	59	0.91

Sequence Information

Coding Sequence: ATGCCGCGAACttatataagaaagaaaattaaatcatACACTCCCCAAGATTTAGCACAAGCGATCGTAAAGGTAAAAAATGGAGAACTTACGCAATATAGAGCAGCGCAAGAGTACAAAATTCCAATGACGACTCTTCATGATAACTTAAGAAAAGGTAAAGAAACTGCCAGACCAAATGCAGGTAGGCCAACTGTTATACACCTAGAAGATGAGAAAAAATTAGCGGAAACTGTCAGAATTTTGGAAAAATGGGGATATGGTCTGTCTAGGTTTGAAATTATGGAGATTGTCGGTGAGTATGTGCGAGTAAATAAGAATCAAACACCTTTTAAAAACAATGTCCCAGGCACAGACTGGTTCATTAATTTCCGGAAACGACATAAATTGTCAATTAAAAAAGCACAGCCTGTAGAATTtgtaagaagaaaaatgacagATCCATTCGTCATTGGTGAATATTTCGATTTGCTGGAAAATACTTTAAAAGATTTGGATCTTTTTCAAAGTCCTCAACTCATTTGGAACTTAGATGAAACGTCATTATGCCTGGATCCATCCAGAACAAAAGTTGTTGGACAAATAAACAAACCTTGTGCGAGGACCACCCATGGGAGTGGAAAAGAGAATATCACCGTGTTGACAGGCGTAAGCGCCAGTGGCAAGAAGTTACCACCTTTGATTGTATTTAAAGGCAAATTTGTTTGGGATCAGTGGATGGCTGAACTGGATGGTAATTACGATTTCGAATTATCGTATGCAGACAGTACTAAAGGGTGGATGGAAACAGAtattttctataattatatagaaaacgtTCTTATTCCAAGTCTGGGCGAGGAGCGCCCAGTTCTTATTGTTTATGATGGTCACTCAACTCACGTCCATGTAAGAGTTGTGGAGCTCGCAATACGAAACCGTATCACAATTCTTAAATTACCACCACACACATCACATTTGCTGCAGCCTCTTGATATAGCAGTATTCAAGTCATTCAAGTCAATATGGGATGCCAAGTTGGTGGAGTGGCAGCGTAGAAATATTggcataaaaatgccaaaaaaagTTTTTGCTCAAGCGCTGGCAGATACTTGGCAAGAAACAAACCCCGATATAATCAAAAGTGGATTTAGAAAAGCTGGGATTTTCCCTTTTAATGCGCAGGTGATACCTGTGGACAAGTATGATCCAGATGCATACAAAAGGTATCAAAAAAAGTTATCAGAAGAACATTTTGCTTCCATACAACCGACACCGAAAAACCCTAAGACACTACAAGAAATTTGTATTGGCTTGTTTAACAATAAACTTACGACAACTAATGATGCTTTTGAAAATGCAAATACCGATGACGTTACCTTACTGTCAAAAATTTCAAAGTCTAATATCCAAACTTTAAGTTTTGTGGCCAAACAGCCAACCCAAGTACCTGTATGTTTACAGAAATCCTCAAACTATGATAAGGTTACCTTGCTGTCTCAGAATTCTAATCAAACACCAACTCaaaatttgacaaaaataaaaataatctcgAACGTTATCATCAAAAAAGCACCTCAAGAGTTACTTCAAGCTCAACCACTACCTGAGCCATCATGCACATTCGAAGAATTgcttttaagaaaaataaaacaggacaataaagataataaacCGACAAAAAAGAAACGTGTGACTAAAGGTGCTGAAGTGATAACTGCAACAATGGGTAAGAAAATTTTAGAAGAAACGATAAAACCTAAGAAAGCGATAGCAAACCCccgtaaaattaacaaaaaaagagCAACTATGGTAAATAAGGAAGATTctgaaataacaatatttacaGGACAACAACAAGAACAACAGCCAGGCCCTTCAGGcataagaaataagaaaaaacgAAAACGCCAGCTTTCATTGGACAGCATAACTAGTGTATCCGACATCATGAGCGAACATAGTGATTCTGATATTATTGAATGTGTTGATTTTGAAGAATTGACGGATGAATACTCTGAAAATGATTTttcaatatacactcgagagcaatga
Protein Sequence: MPRTYIRKKIKSYTPQDLAQAIVKVKNGELTQYRAAQEYKIPMTTLHDNLRKGKETARPNAGRPTVIHLEDEKKLAETVRILEKWGYGLSRFEIMEIVGEYVRVNKNQTPFKNNVPGTDWFINFRKRHKLSIKKAQPVEFVRRKMTDPFVIGEYFDLLENTLKDLDLFQSPQLIWNLDETSLCLDPSRTKVVGQINKPCARTTHGSGKENITVLTGVSASGKKLPPLIVFKGKFVWDQWMAELDGNYDFELSYADSTKGWMETDIFYNYIENVLIPSLGEERPVLIVYDGHSTHVHVRVVELAIRNRITILKLPPHTSHLLQPLDIAVFKSFKSIWDAKLVEWQRRNIGIKMPKKVFAQALADTWQETNPDIIKSGFRKAGIFPFNAQVIPVDKYDPDAYKRYQKKLSEEHFASIQPTPKNPKTLQEICIGLFNNKLTTTNDAFENANTDDVTLLSKISKSNIQTLSFVAKQPTQVPVCLQKSSNYDKVTLLSQNSNQTPTQNLTKIKIISNVIIKKAPQELLQAQPLPEPSCTFEELLLRKIKQDNKDNKPTKKKRVTKGAEVITATMGKKILEETIKPKKAIANPRKINKKRATMVNKEDSEITIFTGQQQEQQPGPSGIRNKKKRKRQLSLDSITSVSDIMSEHSDSDIIECVDFEELTDEYSENDFSIYTREQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01153845;
90% Identity: -
80% Identity: -