Pchl024040.2
Basic Information
- Insect
- Petrophora chlorosata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951640565.1
- Location
- OX621211.1:3305044-3306556[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-14 6.7e-12 45.8 0.0 1 41 30 71 30 75 0.92 2 2 1.9e-18 9.7e-16 58.0 0.0 1 43 237 280 237 282 0.95
Sequence Information
- Coding Sequence
- atgTCACCCcaacatggtggacgttccatCTATcgATTGAAACGCGCCATCCTAGACGGAGCAGGCAACAGTTCAAAACGTAACTATACCGAAGATGAACTCCAATCCGCACTGCGGGATATCCAAACTGGCAAGCTGGGTACCCGCCGTGCCTCCGTGGTCTACGGTATACCGCGGTCAACCCTCCGGAACAAAGTCAACAAGTTCGGCCTCACCACGGGCCCCCACGAATCAGACCCTGACAGCGACCCAGAAGGAACCGATTCCCCGCCTTCCGTCATCCTCAAAATACCGACCTTCCCCCCACCGGACGACAAAAGCTCTTCTCCTGCCACGTCAGTCACGACACCTATTACACCCATCACACCAATGCTTTCGTCGCAGTCGCAGCTGAACCCACCTTCTCAGCTACTCCTACCGCCATCAGTCTTCGCTGACCCTCCGTCATCTCAGCACCTATTCTCGCTCAGTGACGTCATAGCGAAAAGCATCAGCCAAAAATTCCAGCAGCCGCCCGACAGGTTGCAGCATTCCGACTTCATCATGAGAGCGCCTGAGAGACACGTCTCCGTCATCAAGACACCTCCCGACAATCAGAGGCATCAGTACCAGGGGCCCAGCAATTCCAGAGGGCAGCCGAATAACAACGGCCAGCCCGCTCCAGGCGGTAAGGGGACGAGACCCAAACGAGGGAAGTACAGGAACTACGACAGGGACAGTCTGGTGGAAGCCGTCAAAGCTGTTCAGAGAGGAGAGATGTCCGTACATCGAGCCGGGTCTTACTACGGCGTACCGCATTCCACTCTAGAGTATAAGGTGAAAGAGCGGCATCTGATGAGGCCGAGGAAACGCGAGCCAAAGCCGCAGCCGGATGCAAAGCCGCAGCCACCGAAGCCGCAGCCGCCGAAGCCCACTGCCAAGCCCTTCTCGAACGGGCTCAACGGGCCGGAGACGCCGGGCTACCCGCCTGGGTACCCGTTCTGGCCGGGCGCGAGCTTTGCCGCGCACCCGACGCAGGACTTGTACGCGTCGCATATGATGCGGAGGCTTCGAGAAGAGGTGCCGCCACCCGCAAACGGATCCTTCCTCGAGGGTATAATCCGGTCGAGCCTGGAGCGGCCCGGCGCGGCGCTGCTGCAGAGGCTGAACGAGCCGCGGCAGCCGATGCCGGAGTCGCCGAGCCTGCTACGGCGGCTGGCCGGGGAGCCGCCGGAGGAGGGCccaccggcgcggcggccgcgcaTCGGCAGCACGGACCGCCAGATCGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGGGCCGACAAGCTGCGGCCGCGGAACGGCacgccgacgccgcccgccggcgcCTCGCTgagcccgccgcccgcgccgcccgcgccccccgacCGCGCCTAG
- Protein Sequence
- MSPQHGGRSIYRLKRAILDGAGNSSKRNYTEDELQSALRDIQTGKLGTRRASVVYGIPRSTLRNKVNKFGLTTGPHESDPDSDPEGTDSPPSVILKIPTFPPPDDKSSSPATSVTTPITPITPMLSSQSQLNPPSQLLLPPSVFADPPSSQHLFSLSDVIAKSISQKFQQPPDRLQHSDFIMRAPERHVSVIKTPPDNQRHQYQGPSNSRGQPNNNGQPAPGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDAKPQPPKPQPPKPTAKPFSNGLNGPETPGYPPGYPFWPGASFAAHPTQDLYASHMMRRLREEVPPPANGSFLEGIIRSSLERPGAALLQRLNEPRQPMPESPSLLRRLAGEPPEEGPPARRPRIGSTDRQIAAEMREAVQRLRADKLRPRNGTPTPPAGASLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818280;
- 90% Identity
- iTF_00390304;
- 80% Identity
- -