Pchl022271.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Petrophora chlorosata
Gene Symbol
ct
Assembly
GCA_951640565.1
Location
OX621209.1:963658-983255[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.1e-27 5e-23 81.7 0.0 3 70 173 241 171 248 0.94
2 3 3.5e-32 5.8e-28 97.6 0.0 4 77 569 643 567 645 0.96
3 3 5e-31 8.2e-27 93.9 0.0 3 75 783 856 781 860 0.95

Sequence Information

Coding Sequence
ATGCTCCGTTCACTAGAGCTAGGCCCGAGTGAGCGAATCGAGCGAAAAGTGGAACGCTCGCCGAGTGCTGCGCCGAGCGTGCGAGAGGAGCGAAGTTCGATGGAGCGAGAGCGAAGTGCAGAGCGAAGAGACTTGAGCAATCAAGCGAACATGACAGACGCCGCGCGCATTAAAAATTCGCCGCGACGCGTGTTCCCCTCAACCCTCCACCACCCCCTCCTCGTGTTCCCGCGTAACCGTGCTCTCGCTGCAGGTGGCGAGGAGTGGCCGAGCACGCCGCCGCTCAACAACAACACGACGCACTACAACAACAACGGGCCCacgccgctgccgctgccgccgccgagCCCGTTCCGCTTCGACGAGCACCGACCCTACCGCTTCGCTGAAGACATGGGCCCCTTACCCCCCGGCGCCTTAGTAGGCCGCCTCGGAGACTCCCTTATCCCTAAAGGCGACCCCATGGAAGCGAGACTGCAAGAAATGCTTAGATACAACATGGACAAATACGCCAACAGCAATCTCGACACGCTTCATATCAGTCGAAGAGTCCGAGAACTCCTATCAGTCCATAATATCGGCCAGAGACTGTTTGCTAAGTACGTCCTGGGACTGTCACAGGGGACGGTATCAGAACTGCTTTCCAAACCGAAGCCCTGGGACAAACTGACTGAAAAAGGCCGAGACTCATACAGGAAGATGCACGCGTGGGCCTGCGACGAAGCCGCCGTCATGCTCCTCAAGTCTCTGATCCCTAAAAAAGTTGGGACCAAAGACGGTACCATAGGCCCTGGCTTCGGGCGGcccgacggcgacggcgacgaGCGCCTAGCCCACATCCTAGAAGCTTCTCACATGATGAAGACGCCCAGTCAGATCAACAACGATGACTCCAGGAGCAATGAAGACTCGAGCTCTCCTAGGACGCAATGCCAGTCGCCTTTCTCGAATAAGGACTCGAGCCAAAACAGAAGGATAAAGAAGTACGAGAACGATGACATTCCTCAAGAGAAGGTGGTGCGCATCTACCAGGAGGAGCTGGCCAAGATCATGAGCCGGCGGGTGGAGGACATCCGCCACAACCGAGAGGGGTTTCCTGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCCCCGCACATGGAGCGGCCGCCGGAGGACATCCGGCTGGCCCTGGAGGCCTACCACCGCGAGCTGGCCAAGCTTCAGCCGGGCGGGAACATTCCCCTCCACAGCCTGCCCGGTATGCCCCCCTTCCCGAACCTCTTGGCTCTGCAGCAGCAGGCGATGCAGGCCCAGACGCACCACAATGGCGCGCCCGCCGTGCAGGACCTGTCGCTCCCCAAGGACAAGAGCGCCAAGATGAACGGAATGACTGATAGCGATAAGGAACGGTCCATGGACGCCGAGGAGGCGCTCCGGCACGCGGGCAGCGCCTTCTCCCTCGTGCGGCCAAAGCTGGAGCCCGGCCAGTCCACCGGCTCCTCTGCCTCCAGCCCGCTCGGGAACGCCATCCTGCCGCCCGCCGCCACCCCCGGGGACGACTTCGGCGGCTCCGCGGCCGCCAGCCCTCTGCAGCGGATGGCGTCCATAACGAACAGCCTGATCTCTCAGCCCTCGAACCCCCCTCACCACCCGCAGCCTCAGAGGTCGATGAAAGCGGTGCTGCCGCCCATCACGCAGCAGCAGTTCGATCTCTTCAATAACCTGAACACCGAGGACATCGTCCGGAGAGTGAAAGAAGCGTTGAGCCAGTATTCTATCAGTCAGAGGCTATTCGGGGAGTCGGTGCTCGGGCTGTCGCAGGGGTCGGTGAGCGACCTGCTCGCGCGGCCGAAGCCCTGGCACATGCTGACGCAGAAGGGGCGGGAACCCTTCATCCGGATGAAGATGTTCCTCGAGGACGACAACGCGGTCCACAAGCTGGTCGCGTCGCAGTACAAAATCGCACCGGAGAAGCTCATGAGGACCGGGAACTACAGCGGAGCACCGACATGTCCGCCCAACATGAGCAAGCCGATGCCGCCGACGCAAAAGATGATCTCGGAGGCCACGTCGCTGCTGAGCAAGATGCAGCAGGAGCAGCTGCTGGGCCCGGCGCACCTGGCGCACCTGGCGCAGCCGTCGCCGCTGCTGCTGACGCCGCCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCGCCGCAGCACCACGACACCAAGGAGCGCAAGCCGCCGCCGCACGCCGCGcacgccgcgcacgcgccgcacgcgcaacacgcgccgcacgcgccgcacgccgcgccGGCGCTGCGCGGCCTGCACCAGCACCTGTCGCCCAGCGTGTACGAGATGGCGGCGCTCACGCAGGACCTCGACACGCAGACCATCACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCCGTGCTCGGGCTCTCGCAGGGCTCCGTCAGCGAGCTGCTCTCCAAGCCGAAGCCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTCAGCGACGCGCACAACATCGACCGCCTGCAGGCGCTCAAGAACGAGCGGCGCGAGGCCAACAAGCGGCGCCGCTCCAGCGGGCCCGGCCAGGACAACTCCTCCGACACCTCCTCCAACGACACCTCCGAGTTCTACCACTCCAGCTCACCCGGAccggccgccggcgccggcgcgggcgcgggcgcgcccTGCGCCAAGAAGCAGCGCGTGCTGTTCTCCGAGGAGCAGAAGGAGGCGCTGCGGCTCGCGTTCGCGCTCGACCCCTACCCCAACATGCCCACCATCGAGTTCCTGGCCGCCGAGCTCGGCCTGTCCACGCGCACCATCACCAACTGGTTCCACAACCACCGCATGCGCCTCAAGCAGCAGGCGCCGCACGGGCTGCCGGCCGAGCCGCCGGCGCGCGAGGCGGCCGCGCCCTTCGACCCCGTGCAGTTCCGGCTGCTGCTCAACCAGCGCCTGCTGGAGCTGCAGAAGGAGCGCCTGGGGCTGGCCGGCGTGCCATTGCCCTACCCGCCCTACTTCGCGGCCAACTCGGGGCTCGCGGCGCTCATCGGGCGCGGCCTGCTGCCGCCCGACGCGCCCAAGGACGGCGCCGGCCTCGACCTGTCCATGCCGCTGAAGCGCGAGCCCGACGCGGACGACTTCGAGGACGACGACGCGGACAGCGAGCTCGGCTCCGAGGGCTCGCTGGACGACGAGGCCAAGGCCGAGCCCAAGCAGGCCGCGCCGGCCGGCGGCGCGCTGGCGCGCTCCAGCCGGCGCaagcccgccgcgccgcagtgGGTCAACCCCGACTGGCAGGAGGACCGGCCGCGGCGCGCCGACGAGGTCATCATCAACGGCGTGTGCGTCATGCGCGCCGACGACTTCCGGCGCGACGCCGCCGAGACCGTGCGCGTGGAGCCCTCGCCCGTGCCGCGCGACGCCGAgcccgcgccggcgcccgcgcccgcgcccgcgcccgcgcccgcgcccgcgcccgcgcccgcgccgccgcgcccgccgcgcacgCCGCACCCGCCGCCGCTCGATGACGTCATCCCCGAGGACAGGATCAAGTCGGAGGCGGACGACGACCGGTGGGAGTACTAG
Protein Sequence
MLRSLELGPSERIERKVERSPSAAPSVREERSSMERERSAERRDLSNQANMTDAARIKNSPRRVFPSTLHHPLLVFPRNRALAAGGEEWPSTPPLNNNTTHYNNNGPTPLPLPPPSPFRFDEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGTKDGTIGPGFGRPDGDGDERLAHILEASHMMKTPSQINNDDSRSNEDSSSPRTQCQSPFSNKDSSQNRRIKKYENDDIPQEKVVRIYQEELAKIMSRRVEDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRLALEAYHRELAKLQPGGNIPLHSLPGMPPFPNLLALQQQAMQAQTHHNGAPAVQDLSLPKDKSAKMNGMTDSDKERSMDAEEALRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPAATPGDDFGGSAAASPLQRMASITNSLISQPSNPPHHPQPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPTCPPNMSKPMPPTQKMISEATSLLSKMQQEQLLGPAHLAHLAQPSPLLLTPPGFPPHHAVTLPPQHHDTKERKPPPHAAHAAHAPHAQHAPHAPHAAPALRGLHQHLSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPAAGAGAGAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPAREAAAPFDPVQFRLLLNQRLLELQKERLGLAGVPLPYPPYFAANSGLAALIGRGLLPPDAPKDGAGLDLSMPLKREPDADDFEDDDADSELGSEGSLDDEAKAEPKQAAPAGGALARSSRRKPAAPQWVNPDWQEDRPRRADEVIINGVCVMRADDFRRDAAETVRVEPSPVPRDAEPAPAPAPAPAPAPAPAPAPAPPRPPRTPHPPPLDDVIPEDRIKSEADDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01172217;
80% Identity
iTF_01172217;