Basic Information

Gene Symbol
-
Assembly
GCA_951640565.1
Location
OX621206.1:8043250-8067886[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.94 2.8e+03 -0.4 0.0 48 82 639 675 596 677 0.69
2 2 4.5e-15 1.3e-11 45.5 0.0 19 89 1594 1662 1581 1662 0.86

Sequence Information

Coding Sequence
ATGATGGTGCGTGCCCAGCGTAAGTTTGCGCACAGGGCCAGTATCCCTGAACCATCCTTTAAGGGGTTTGGTGCTGATAAACGCCCAGAGCCAGAGCATGCTGCACCCGCTCCTATGGTGCTGAATCCACCTATTAACGCTGCTATGCCTGTCAGGGATCTACTTGACCTAGTCGCCTTCCAAAATATTCACAAACACATGAATGATGACAAGCCAAAAGACCCTATCAAAGACGTTCGAGTTGTGTTGAAACGGCTATCGCCCGCGCCGGGTTCGGATGCCCCAGACCCTGTTTCACTTAAAGAAAGCCCACCAAGAGCCCTCCAAGTATCCTCTCGGAACCAAAACAATTTACCACGTCGGCCACTGATTCCCTCTCCACGACGGTCAGTACAGAAAAGAGGAAGTAAGTTCTTCATCAGGAAGCCAGCAAGTCGTTCATCAGCATTACCCGATTCAGAACAAATTGAAGGTCTAAAGCGAATGCATTTAAGAAATCGAACAATAAGCAGAGACTGGAAGTTAGCAAATATTGCGAAGAAAATAATGCAAGCAAAGCGCCGTCCTCGTCGCGTGAGCGTCACAGTACGTAAAGTGACCGCGGCCGCACGCAAAGTGAGCGTATCTGCACGTAAAGTTAGCGTACGTGCACGCAAAGTGAGCGAATCCTCACATCGAGTGAGCGAATCCTCACGTCGAGTGAGCGAATCCTCACGTCGAGTGAGCGAATCCTCACGTCGAGTGAGCGAATCCTCACGTCGAGTGAGCGAATCTCCACGTCGAGTAAATGAATCCTCACGTCGAGTGAGCGTATCCGCTCGTCGAGTAAGCGTGTCCGCTCGTCGCATAAGCGAAACTAGCACGGATGACAATCAACCCCTAATATACTTGACTAACAACTGCAAAGCCAATAACAACGTTAGTACAGACTGTACTCCAAAAGGCCCTCTCTCCGATATTCCGAAGAGTTCACCTCAAACTCGTAAAATTACCAATAACCCAAAGAAGTCACTAAGAAATGTGTCAACCAGACCTACACCATCCAAGTCATTTCTTACCAAAAAATCAACAGCTTCTCTCAAAAAGAAAGTATCGAATGTCAAACAAGGGAAAATAGTAAAGCGCCCTAATACAAAACAGTCACAGGCACTGCTTTCTAAAGCAAAAATTGCCAAAGAAGATAGTGACACTCTTACGGCGCAAAAACGAAAGTCCCCGCCACAAAGGCGTGTCACTCGATCTAGTTTCAGCGATGAAGATGCACCCCTCACAACTATCAGAGGTGCTTGTTCGTCTAATGTAGATAACTCCGCCTCAAGGAGTAAACCGGAAGTAAAATCGCTTAATTCTTCTCCTAATAAAAAAATGAGTTCTACACCTTCAACGTCTGGCAACATAATAAGGGGGTTGCAGGTAGAGCGGACACCCCAAGGCCACTTCAGGGTTATGCCCGACGAAACACTTTTAATAAGAACTACGTCGGGAAGAGTTAGAcctTGGCGTCCGGATAATTTGGAGTTAGGAGAAGGGATTCAGTTGGTGGAGGAAGAGGGTACAGAAAGGTCACAACTGAGACCACGTCGTCTTTTCGAAGATGATAATGAGgaTGAACGAGAAGATGCCTGTTTGCTTCCACCTTCACTCGCAGCGGCTCTCGAAGTTGTTGATTCAGGGAGTGAGGTGGACGACGAGGAATTGACTGTGGAGCAACTTCGAGAGCTTCTCGAAGGTGAAGACGAAGATGAAGAAGAAGTAGTATCATCAGTCTCTTTTACTTGGTCGGATGACTTTAATGAATTTAGGGGGGTAAGGGAAGTGTTCCAAGAAGAACCTGGCCCTAGAATTGAGGGAGCACGTCCAATTGACGTATTCACTCAATTATGGGACCAGCCTCTACTGGAAAGAATTGTCCAAGAAACAAACAGATACGCATGGAATTCTATTGCCACAGCGTCCGAACTTGGCATTAGTGCACAATCCCGAACGAATGCCTGGGTAGAGACGACAGTTGAAGAAATTTATCGCCTAATTGGCATTATGATTTTGATGGGGATGTGCGTCAGGGGGCGTGTAGACGAATATTGGTCTACCGGAATCTTAGGCATGCCTGGGTTCCGGACCTTGATGTCTAGAGACCGATTCTGCTTCTTGATGCACTTCCTCCATTTCGTAGATAATGATGAAATTGTATCCACAggcgaagaaaaaaaaataggaaaaattCAACCAATTGTCGATTATTTAAACGAGAAATACGTAGCCGTTTACACTCCTCGCCAAGAACTATCGATTGACGAATCGCTGCTGCTTTGGAAGGGACGTTTGAGTTGGTGGCAGAGTATCCGTTCCAAAGCAGCGCGATTCGGAATCAAATCGTATGAACTTTGCGAGTCTGTAACCGGCtacgtattaaaattaataatatataccggGAAGAGCTCCAACACGGTGGAAGCCGTTCATGGATTCACAAGTGCTAGCGCCAAAgctgttttaaaattaatgacgGGTTTCCTAAACAAAGGGTACACCCTTTTTATGGACAATTGGTATAATTCGGTGTCTCTTACaagatttttaaaaaacaataaaacagacgtcgtaggtactttaaataGGAGGAGAATCGAGACACCGGCCGACGTAAAATCGCTGGTTGATAAAAGAGTGGCAAGGGGATCCGTGGTAAGTAGACACTGTGGTGATGTTGCTGTTATGGCATGGAAGGATGTTAAATTAGTCACCACAGTGTCTACTTACCATAACAACGACATGACCACGGGTACGCGAGCcggacaaacaatacaaaagCCAGTAGTAGTATCAGACTATAATAAATTTATGGGCGGAGTGGACCTGAAGGACCAAAAGCTTGCCATGTATCTCCTAGAGAGGAAACGGGGAACCAAGTGGTACATAAAAGTCTTCCGCAGAttgataaatatttcaattttaaattcctACACCATTTTCATTTCGTCCAACCCTGACCAACGCATGACACATAGACAGTTTCGGTATAAACTGGCTGCAGAACTGGCTGAAAAGTACACCGTTAACGTACAGCCCAGGCAACGACAACCGACGACCATACCTGGTAGGCTAAACAAGAACGTTGACCACTTCCCTGAACACATCGAAGTCGAAGGGGAGCGGTCAGGTAAAACGCATCGCTATAAGCGAGCGCGTTGCGCCAGGTGCGTGGAACGGAACGCCGCTGAAAACCCACCACCAGTCCAAATTTCAGAAAAGAGAAGTCTGAAAGTCGATCTGTCGTCTGCTACAATTCGTCCACGACGAATCAGTAATCTGGTGAAACAGCAAAACTCGCAGAACTCAGTTACTCATTCTCGAGTAGGTCGTTCCCAGGCAGCTGATGATGGAGAAGTGGACGATGAACCCGAAGATGTCACCACTGGACTCGTAGACGAGAATACAGATCATAAAGATCTGTCTCTAGAGCGTGTGAAGGAGTGGCTAGTGAGTCACGCCAACCAGAGACCTCAAGCAAATCAGAGATCGCGACCAAACCGCGGGGCCCAAACCGAGTTCAAGATACCGGGCACCCCCGCGCCACGACGCCGCGATAAGGTGCTCCGCCCCTCACCCCCCGCAGCACCCGCCGCTGCCTCACCAGCCCCACTGTCCCCGGAAGAAGAAGAGCAGCGAAAACAATGTATCGCTTGGAACTACAAAGCAATGAAAAACATCGTCACAGATCCAAAGCTGATCAAACGCTTCTGCGCTGAATGCTCTCGATGCAAAATTATGTTCAAACCGCAGCTGGCTATCCCTGGACGACCTCCGAGATCGATCGCGAGCGGATCCGTTTCGGACGTGTACGATTTCGACGCGGAACGAGACGATGACCCGAGAACTGATGTCATCGCGCCATACAGAACCTCGAGAAGTGAAGAAAATCAGTCGTGTGACATCGGGAAACATGCAGCGTTCGTCAAAATCTCAAACCATCCCGACCATATGGAAAAGTTTAAAGAATTCCTGACACTTAAGGGCAAGAAAATACTTCGAGCAGCTACCATAATAAGTAACAATTTAGATGAGGGCGTAGCTCTTTTACCGAAGGACCAAACGGTTCTGGCCGAGGTGATAGGAATTTTGATAGAGTGTAACGCGAGTCGAGGAGACCAATCGACGGCGTCATTGTCGCCGCGACCTTCACTCGAGGGACAGACCGAAAACGATGTGAAAGAAATAccaaatataaaagaaatatcAGTTAAAAATGAAACGCCAGTCAAAAAAGAAGtgccaaacaaaaaagaaatgccaaataaaaaagaagttccaattaaaaaagaaattccAATTAAAAAGGACATTccagtaaaaaaagaaataccaaacaaaaaagaaattattaataaggaaCAGCAGCCGTGTGCCAGCTCGAGTCTGCGTCGTTCAAGTTCCGAAGTCGAGATACCTAGAAAGCGAACTCGGCAATCAAATAACGCGGCGATTCCTAAGTCACCGCCCATTCCTACCGACGCGGGTGAGATAAGAGAATCTCCTAAATTTTTCCCGACACCCGAAGAGTTCGAAGAGGGTCCGTGCAAGTACTATACCAAAATGTTAGTAAAACACCCGGACGTCGGTCTCTGTGGCATCAAGCCGCCTCAGAACTACAAGCCGACGTGTAACATCAACGACGCTCAGAGTAACTTCAAAATGACGAATCAGTACATCCATCGGATGCTGCAGCGCTGGGGGCCGGCGACACGAGAGCTGACTGCGATCAGGTCGATACAAGATCCGAAGATTCAGAAATCGCCGCTGTTCGAAGGCCTAGAAGTGGATTTAGTGAAACTTTTCCACACAGTGCAAGATGAAAACGGCATCGAGGCCTTCCAAAATGATGAGCAGAAATGGAGCGTCATCGCCGCAAAAATGGGCCTCTATCATCGAGGCAAGGCCACTTTGAAGCTTGAAAAGATTTATCTCAAATATCTTCTCGCTTACGACACATTGACTAAAGCGGAGCGCGCCGCAGCCAACACAGCTGTAGAGAAGTGCTGGCGAGCGAGacaggcgcgggcgcgggcgcgcgctCGCAACGCGCTGTGGCGGCAACAGCGCATGGAAGCCGGCGAGCCGCTcagcgacggcgacggcgacggcacCGAGCGGCTAGAGGCAGTCTGCGCCGAGGCGGAGGAGTGTGTCATACAGGGCCGGTTCTGCAACCTGAACACCTTCAAAAAGCTAGCGCAGCAAGTCCACGATATCTACTTCCCAAGTAACCCCTCGCCTTCTCCCGAGGAGGTCGAGGAGCAGTTCTGGAAGATCGTGATGTCTGGAAACTCCCACGCGTGTATACACGCCGCTTCTGTAGACACGTCCGAACATGGCTACGGGTTCCCAGCCGACCGCGCGGAACCCTACGGCGATCATCCGTGGAACCCCAAGCGTTTAAGCGTAAGCTCCACAAACCTGCTAAGCTACCTTGGCCCCACGATAGGAGTATCCTCGACTACCCTACACTACGGCATGACTTTCACAGTCAGCTGTTGGCACATGGACCCCACAATGGTGCCGTGGATCGAGTACCACCATCATGGGCCACCTAAAATATGGTACTCGATCTCAAGCGACCAAGCCGACGCTTTCCGCGCGGCCGTAGAAGCGCTCTGCCCCACCGCCGTCCAGAACAAAGACATCTGGCTCCCGAGCGACATCTGCATGATCCCGCCCCGCGTGCTGCGCGCGCGCGGCTTGCGCGTGGCGCGGCTCGTGCAGCGCGCCGGCGAGTACGTCATGGTGTACCCCAACACGTACAGCGCGTGTCTCGACACGGGGTACAATGTCACCGAAGGCGTGTACTTCGCGCCGCACGCCTGGCTCGACAACGCCGAGCGAGTCTTCCTGAACCTGCGCAGCAGCTGCGAGCCGGCGCTGTTCTCACTGGAGCGTCTACTGGTGTGCATGTCGCGCGCGCCGCGCACCCCGCCCGGCCTGCTGCGGCGCGTGCACGCCGCGCTGCCGGCGCTGCTGCGCGCCGAGCTCGGCTACCGGCAGCGCCTCGCCAGCCGCAGCGTCGAGCTCATGTCGCGCGAGGTGTTCCAGGAGCAAAACAAGCGCGCATCTGCTACTTCCTGGCAGATACAAGAGACGGGCGAGTGCCTCTACTGCCGCTGCACGATCTACCTGTCGAGGGTGATCGGCGTGACAGAGGGCCAGACGGGTGTCTGCGCGCGTCACGGCGTGGAACTATTCGAGTTGGCCGTGGCACGAGAAGGCACGGCGCAGCTGACTAATGTGTACTGCATTGTGCTTGTGAGCAACGCACAGATCTACGCCGCTCTCGACAGCCTCAAGTCACGTGTCCGGGGGGCGTGA
Protein Sequence
MMVRAQRKFAHRASIPEPSFKGFGADKRPEPEHAAPAPMVLNPPINAAMPVRDLLDLVAFQNIHKHMNDDKPKDPIKDVRVVLKRLSPAPGSDAPDPVSLKESPPRALQVSSRNQNNLPRRPLIPSPRRSVQKRGSKFFIRKPASRSSALPDSEQIEGLKRMHLRNRTISRDWKLANIAKKIMQAKRRPRRVSVTVRKVTAAARKVSVSARKVSVRARKVSESSHRVSESSRRVSESSRRVSESSRRVSESSRRVSESPRRVNESSRRVSVSARRVSVSARRISETSTDDNQPLIYLTNNCKANNNVSTDCTPKGPLSDIPKSSPQTRKITNNPKKSLRNVSTRPTPSKSFLTKKSTASLKKKVSNVKQGKIVKRPNTKQSQALLSKAKIAKEDSDTLTAQKRKSPPQRRVTRSSFSDEDAPLTTIRGACSSNVDNSASRSKPEVKSLNSSPNKKMSSTPSTSGNIIRGLQVERTPQGHFRVMPDETLLIRTTSGRVRPWRPDNLELGEGIQLVEEEGTERSQLRPRRLFEDDNEDEREDACLLPPSLAAALEVVDSGSEVDDEELTVEQLRELLEGEDEDEEEVVSSVSFTWSDDFNEFRGVREVFQEEPGPRIEGARPIDVFTQLWDQPLLERIVQETNRYAWNSIATASELGISAQSRTNAWVETTVEEIYRLIGIMILMGMCVRGRVDEYWSTGILGMPGFRTLMSRDRFCFLMHFLHFVDNDEIVSTGEEKKIGKIQPIVDYLNEKYVAVYTPRQELSIDESLLLWKGRLSWWQSIRSKAARFGIKSYELCESVTGYVLKLIIYTGKSSNTVEAVHGFTSASAKAVLKLMTGFLNKGYTLFMDNWYNSVSLTRFLKNNKTDVVGTLNRRRIETPADVKSLVDKRVARGSVVSRHCGDVAVMAWKDVKLVTTVSTYHNNDMTTGTRAGQTIQKPVVVSDYNKFMGGVDLKDQKLAMYLLERKRGTKWYIKVFRRLINISILNSYTIFISSNPDQRMTHRQFRYKLAAELAEKYTVNVQPRQRQPTTIPGRLNKNVDHFPEHIEVEGERSGKTHRYKRARCARCVERNAAENPPPVQISEKRSLKVDLSSATIRPRRISNLVKQQNSQNSVTHSRVGRSQAADDGEVDDEPEDVTTGLVDENTDHKDLSLERVKEWLVSHANQRPQANQRSRPNRGAQTEFKIPGTPAPRRRDKVLRPSPPAAPAAASPAPLSPEEEEQRKQCIAWNYKAMKNIVTDPKLIKRFCAECSRCKIMFKPQLAIPGRPPRSIASGSVSDVYDFDAERDDDPRTDVIAPYRTSRSEENQSCDIGKHAAFVKISNHPDHMEKFKEFLTLKGKKILRAATIISNNLDEGVALLPKDQTVLAEVIGILIECNASRGDQSTASLSPRPSLEGQTENDVKEIPNIKEISVKNETPVKKEVPNKKEMPNKKEVPIKKEIPIKKDIPVKKEIPNKKEIINKEQQPCASSSLRRSSSEVEIPRKRTRQSNNAAIPKSPPIPTDAGEIRESPKFFPTPEEFEEGPCKYYTKMLVKHPDVGLCGIKPPQNYKPTCNINDAQSNFKMTNQYIHRMLQRWGPATRELTAIRSIQDPKIQKSPLFEGLEVDLVKLFHTVQDENGIEAFQNDEQKWSVIAAKMGLYHRGKATLKLEKIYLKYLLAYDTLTKAERAAANTAVEKCWRARQARARARARNALWRQQRMEAGEPLSDGDGDGTERLEAVCAEAEECVIQGRFCNLNTFKKLAQQVHDIYFPSNPSPSPEEVEEQFWKIVMSGNSHACIHAASVDTSEHGYGFPADRAEPYGDHPWNPKRLSVSSTNLLSYLGPTIGVSSTTLHYGMTFTVSCWHMDPTMVPWIEYHHHGPPKIWYSISSDQADAFRAAVEALCPTAVQNKDIWLPSDICMIPPRVLRARGLRVARLVQRAGEYVMVYPNTYSACLDTGYNVTEGVYFAPHAWLDNAERVFLNLRSSCEPALFSLERLLVCMSRAPRTPPGLLRRVHAALPALLRAELGYRQRLASRSVELMSREVFQEQNKRASATSWQIQETGECLYCRCTIYLSRVIGVTEGQTGVCARHGVELFELAVAREGTAQLTNVYCIVLVSNAQIYAALDSLKSRVRGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-