Pfla020962.1
Basic Information
- Insect
- Perizoma flavofasciatum
- Gene Symbol
- ZBTB41
- Assembly
- GCA_958496245.1
- Location
- OY292448.1:4609540-4636280[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.017 1.1 10.3 0.9 1 23 89 112 89 112 0.90 2 19 0.017 1 10.3 0.8 1 23 145 168 145 168 0.96 3 19 0.34 21 6.2 0.2 2 21 181 200 181 205 0.92 4 19 0.0033 0.2 12.5 0.1 3 23 215 236 213 236 0.95 5 19 0.16 9.6 7.3 1.4 2 23 263 285 262 285 0.94 6 19 0.0041 0.25 12.2 1.3 3 23 303 323 301 323 0.88 7 19 0.021 1.3 10.0 2.9 1 23 329 351 329 351 0.92 8 19 1.2e-05 0.00075 20.2 0.1 2 22 357 377 357 377 0.95 9 19 0.016 0.98 10.4 0.8 1 23 704 726 704 726 0.96 10 19 0.0071 0.43 11.5 1.2 1 23 733 756 733 756 0.94 11 19 0.0017 0.11 13.4 0.4 1 23 787 810 787 810 0.95 12 19 0.016 1 10.4 0.2 2 23 850 872 849 872 0.95 13 19 0.0041 0.25 12.2 2.8 1 20 878 897 878 902 0.94 14 19 0.001 0.062 14.1 4.0 2 23 931 953 931 953 0.95 15 19 0.62 38 5.4 0.4 1 20 959 978 959 983 0.89 16 19 0.0053 0.33 11.9 2.6 3 23 1053 1073 1051 1073 0.94 17 19 2.1e-05 0.0013 19.5 2.1 1 23 1079 1101 1079 1101 0.98 18 19 7.1e-07 4.4e-05 24.1 1.2 1 23 1106 1128 1106 1128 0.97 19 19 0.0093 0.57 11.1 0.2 1 23 1134 1157 1134 1157 0.96
Sequence Information
- Coding Sequence
- ATGGAGAAAAAACAAACCACAGACGAGTCAAAGATCAAAAGAACAAAGCAGAGAAGACCACTAAAAGACCACAAAGAGTATGAGACGGTGTTCGACATCCAACTATTCGCGAATGAGGCAGAGGTTAGGCAGGAGTTTGCGGGAAGGAAGTCCTCTCAGCATTACCTCACAGCCAAGTATAAATGTGAGATCTGTTACACCGTTTATAAGTGTGAGAAACTGGTGAATTTCCACATGAAATGGCATGATCCGTCAGCGGGTGATTTCCCCTGCGACGTGTGCTCGATGCGGTTTAAGAGCTACGTCTCGATGCGTAAACACAAGACTGACGTGCACTTCGGACGGTTCCAATGCAAGAAATGTCCGCTCATCACCTACCACAATCACAGTTCGACATATATGTCACATTTGCGCAAGTCACACCCGACTGAGCATGTGTGCGTGACTTGTGCGCAGACATTCGTGTCTGAAAAGGGACTCACTGTTCATCGCAAGAAGGTCCATAATGCTTCGTCTAAGTTTGACGTTGACGGCACCGCTCGCTGCGAGGCGTGTGATCTCACTTTTGCAAACCAGCAAGTGTACACGGTTCATATCATGAACACAGACAAACATAAAGACATTGCTGATACACTTATAGCGTGCCCGGAATGCGGTCTGCAGTTCGATGATAAGTTGCAAGTCCGAGCTCACAGACGGCAACTACACCCGCAGTACAACTTCAGCGCGATGAAACGAGCTGAGAGCGGCGGCGAGCGTGCCCACACGTGCCCCCTGCCCGAAACCATGTGCTTTCAGTGTGGTTTATCGGGCACACACAACACCTGGCTGTACCGGCACTTCCAGTCGGCACACCCTGCGGAGTGCTACGAGCTGAGCGTCCGCAGCGAGCGCCGCAAGCATCTGTGCGACCAGTGTGGGAAGAGCTTTTATaatatAACTCAGCTGACTGAACACTCGTATGCACATGCGGGCCTCAAACCTTTCCGCTGCGACAAGTGCCCCGCCGCTTTCAGCTCCAAAACACATCTCAAATTCCATTCGGAGCGTCACGCACCACCTTCCCGGGAATGCTCTCAGTGCGGGAAGAAATTCGTCAGCGCCGCTAATCTCTCCAACCACATGCGGGTTGTTGTGAATCCAACTCTTAAGTTCTGTCCAATTTGTGAGCACCAGTTGAAGAAATTCTATGACTTTCGTCAGAAATGCAGGCATTCCAATGGAGTACTTCAAACATGGAGAGAAACAAATGCTCCAGAAAGCCCAGTAAATCTTCATGAGCTAGTCCCACAGCCATCTATCACTTTCCAAAAGGACAATGCTAAACTTGAATTGATGAAATTTCCGCACACAGACATAGCACATAGTGAATTgataataaaacttgaaaaagacGATTCAGTGGAAAAAGCTGACAATTCCACTGTCATAGCTGAAGAAATTAAACTTGATTCAGAgctaaatttacaaaataatggtcTACTGAATGCATCAAAGACTTTAGAAAGAAATGTTGACAGTATAGATTTGAAAGTCGAAGACAATTACTACTGTGAAGTTGACATTTTCAATgatgattttgatgatgatgatgattacgtGCCTGATAAAACCACAGCCAAAAGAAAAAGCACTAAAATCACTAAAACCAGAAGCAAAACCAAACTGGAACGAAAAGTCAAGCTGAAATACAAAGAGATTGATGAAGTAGAGAATGTTAAGGAAGAGTTAAAACAGGCTGACAGTGAAAAGGTCACAGAAAGAAGAAATAAGTTCAGCAAAAACCAATGCTATTTAAGAGATAGAGTGTTGGAGCTTCTGGACCGCGGAGAGCTTCAGGATTTGGGGGAAAATGTTAAGATGAGTCGAGAAGTATTTCTGAAGATGTTTGAAAAGTGTAAAAAGACTGGACTAAGGTGTACCATGTTGCCTATGAAACCAGACTCATCGGAGGAACATCAACGATTAAGAAGTTTCCTTCTATACCTGCTCAAGAAGAATAATCCAGAGTATGAAGACATGTTCCACATTGAGCTACTGGACACGGACGCTAAGAAACTGGCAGAGTTTAAGAGAAGGAAGCTAAGCAAGGAATATCTGGAAGCTGAGTTTAAATGCGAGATTTGCTTTAAAGTGTTTGAGGTGCTGAGACTGCTGGACTATCATAAGAAATGGCATGAGCCTAGCTCGGGTTCGCACGTGTGCTATATTTGCGCGATGCGCTTCGCCCGGCGCAAGTCTCTAGCGCAACATCTGAAGGACAACCATTGCACCGTCTACCGCTGCAAGTTGTGTCCCCTGCTCACATATAACTTTTCGGTGATGGTGAATCATTTCCATCACCACAAAGGAAAGGAGTATTCATGTCCTGTCTGTTTGAGTGTGTTCAGCAACAAAAGCACGATGAACAACCATCGACTGCAGGCGCACAAAACCTCTCATATCTGCGCTCTTTGTGCGCGCTGTTTCGTTTCAGAGAAGGGCCTGTACTTCCACAAGAGGCTGAAACACAAGGACGAAGTCGCGACAAAGTCCGAGCACAGTGTGTCGTGCGATAAATGTGACGCGACTCTCACGTCGCCGGAAGTACTTCACGCGCACATCCGCCAAATGCACAGCGCACAGACTATTCACAAATGTTTCCATTGCAAGGAAATATTTAGTAGTTTGGAAGAGTTGAAGAAACATAAAGTGGAACTGGATCACCAGCGATCGCCGAAACTGCCGCCATACAAAACTAACGGCGACGGTACTAAGACTGCGGTCTCGCTCAGTGCAGACGAGAAGCCGACTTGCGAAGAATGCGATAAATGCTTCAACTCTCGCAAAAGTTATCTCAGACACTTCAATGTCAATCACAACGTTAACAGAATTCACAAATGCGGCTTCTGTCAAGCAAAGTTCACGTCAGCGGAAGAGATAGACGCTCACAGAATTGCCTACAACCATCACCCCAAAGTGAGATATGTGAAAAAACTGAGGAAACATAACGCTGGCACGAAACGGCTGAAATGCAATAAACCCTTCGAGAAATGCGAATTGTGCGATGAGATGGTGTCGACCGCTCGCCACAACACCATGTATCAGCACTTCCAAGCGGCGCACCCCGATGTTCCGTACACGTCCGTGTATGCGAATCCGCATAACCGGCATCTATGCGAGGAATGCGGGAAGACATTTAAAGACCTAAGGTTCTTTCTGGACCACAAGAATCTGCATACAGGCGAGAAGCCATACCCTTGTAATCTGTGTTCACGAACATACGCCACTAAACGGCACTTGACATGGCACATGGAGCGACACGGCCCGCCTCGACACCAGTGCAAGGAATGCGGGAAGATGTTTAATAGTGCTGGTAACCTCTTCGCGCATAGACGGGGCCACGTCGGCGACCGACGCTTCAAGTGTGAGATCTGCGCTAAAGGGTTCCTCCACCAAGCAGCGTTGAACGAGCACGTGCGGGGCGTCCATAACCATATACGGCGGGCCAGGAAGTGCAGGGACAAGTGA
- Protein Sequence
- MEKKQTTDESKIKRTKQRRPLKDHKEYETVFDIQLFANEAEVRQEFAGRKSSQHYLTAKYKCEICYTVYKCEKLVNFHMKWHDPSAGDFPCDVCSMRFKSYVSMRKHKTDVHFGRFQCKKCPLITYHNHSSTYMSHLRKSHPTEHVCVTCAQTFVSEKGLTVHRKKVHNASSKFDVDGTARCEACDLTFANQQVYTVHIMNTDKHKDIADTLIACPECGLQFDDKLQVRAHRRQLHPQYNFSAMKRAESGGERAHTCPLPETMCFQCGLSGTHNTWLYRHFQSAHPAECYELSVRSERRKHLCDQCGKSFYNITQLTEHSYAHAGLKPFRCDKCPAAFSSKTHLKFHSERHAPPSRECSQCGKKFVSAANLSNHMRVVVNPTLKFCPICEHQLKKFYDFRQKCRHSNGVLQTWRETNAPESPVNLHELVPQPSITFQKDNAKLELMKFPHTDIAHSELIIKLEKDDSVEKADNSTVIAEEIKLDSELNLQNNGLLNASKTLERNVDSIDLKVEDNYYCEVDIFNDDFDDDDDYVPDKTTAKRKSTKITKTRSKTKLERKVKLKYKEIDEVENVKEELKQADSEKVTERRNKFSKNQCYLRDRVLELLDRGELQDLGENVKMSREVFLKMFEKCKKTGLRCTMLPMKPDSSEEHQRLRSFLLYLLKKNNPEYEDMFHIELLDTDAKKLAEFKRRKLSKEYLEAEFKCEICFKVFEVLRLLDYHKKWHEPSSGSHVCYICAMRFARRKSLAQHLKDNHCTVYRCKLCPLLTYNFSVMVNHFHHHKGKEYSCPVCLSVFSNKSTMNNHRLQAHKTSHICALCARCFVSEKGLYFHKRLKHKDEVATKSEHSVSCDKCDATLTSPEVLHAHIRQMHSAQTIHKCFHCKEIFSSLEELKKHKVELDHQRSPKLPPYKTNGDGTKTAVSLSADEKPTCEECDKCFNSRKSYLRHFNVNHNVNRIHKCGFCQAKFTSAEEIDAHRIAYNHHPKVRYVKKLRKHNAGTKRLKCNKPFEKCELCDEMVSTARHNTMYQHFQAAHPDVPYTSVYANPHNRHLCEECGKTFKDLRFFLDHKNLHTGEKPYPCNLCSRTYATKRHLTWHMERHGPPRHQCKECGKMFNSAGNLFAHRRGHVGDRRFKCEICAKGFLHQAALNEHVRGVHNHIRRARKCRDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -