Basic Information

Insect: Perizoma flavofasciatum
Gene Symbol: -
Assembly: GCA_958496245.1
Location: OY292447.1:4926759-4933825[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00034 0.021 15.7 1.5 1 23 55 78 55 78 0.96

2 25 0.062 3.8 8.5 0.1 1 23 174 197 174 197 0.94

3 25 3.9 2.4e+02 2.9 2.4 1 23 202 225 202 225 0.84

4 25 0.0053 0.32 11.9 2.6 1 23 231 254 231 254 0.97

5 25 5.3e-05 0.0032 18.2 0.3 1 23 261 284 261 284 0.97

6 25 0.00018 0.011 16.5 2.1 1 23 290 312 290 312 0.99

7 25 0.96 59 4.8 1.7 1 10 318 327 318 328 0.95

8 25 0.43 26 5.9 3.8 1 23 436 459 436 459 0.96

9 25 0.27 17 6.5 0.2 1 23 559 582 559 582 0.88

10 25 0.00019 0.011 16.5 1.2 1 23 588 610 588 610 0.98

11 25 0.0023 0.14 13.0 2.6 1 23 616 639 616 639 0.96

12 25 0.00018 0.011 16.5 0.2 2 23 647 669 646 669 0.96

13 25 6e-05 0.0037 18.0 2.9 1 23 675 697 675 697 0.97

14 25 6.9e-07 4.2e-05 24.1 0.5 2 23 704 725 703 725 0.97

15 25 0.024 1.5 9.8 1.7 1 21 731 751 731 752 0.96

16 25 0.025 1.5 9.8 1.6 1 23 955 978 955 978 0.94

17 25 0.24 14 6.7 0.2 2 23 1007 1029 1006 1029 0.93

18 25 0.26 16 6.6 0.6 2 23 1052 1073 1051 1073 0.96

19 25 0.0028 0.17 12.8 0.1 1 23 1077 1099 1077 1099 0.95

20 25 0.066 4.1 8.4 3.0 1 23 1104 1127 1104 1127 0.96

21 25 0.061 3.8 8.5 3.3 1 23 1236 1259 1236 1259 0.94

22 25 0.11 7 7.7 0.1 2 23 1286 1308 1285 1308 0.94

23 25 0.04 2.4 9.1 2.7 2 23 1331 1352 1330 1352 0.98

24 25 0.0091 0.56 11.2 0.1 1 23 1356 1379 1356 1379 0.90

25 25 0.062 3.8 8.5 1.3 1 14 1384 1397 1384 1407 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00034	0.021	15.7	1.5	1	23	55	78	55	78	0.96
2	25	0.062	3.8	8.5	0.1	1	23	174	197	174	197	0.94
3	25	3.9	2.4e+02	2.9	2.4	1	23	202	225	202	225	0.84
4	25	0.0053	0.32	11.9	2.6	1	23	231	254	231	254	0.97
5	25	5.3e-05	0.0032	18.2	0.3	1	23	261	284	261	284	0.97
6	25	0.00018	0.011	16.5	2.1	1	23	290	312	290	312	0.99
7	25	0.96	59	4.8	1.7	1	10	318	327	318	328	0.95
8	25	0.43	26	5.9	3.8	1	23	436	459	436	459	0.96
9	25	0.27	17	6.5	0.2	1	23	559	582	559	582	0.88
10	25	0.00019	0.011	16.5	1.2	1	23	588	610	588	610	0.98
11	25	0.0023	0.14	13.0	2.6	1	23	616	639	616	639	0.96
12	25	0.00018	0.011	16.5	0.2	2	23	647	669	646	669	0.96
13	25	6e-05	0.0037	18.0	2.9	1	23	675	697	675	697	0.97
14	25	6.9e-07	4.2e-05	24.1	0.5	2	23	704	725	703	725	0.97
15	25	0.024	1.5	9.8	1.7	1	21	731	751	731	752	0.96
16	25	0.025	1.5	9.8	1.6	1	23	955	978	955	978	0.94
17	25	0.24	14	6.7	0.2	2	23	1007	1029	1006	1029	0.93
18	25	0.26	16	6.6	0.6	2	23	1052	1073	1051	1073	0.96
19	25	0.0028	0.17	12.8	0.1	1	23	1077	1099	1077	1099	0.95
20	25	0.066	4.1	8.4	3.0	1	23	1104	1127	1104	1127	0.96
21	25	0.061	3.8	8.5	3.3	1	23	1236	1259	1236	1259	0.94
22	25	0.11	7	7.7	0.1	2	23	1286	1308	1285	1308	0.94
23	25	0.04	2.4	9.1	2.7	2	23	1331	1352	1330	1352	0.98
24	25	0.0091	0.56	11.2	0.1	1	23	1356	1379	1356	1379	0.90
25	25	0.062	3.8	8.5	1.3	1	14	1384	1397	1384	1407	0.88

Sequence Information

Coding Sequence: ATGTTGTGTCGAGGTGATCAAGAAGCTGAACTAGATGTCGGACGTGGAAAGCCAGAGTTCGCTAAAACTAACCCAGAAGAATTGCGAAAGCAAAGACAcaacttgagacaaatattactTTTCACGAATGCGACGCCAATATCACGCCACACTGATATGGGCTACGTATGTGGCTTCTGCTCAAAATGTTTCCAAAAACCTGCAGATCTCAAGAAACACACGCTAGTTATCCACGACAGTAAAACAAAGTCCACTTTCATGCATAAGACTTGCCTGTCCAGATTCCTGGTGAAACTTGACGTAACGAAACTTGAGTGTGTCATATGCGGTGATGGAATCAACTCCTTCACAGAAGTCATGGAACATCTCAGAGGTCATGGGAAAGTTTTACACCATGATTTGAAAAACTACATAATACCATTCGAGTTCGATTGCGACCTTCTTAAATGCATGTTTTGTTTCGAAGTGCACAGAAAATTTAAATCACTGCAAATACACATGTATGagcattatcaaaattttatttgtggGGTCTGTGGCGTAGGGTTCGTTAACAAAAATATGGTGTCCACACATTACCTCAACTCGCACGAAATCGGATCATTCCCATGCACTTATTGCGCGAAAATTTTCGATACGATCAATAAAAAGAAATCTCACGAGCATAATTCTCACGATCAGAAGAAAATGTACAAGTGCGGGTACTGCAATGAAAAGTTCAAGAGCTTCGATACGAAAAGGTTGCATCAGATGAGCGACCACGATGTTAAGACTCCCGCGTTCGAATGCAGCGCATGTAACAAAAGCTTTTCGAAACCATCGCTGTTGGCCATCCACGTTAAGAAAGATCATCTCATGGAGACGCGTTACAAGTGCACTTATTGCGAGAAAGCGTACTTCTTTCAGTTTCAATTGAACATCCACATGGTCACTCATACGCATGCGAAAGATTTCAAATGTGAAATCTGCGACAAACACTTTGgTATCGTCATCAGTGACGTCAAACCCATTAAACTGGAAATAGAATGGGACTTAGAAAAAAGAATGGAAATTAAGGCTACAAgtataaaagaagaaaaaaatgcaTCGAAAGGCACCCAAAAGAAAAAAGCAAATATCTCAAGACGGGCAGTAAATCGGAATAAGAAAGAACTAAGTTTGGAATCAGATGAATTCCAACCACTCAAAATCAAACCACCAGCGAAAGCTGAGCTTTTAGACGTGGACAAACATAGATATAACGTACGAGCGATCTTACAATATTCGAATGCTACACCGATCCGAGCGCACTACGCTGGGAATGGCTACGCATGCTGTTTCTGTAAACAGTATTTCCATAAAGCAGCAGAACTAAAGGCCCACACCTTACGAATACACGATGATCAAACCAAACGAAAATACATGCAAAAAGCCTTTCTGTTTAAGCTCTTTGTAAAGCTTGATATCACATCCCTGCGTTGTAGCATCTGCACAAACGAAATGTTAATCCTCGAATCTCTCGATGAACTTATCGATCATTTAAATTCTGCGCACCAAAAAGGCATTCACActgacataaaaaatcaaatcatgTGTTTTAAGTTAGACGAGGAAGTTTTTCGGTGTTTTATGTGTTCGGTCGAATATCACAGCTTTAAAAACTTGTTAGAGCATGCACATTCACACTACAGAAACTTCGTCTGTGAAATATGTGACGCTGGTTTCATCAATAGGTTGAAACTTTATGGGCACGTGTACAACAAACACAAAGGAGCGGGGTCTCATAAATGCGGTACTTGTGAAAAAGTGTTCGACACGCCTATCAAACTAAAGACGCATGAACGGATTCACGCCGGCACTGTACTTTACAAATGTCATGAATGTGGTGGAAAATTCTCGAAGAAGAAAGAGAAGCGGGATCACATGATAAATGTGCACGGAGCAGAATTCGCACGGATCAAATGCACAGCTTGTGACAAGATGTTTATCAGCAAAGCCTCCCTTAGCGTTCACATAAACAGAGACCATTTGATGGATAGACGGCATCAGTGTGAACTCTGTGACAAGACATTTTTCACGTCTTCATTTTTAAGGGATCATATGGTCTCGCACTCCAGAGTCCGGGAAATTCAGTGCGATGAGTGCCCCAAAACTTTTGCAAGAAAAAAAGCACTCCGTGAACACATGAAGTCGCACACTGGCGACCGCCGTTTCAAATGCACATACTGTGATATGGCTTTCTTGCAAAAGTGTAGCTTGAAGGGTCACTTGCgTGTCAACTTCAGAGACCTCAAAGCAATAAAATCGGAACTAGAGAACTCTTGGGGAGTAACTATAGTGAAAGTGAAAGGTTCAAAAGCTGACGAAACCCTAACAAAAGTTGACGATAGTAAACCTAAAACAATACAATCTAACAAACGCCAAATGAAATCAAACCGTCCACCAGGAAAGAGATTTAACATTGAACAGGTAACAGTTGACTGTCAGAAAACCTTCGAAGACCTAACGATGGTGGTAGATAAGAAACCGGATACTTCGAAATTGAGTAGACACTCAACAACAAAGAAAGTAACACAGAAATCTGATCaaacactaaaaataaaaatcaatccGCCACCAGACTTTGATTTTATGAACCCAATTAAAACGGCCGCATTATGCACAAAAACAGATACAAACCCATCTAAATTAAAACAACGAAGAAAAATCCAACCGTTAAAAAAGGAATCTCTGAAGCCACTGAACGCACCAGTTCAGAGAATCAAAATAATCCCACCCCCAGATATGGATTTTATGATGGAACTGGATAAGCACAGATTTAACATTCGGACTGTAATGCAAAATTCAAACGCCACACCAATCAGGAACCACGTCAAAAGCGGCTTCGTCTGCTGCTTCTGCGATGCGCACTTCCCCAAACCTGGGGACCTCAAGGTCCACACTATCCAAAGTCATGCTGACGATGATAGTAAAGACAAATTCTTTCGTAAGAAGGCTGTCTTGTACTCATTTATGGTGAAACTAGACATTACATCGCTAGTTTGCAATAACTGCCACGAGGCAGCAGACACTCTCGAGCAACTAATCGAACACCTCAACGACAAACATCAGAAAGGGTTGCACACAGACATAAAAAGTCACATCGTGTGTTTCAAATTCGACAGCGAAGTAATGAGGTGCCTCGTGTGTTTGTTAGAATTTAACAGCTTCAAGCTATTGTCGGAACATATGAACCAGCATTACACGAATTTCGTATGCGACGAATGCGGAGTGGGGTTCATTAATCGAAGACAACTCCTCCTGCACTCTGATAAACACAAAATGGGTGCACACAAATGTGGTTCGTGTGATAAAGTGTTTCAATCCTTGAAAAGGATGAAGACTCACGAGCGTATTACCCACGTGTACAATTCTGGACTCGgtaTCCAAACCAGACACCACAAAACCATTAAAACGGAACTAGATGTTTCGTGGGAAGTAACTATAGTAAAAGTTGAAGATACTTCAAACGTCGATAATAAATCTAGAACAACGCAAGCCAGAAAACGGCAATCGAAGATAAAGCCTCAAAAGCCAGACGAGATCTTGATTCAAAGAACGAAAATAAAACCATCAACAGATCACTGCCCGGAGACTTCAGAACTCGATAAACATCGGCATAACATTCGGACGCTATTGCAATGTTCAAACGCTACTCCGATCCGTACGCACTCCATCGCAAGCGGATACGTTTGTTGTTTCTGCAAAGCACATTTCTCCAAAGCTGCGGATCTCAAAACGCACACCATACAAGAACATGACGATGAAACTAAAAGCAAATTCATGCAGGGAACTACTCTGTTCACGTTCATGGTAAAACTGGACATAACTTCACTGAGCTGCAACATTTGTAGCATGATGACGAATACCATGGAGCAACTGGTCGATCATCTGAACAACGCTCATCAGAAAAGAATCTACACCGATATCAAAAGCTACATCGCCTGTTTTAAACTAGAAGGGGAAGCAATGAAGTGTCATATTTGTTCGGCAGAGTATAAGagctttaaatttttattggAGCACATGAACAAACATTCTACCAATTTTATTTGCGACGAGTGCGGAGCTGGCTTTATAAATCTAGGGCAGCTTCGCTACCACTCAGAAAATTTGCATATAGTGGGCGAGTACAAATGCGACACATGTGATAAAGTATTTCCATCATCAAAAAAGAAGTACTTCCACGAACGTGCCGCGCACTTTCAATCGTCGAAGAAGAGGTATGCCGACAAATAG
Protein Sequence: MLCRGDQEAELDVGRGKPEFAKTNPEELRKQRHNLRQILLFTNATPISRHTDMGYVCGFCSKCFQKPADLKKHTLVIHDSKTKSTFMHKTCLSRFLVKLDVTKLECVICGDGINSFTEVMEHLRGHGKVLHHDLKNYIIPFEFDCDLLKCMFCFEVHRKFKSLQIHMYEHYQNFICGVCGVGFVNKNMVSTHYLNSHEIGSFPCTYCAKIFDTINKKKSHEHNSHDQKKMYKCGYCNEKFKSFDTKRLHQMSDHDVKTPAFECSACNKSFSKPSLLAIHVKKDHLMETRYKCTYCEKAYFFQFQLNIHMVTHTHAKDFKCEICDKHFGIVISDVKPIKLEIEWDLEKRMEIKATSIKEEKNASKGTQKKKANISRRAVNRNKKELSLESDEFQPLKIKPPAKAELLDVDKHRYNVRAILQYSNATPIRAHYAGNGYACCFCKQYFHKAAELKAHTLRIHDDQTKRKYMQKAFLFKLFVKLDITSLRCSICTNEMLILESLDELIDHLNSAHQKGIHTDIKNQIMCFKLDEEVFRCFMCSVEYHSFKNLLEHAHSHYRNFVCEICDAGFINRLKLYGHVYNKHKGAGSHKCGTCEKVFDTPIKLKTHERIHAGTVLYKCHECGGKFSKKKEKRDHMINVHGAEFARIKCTACDKMFISKASLSVHINRDHLMDRRHQCELCDKTFFTSSFLRDHMVSHSRVREIQCDECPKTFARKKALREHMKSHTGDRRFKCTYCDMAFLQKCSLKGHLRVNFRDLKAIKSELENSWGVTIVKVKGSKADETLTKVDDSKPKTIQSNKRQMKSNRPPGKRFNIEQVTVDCQKTFEDLTMVVDKKPDTSKLSRHSTTKKVTQKSDQTLKIKINPPPDFDFMNPIKTAALCTKTDTNPSKLKQRRKIQPLKKESLKPLNAPVQRIKIIPPPDMDFMMELDKHRFNIRTVMQNSNATPIRNHVKSGFVCCFCDAHFPKPGDLKVHTIQSHADDDSKDKFFRKKAVLYSFMVKLDITSLVCNNCHEAADTLEQLIEHLNDKHQKGLHTDIKSHIVCFKFDSEVMRCLVCLLEFNSFKLLSEHMNQHYTNFVCDECGVGFINRRQLLLHSDKHKMGAHKCGSCDKVFQSLKRMKTHERITHVYNSGLGIQTRHHKTIKTELDVSWEVTIVKVEDTSNVDNKSRTTQARKRQSKIKPQKPDEILIQRTKIKPSTDHCPETSELDKHRHNIRTLLQCSNATPIRTHSIASGYVCCFCKAHFSKAADLKTHTIQEHDDETKSKFMQGTTLFTFMVKLDITSLSCNICSMMTNTMEQLVDHLNNAHQKRIYTDIKSYIACFKLEGEAMKCHICSAEYKSFKFLLEHMNKHSTNFICDECGAGFINLGQLRYHSENLHIVGEYKCDTCDKVFPSSKKKYFHERAAHFQSSKKRYADK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -