Basic Information

Insect: Perizoma flavofasciatum
Gene Symbol: -
Assembly: GCA_958496245.1
Location: OY292447.1:5389626-5401070[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 1.9 1.2e+02 3.8 0.7 2 23 28 50 27 50 0.88

2 35 0.06 3.7 8.6 0.5 2 23 75 97 74 97 0.93

3 35 0.0096 0.59 11.1 0.3 1 23 119 141 119 141 0.98

4 35 0.0013 0.078 13.8 1.2 2 21 146 165 145 166 0.92

5 35 0.53 33 5.6 1.8 1 23 199 222 199 222 0.91

6 35 8.2e-05 0.005 17.6 0.2 1 23 229 252 229 252 0.93

7 35 5.6e-05 0.0034 18.1 1.2 2 23 258 279 257 279 0.97

8 35 2.1e-05 0.0013 19.5 3.0 1 20 285 304 285 307 0.94

9 35 8.9e-05 0.0054 17.5 3.4 1 23 313 336 313 336 0.97

10 35 0.19 11 7.0 0.1 2 23 402 424 401 424 0.93

11 35 0.0099 0.6 11.0 0.4 3 23 453 473 451 473 0.96

12 35 0.00025 0.016 16.1 0.4 1 23 477 500 477 500 0.95

13 35 0.043 2.7 9.0 0.5 1 22 504 525 504 525 0.93

14 35 0.015 0.93 10.5 1.1 1 23 532 555 532 555 0.95

15 35 0.0012 0.072 13.9 1.3 1 23 562 585 562 585 0.95

16 35 0.083 5.1 8.1 1.5 2 23 591 612 590 612 0.93

17 35 0.45 27 5.8 0.4 2 23 690 712 689 712 0.93

18 35 0.35 21 6.2 0.4 3 23 738 758 736 758 0.95

19 35 0.025 1.5 9.8 0.2 1 23 762 785 762 785 0.95

20 35 0.0019 0.12 13.3 1.5 1 23 789 813 789 813 0.93

21 35 0.21 13 6.9 0.6 3 23 819 842 817 842 0.90

22 35 5.3e-05 0.0032 18.2 0.7 1 23 849 872 849 872 0.98

23 35 0.023 1.4 9.9 0.3 2 15 878 891 877 894 0.86

24 35 3.1 1.9e+02 3.2 0.3 2 23 916 938 915 938 0.91

25 35 0.13 7.9 7.5 1.0 2 23 964 986 963 986 0.93

26 35 0.98 60 4.8 0.3 3 23 1012 1032 1010 1032 0.95

27 35 0.00041 0.025 15.4 2.5 1 23 1036 1059 1036 1059 0.95

28 35 1.1 68 4.6 0.9 3 23 1198 1218 1196 1218 0.93

29 35 1 64 4.7 0.7 1 17 1222 1238 1222 1245 0.74

30 35 0.14 8.6 7.4 0.4 1 22 1249 1270 1249 1270 0.96

31 35 0.18 11 7.1 1.7 1 23 1277 1300 1277 1300 0.93

32 35 0.31 19 6.3 5.2 1 23 1307 1330 1307 1330 0.96

33 35 0.0033 0.2 12.6 0.6 1 23 1335 1357 1335 1357 0.96

34 35 0.00083 0.051 14.4 0.4 1 23 1363 1385 1363 1385 0.92

35 35 2.5e-05 0.0015 19.2 0.4 1 23 1391 1414 1391 1414 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	1.9	1.2e+02	3.8	0.7	2	23	28	50	27	50	0.88
2	35	0.06	3.7	8.6	0.5	2	23	75	97	74	97	0.93
3	35	0.0096	0.59	11.1	0.3	1	23	119	141	119	141	0.98
4	35	0.0013	0.078	13.8	1.2	2	21	146	165	145	166	0.92
5	35	0.53	33	5.6	1.8	1	23	199	222	199	222	0.91
6	35	8.2e-05	0.005	17.6	0.2	1	23	229	252	229	252	0.93
7	35	5.6e-05	0.0034	18.1	1.2	2	23	258	279	257	279	0.97
8	35	2.1e-05	0.0013	19.5	3.0	1	20	285	304	285	307	0.94
9	35	8.9e-05	0.0054	17.5	3.4	1	23	313	336	313	336	0.97
10	35	0.19	11	7.0	0.1	2	23	402	424	401	424	0.93
11	35	0.0099	0.6	11.0	0.4	3	23	453	473	451	473	0.96
12	35	0.00025	0.016	16.1	0.4	1	23	477	500	477	500	0.95
13	35	0.043	2.7	9.0	0.5	1	22	504	525	504	525	0.93
14	35	0.015	0.93	10.5	1.1	1	23	532	555	532	555	0.95
15	35	0.0012	0.072	13.9	1.3	1	23	562	585	562	585	0.95
16	35	0.083	5.1	8.1	1.5	2	23	591	612	590	612	0.93
17	35	0.45	27	5.8	0.4	2	23	690	712	689	712	0.93
18	35	0.35	21	6.2	0.4	3	23	738	758	736	758	0.95
19	35	0.025	1.5	9.8	0.2	1	23	762	785	762	785	0.95
20	35	0.0019	0.12	13.3	1.5	1	23	789	813	789	813	0.93
21	35	0.21	13	6.9	0.6	3	23	819	842	817	842	0.90
22	35	5.3e-05	0.0032	18.2	0.7	1	23	849	872	849	872	0.98
23	35	0.023	1.4	9.9	0.3	2	15	878	891	877	894	0.86
24	35	3.1	1.9e+02	3.2	0.3	2	23	916	938	915	938	0.91
25	35	0.13	7.9	7.5	1.0	2	23	964	986	963	986	0.93
26	35	0.98	60	4.8	0.3	3	23	1012	1032	1010	1032	0.95
27	35	0.00041	0.025	15.4	2.5	1	23	1036	1059	1036	1059	0.95
28	35	1.1	68	4.6	0.9	3	23	1198	1218	1196	1218	0.93
29	35	1	64	4.7	0.7	1	17	1222	1238	1222	1245	0.74
30	35	0.14	8.6	7.4	0.4	1	22	1249	1270	1249	1270	0.96
31	35	0.18	11	7.1	1.7	1	23	1277	1300	1277	1300	0.93
32	35	0.31	19	6.3	5.2	1	23	1307	1330	1307	1330	0.96
33	35	0.0033	0.2	12.6	0.6	1	23	1335	1357	1335	1357	0.96
34	35	0.00083	0.051	14.4	0.4	1	23	1363	1385	1363	1385	0.92
35	35	2.5e-05	0.0015	19.2	0.4	1	23	1391	1414	1391	1414	0.97

Sequence Information

Coding Sequence: ATGTCCATCGCAAGACGGAACGCGCGCACGATTCTTGAGAATTCAACTGCATACCCATTTAGACTCCCAGAGAGTTCATTGATGTGCGTATTTTGCTGCGAGAGCTTCTCAGAAGCAGTACTGTTCAGGCGACACATGGTCGAAGAACATAAGGACTTTAAAATACACATCGCATTTGCACATCTTTCGGAAGGATACCTTAAAGTCGACATTACAGATTTATGCTGTCGAATCTGCTCTTCGCCTTTCACCAGTCTCGATGAGCTAGCCATACATTTGACTAAAGTTCATTCCAAAAAGATTGATCTTGATGTCGATGTGGGATTACAGCCCTTTCGCTTGGaaaatgataaatttatttgccCGATATGTGAGCAAAAGGCTGCTAACCTCTGCGCTTTGAGTAGACACATTCAGAAACATTATCGGCTTTGCATATGCGAGCATTGCGGGAAAGCGTATGCTACGAACACGTCTTTGACATATCATGTAAAGAACTCGTGTACGAAGGATGGGCAAAGGCGGTGCAGGAAATGTAGAGTGGTTGTTAGTTCAATCGTGGAACATTTGAAAACTTCTGTTTTATGCAGACAACACATATGCAACGTGTGCGGGGATAGGTTCTCGACGTGGTTTAGAAAACATGCACACATGGAAGAGGATCACTCTTTACCCAAAAGAACCTTTCCGTGTCTTGAATGTGGCAAAGTCTTTAAATCGAATAATAGTTTAGCATCGCATTTTAGTATTGCCCATACTGATGGTTACCTTCAATGCGTACATTGCGGGATGAAATTTGTAAACAAGTACAAACTAGATCGACACATGATTGTGCATACTGGAGAAAAAGCCTTCGTTTGCAATGTGTGCTCTAAATGCTTCAATAGAAAGTCTACTTTGCGTCAACATATGTGGATCCACAGTGAAGTTAAAAAGCACGTTTGTAAGATCTGCGACAAACCTTTTAATCAGAAAGTCTGTTGGAAGGCTCATATGAAATCGCAGCACCCAGAGATGTATGATCTTTCTGGGTTGCAAGGCAAAAATTTGATTTGCGTTTACTGCTGCGACCGATTTGAAGACCCGGATGAGTACAGGTGTCATATGGATGAGACGCACAAGAAGGTCGATCTTTACACAGCTTTTGCGCACACTGGCAAAAGTAGAGGCAGAGACTACCTAAAGGTTGACTGCTTTAATTTGAAATGCAAGTTGTGTGAGGAGCCTTTCGAAACTGTCGCTGAAGTAGCTCAACACCTCAAGGATAGACATAATGAATATTCCAATATAAAAGATATGAACTTAAAATGGGAGGTGGGTTTGCACCCGTATCGATTAATCAAAGATAAATGGATCTGTATGGTGTGCAATATGAAACTGCCGACCTTGACCAAGCTAACACGACACATGTCCACCCATTACGCAGACTATGTTTGCGATATTTGTGGCAGGAGCTACATGAACATTGATAATTTGAAATACCACGTCAAGTTTAGCCACTCTGACAAATATCTCTGTAGAAAGTGTAAAAAAGAATTCCCCACTGCGGAAGAACGAAAGGAGCACCTAAAAACATCGAAGAAGTGCAGACCGTTTGCTTGCGTTCATTGCGGGGAGAGATTCTTTTCGTGGGAGCAAAAGCAGTTACATTTAATTAGCAAACACAATGTCCAGGCAGCGACGTACCCGTGTCCGGATTGTGAGATCGTTTTCAACTCGAGAAAACACTTCTACGACCATTACACTATAACACACTCTGATCAGGCACTCCAGTGCTCATGTTGTGAAAAAAAGTTTAGAAATAAGGGGCTGCTCGATGATCATTTGGTCATACACACAGCTCGTGTAATGGCGAAACGGAATGCTGAAGTTGTATTACAGTATTCCACACTGTATCCATTCAGGTTGCGAGGCAAAACCTTGATGTGCGTTTACTGCTGCGAAGAAATCGAAGATCCAGAAGAGTTTAGACACCATGTGGATGAGATGCACAAGTGTGCTGATATTGAGACAGCTTTCTTTCACCTGAAACAATTATACTACCTTAAGGTCGACTGTGTTAATTTGAAATGCAGATTATGTAGGGAACCTTTCATTACGGTCTCTGAAATAGCTCACCATTTAATGGATCgacatgataaaataaaagacaTGGACTTGAACTATGAAGTGGGCTTGCAACCCTACCGATTAATTAAAGACAATTTATTCTGCCTCATATGCAATATGAAACAGCCGAACTTGAATTCACTTGCAAGACACATGTCCACGCACTATATAAACTACGCTTGCAATGCTTGCGATAAAAGCTACATGTCAAAGGAAGGCATAAAAGCACATGTCCGGTTCAATCATTCAGCTAAATACATTTGTAGGAAGTGTAAGAAGGTGTTCCCTACGTCAGATGAAAAAAAAGAGCACCTCAAAACATCAACGCACTGCTGGGGCATCATGTGCAGTCATGGCGGTTGCACCGAAAGATTCGCCTCTTGGGATAGTAAGCAGAAACATTTAGTCAGCAACCACAACGTTCAACCTTTAACGTACCGATGTCCCGATTGTGAGATCGCATTTGAATCCAGGTCTCAGTTCTACCAACATTATAATACTTTGCATTCCGAACTAGCAGTTATGTGCTCCTATTGCGGAAAGAAGTTTAAAAaTCGTGATATGGCGAAACGGAACGCTGAAGTTGTGTTAAAGTATACCACACTGTATCCATTCAGGTTACGAGGCAATACCTTGATGTGTGTTTACTGCTTCGAAGAAATCGAAGACCCAGAAAAGTACAGACACCATATGGATGAGATGCACAAGTCTATTGATACTGATAAAGCTTTTTCGCACCTTAAGCAACTATACTACCTTAAGGTTGATAgtgttaatttaaaatgtagatTATGTAGGGAATCTTTCAATACAGTCTCTGAAATAGCTCACCATTTAATGGATCGTCATGATAAAATAAAGGATATGGACTTGAACTATGAAGTTGGCTTGCAACCGTACCGATTGATAAAAGACAATTGGTTCTGCCTCATATGCAACACCAAACAGCCGACCTTGTATAAGCTCACAATACACATGGCCTCGCACTATGTTAACTACGCTTGCAATGTTTGCGACAAAAGCTATATGAGAGAAGAATGCCTAAAAAGGCATGTCCGGTTCAGTCATTCAGCGAAATACATCTGTAGGAAGTCTCGTGATATGGCGAAACGGAATGCTGAAGTTGTGTTACAGTATTCCACACTGTATCCGTTCAGGTTGCACGGGAAAACCTTGTTGTGCGTTTACTGCTGCGACGAAATCGAAGATCCCGATGAGTATAGATGCCATATGGATGATATGCACAAGACAGTTGATTTATACACAGCTTTCGCGCACACGAAGTGCAGGGATAGAGACTACCTCAAAGTTGATTGCATCAATTTAAAATGCAGATTATGTATGCAACCTTTCGATACAGTCGCTGAAATAGCTCGCCATCTTACGGATCACcatgtaaatgtaaataaagaTATCAAAGACATAAACTTGAACTATGAAGTGGGTTTGCACCCTTACCGATTAGTTAAAGACAAATTGTTCTGCCTCGTATGCAATATGAAACAACCGACCTTGACCAAACTCACAAGACATATGTCCTCGCACTATGCAGACTACACTTGCGATTTGTGTGACAAAAGCTACTTAAACATTGAAAGCTTACGGTTCCACGTAAAATTTAGCCATTCGGAGAAATACATTTGTAGAAAATGCCTGACGGAGTTTTCCACTGCAGATGAAAGAAAAGAACACCTGAAAACATCTTCCAAGTGCTGGGGGTTTGCTTGCGTTCATTGTAAGGAAAGATTCCCTTCTTGGGAGCGTAAGCAGAAACATTTAGTAAGTAAACACAACGTGCAGGCTTCGACATACCCTTGTTCAGACTGTGGCATACTGTTCAAAACGAGGGTGCGCttctatcatcattatcataagACTCACTCTGATCTTGCCCACATATGCTCTTATTGCGGAAACAAATTTGGAAATAAAGGGCTACTTGATGATCACCTCCTCATGCATACCCATGAGAAGCAGTTCAATTGCACTGTTTGTGCAAAGGCGTTCGCTAGAAAGAAGGGATTACGAGATCACATGTGGACACACAGCGAGAAAAAGAGATTTCCTTGCATGATTTGCGATAGGACGTTTAGTCAGAAAATAAGCATAAATTCTCACATGAAAACAGCTCATCCGGAAttgtcaaaataa
Protein Sequence: MSIARRNARTILENSTAYPFRLPESSLMCVFCCESFSEAVLFRRHMVEEHKDFKIHIAFAHLSEGYLKVDITDLCCRICSSPFTSLDELAIHLTKVHSKKIDLDVDVGLQPFRLENDKFICPICEQKAANLCALSRHIQKHYRLCICEHCGKAYATNTSLTYHVKNSCTKDGQRRCRKCRVVVSSIVEHLKTSVLCRQHICNVCGDRFSTWFRKHAHMEEDHSLPKRTFPCLECGKVFKSNNSLASHFSIAHTDGYLQCVHCGMKFVNKYKLDRHMIVHTGEKAFVCNVCSKCFNRKSTLRQHMWIHSEVKKHVCKICDKPFNQKVCWKAHMKSQHPEMYDLSGLQGKNLICVYCCDRFEDPDEYRCHMDETHKKVDLYTAFAHTGKSRGRDYLKVDCFNLKCKLCEEPFETVAEVAQHLKDRHNEYSNIKDMNLKWEVGLHPYRLIKDKWICMVCNMKLPTLTKLTRHMSTHYADYVCDICGRSYMNIDNLKYHVKFSHSDKYLCRKCKKEFPTAEERKEHLKTSKKCRPFACVHCGERFFSWEQKQLHLISKHNVQAATYPCPDCEIVFNSRKHFYDHYTITHSDQALQCSCCEKKFRNKGLLDDHLVIHTARVMAKRNAEVVLQYSTLYPFRLRGKTLMCVYCCEEIEDPEEFRHHVDEMHKCADIETAFFHLKQLYYLKVDCVNLKCRLCREPFITVSEIAHHLMDRHDKIKDMDLNYEVGLQPYRLIKDNLFCLICNMKQPNLNSLARHMSTHYINYACNACDKSYMSKEGIKAHVRFNHSAKYICRKCKKVFPTSDEKKEHLKTSTHCWGIMCSHGGCTERFASWDSKQKHLVSNHNVQPLTYRCPDCEIAFESRSQFYQHYNTLHSELAVMCSYCGKKFKNRDMAKRNAEVVLKYTTLYPFRLRGNTLMCVYCFEEIEDPEKYRHHMDEMHKSIDTDKAFSHLKQLYYLKVDSVNLKCRLCRESFNTVSEIAHHLMDRHDKIKDMDLNYEVGLQPYRLIKDNWFCLICNTKQPTLYKLTIHMASHYVNYACNVCDKSYMREECLKRHVRFSHSAKYICRKSRDMAKRNAEVVLQYSTLYPFRLHGKTLLCVYCCDEIEDPDEYRCHMDDMHKTVDLYTAFAHTKCRDRDYLKVDCINLKCRLCMQPFDTVAEIARHLTDHHVNVNKDIKDINLNYEVGLHPYRLVKDKLFCLVCNMKQPTLTKLTRHMSSHYADYTCDLCDKSYLNIESLRFHVKFSHSEKYICRKCLTEFSTADERKEHLKTSSKCWGFACVHCKERFPSWERKQKHLVSKHNVQASTYPCSDCGILFKTRVRFYHHYHKTHSDLAHICSYCGNKFGNKGLLDDHLLMHTHEKQFNCTVCAKAFARKKGLRDHMWTHSEKKRFPCMICDRTFSQKISINSHMKTAHPELSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -