Basic Information

Gene Symbol
Kdm5
Assembly
GCA_958496245.1
Location
OY292419.1:449894-481430[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-24 6.4e-21 74.9 0.0 2 89 101 184 100 184 0.93
2 2 8 2.3e+04 -4.1 0.0 46 64 1302 1321 1290 1338 0.67

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACGAATGTGGAAGTTAATATGGGGGACTCCGCGTCCCCCATGAAGCCCGACAACTTCACCTTCACGCCGCCCCCGGAGGCCCCGGTCTTCGAGCCTACGGCGGAAGAGTTCCTGGACCCCTTGGCGTACATCAGCAAAATACGTCCCATCGCCGAGAAATCCGGGATCTGCAAGATAAAACCACCAGCGCATTGGCAGCCACCATTCGCTGTGGATGTGGACAGACTCCGGTTCACCCCGAGGATTCAGCGGCTCAATGAATTGGAGGCCATAACTCGAGTGAAGCTGAACTTCCTCGATCAGATCATCAAGTTTTGGGAGCTCCAGGGCTCCGTGCTGAAGATACCGACGGTGGAGCGGAAGCCGCTGGATCTCTATGCGCTGCATAAGATTGTCAAAGAAGCAGGTGGCTTCGAACTGTGCTCAGCTGAGCGGAAATGGTCGAAGATAGCGCGGCGCATGGGCCACCCCCAGGGTAAGGGCATCGGCTCCATCCTGAAGAACCACTATGAAAGGATCCTGTATCCTTACGACGTTTTCAAGAGCAATGGCGCTATTGGAGATAATAAAGAGACgAAGATAGAGGTGAAGCGGGAGAAGACGCCGGAGAAGGCGCGCTCCGTGTCGAAGTGCGGCGCCGCGAGCCCCCCTCCCGCgtcccccgcgccccccgcctccgccgccgcccccgccgccgccgccccctcCCCCGCGCGCCGCTACAAGGGCGAGCCGGAGCCCGCCGCAGAGGGCAGTCACACGGAGGGAGCGCTGCCGCCCAACAACGACAAGGGACTGAAGACACCCATCAAAGAGGAGACTCCTGAAACCAACCGACGCAGCCCCCGCGAGAACAAATGGATGTCAGGCACGGGCAGCTGCGGGTCGCGGGGACGCGTGACGCGGTCCACGAGGCTGCGGGAGCACCGCATGTCCAACATGACGGTGTCGGTGacccccgcgccgccgccgggGGGGCTGCCGGGGGGACTGCCGGGCCCCGTGGGAATACCCCTCACGCCCAACGACCCGCTGGCGAAGTACATGTGCCACGTGTGCGGGAGAGGCGACGTGGAGGAGCAGATGCTGCTCTGCGACGGCTGCGACGACTCCTACCACACCTTCTGCCTGCTGCCGCCGCTCGCAGACGTGCCCAAGGGGGACTGGCGGTGCCCCGTCTGTCTTGCTGAagagGTGTCAAAACCAGCCGAGGCGTTTGGTTTCGAGCAAGCCTCCCGGGAGTACACGCTGCAGCAGTTCGGAGAGATGGCAGATCAGTTCAAATCGGACTACTTCAACATGCCGGTTCATATGGTGCCAACATCGACCGTGGAGAAGGAGTTCTGGCGCATCGTGTCCTCCATAGACGAGGACGTTACTGTGGAGTATGGAGCTGACCTACACTCCATGGACCATGGATCCGGGTTCCCGACGAAGGCTCACGCGCAGCTGTACCCCGGCGAGCAGCAGTACGCGGACTCCAGCTGGAACCTGAACAACCTGCCCGTGCTGGAGGGATCCGTGCTCGGACACATCAACGCTGATATATCCGGCATGAAGATCCCGTGGCTGTACGTGGGCATGTGTTTCGCCACGTTCTGCTGGCACAACGAAGACCACTGGAGCTACTCCATTAACTACCTCCACTGGGGGGAGCCTAAAACTTGGTACGGAGTCCCGAGCTCGAAGGCTGAGCAATTCGAAGCCGCGATGAAGGCAGAAGCTCCGGAACTGTTCCAGCTGCAGCCAGATTTGTTGCACCAACTGGTCACCATCATGAATCCCAACGTGCTGATGAAGGCCGGCGTTCCCGTCTACAGaatGGATCAGCACGCGGGCGAGTTCGTGATAACGTTCCCCCGCGCGTACCACGCCGGCTTCAACCAGGGGTACAACTTCGCCGAGGCCGTCAATTTCACGCCGGCTGATTGGTTGAAGATGGGCCGCGAGTGCGTGCTCCACTACTCGACGCTGCGCCGCTACTGCGTGTTCTCTCACGACGAGCTCGTCTGCAAGATGGCGCTGGAGGCGGACGCGCTCAGCCTCACCGTCGCACTCGCAGCCTACCGCGACATGCGAGCCATGCTGCACACCGAGCGCAAGCTCAGGAAGAACCTGCTGCACTGGGGTGTGACGGAGGCGGAGCGCGAGGCCTTCGAACTGCTCCCGGACGACTCGCGGCAATGCGCCTCGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCCCGTGCACCACGCACGTGGCCTGCCTGCGCCACGCCGCGCAACTCTGCGCCTGCGCACCGCATCTGCACAGGCTCAGATATCGGTATACCCTCGACGAGCTACCGACGATGTTGGAGAAGCTGAAGAAGAAATCCGAGCAGTTCCGGGAGTGGGCGGAGGCCGTGCAGAACGCGCTGGATCCGGACACGCCTAAGACTTGCGACTTGGACGGACTGAGGGCGCACTTACACCGCGCCACCGAACTAAAGATGCAAAAGACCGAGTTAGTTCGCGCTCTCGAGACCGCCATCGAGGACGCGGAGAAATGCGCCTCCGTGATCCAGCAGCTGGACCTGAACAAGATGCGGACTCGAACTCGCCACCACGACCCCAAGTACCGCCTCTCCATCCACGAGCTGACGCTCTTCGCGGCTGAGATCGACAGCCTGGCCTGCGTTCTGCCAGAAGGTTCTGCAGTGAAGGAAGTACTTCGCCAGACTTCCGAGTTCGAGAGCCGATCGTCGGAACTGCTCAAGAAAGACTTGGAGAAGATCGACACCTCATACGTCAGGGAACTGGAAGAGACGGTGGAGTTGGGCGGTCGTCTGTGCATAGTGCTGCCGCAGCTGGAGGCGGTGTCGGCGCGACTCGCGCAGGCCAAGTGGCTGCAGGACTCGCAGCACCACCGCGAGAACAGCAACGCGCTCACGCCCACCGTACTCGCACAGCTGCTAGCCAGGGCTGACACTCTGCTGCCGCATGTCGCCATAGAGACGGAGAGGGCTATACTCTACAGATTGCAAgCTGAAGTGGCAGATTGGGAGCAGAAAGCGCAAGCAGTGCTCATAGACACCAGCAAGTCGACCCTGGACGAGGAGAATCCTCAGTACAGCACCATAGCGGAGCTGGTGCAGCTCCTCGCTGAGGGCTCCGAGATTGACGCGGCGCTGCCTTCCTACCACACCCTGCAGACGGCCATCACACACGCCAAGGATTGGCTCAACAAGGTGGAAGAGATGCAGTCGAAAGATCTGTACCCGTACATGCACAGCGTGGAGACGCTGGTGAAAAAGGCTCAGCAGCTGCCGCTGGCGCTGTACGAGAAGGACCAGCTGACGGCGGCGCTGCATTCTGCCGAGGAGTGGCGCCGCGGAGCCGCCGAGATGTTCCTCAAGAAGAACTGTGCGAGCACGCTGCTGGAGGCGCTGTCCCCGCGCACGGCGCCGGCGCTGGCGCAGCCGGGCGGGAGGCGCCGCGCCGACGCCGCGCTCTTCCTCGACAACTTCAACGAGGACTCCACGCCCACGGAGATCGTGCACGCATTCAAGCAGGCAGAGGCCCGGGAGCTGCAAGCTATCAAGGAGCTAAGGGCCCGCAACATGCGCAAGGACGTCCGCGCCCCGCCCGCGACCACCATCACATTCTGCATCTGTCAAAAGCGACAGTATGGCGTCATGACACAATGCGAACTTTGCAAGGATTGGTTCCATgCATCGTGTATCGCCAACGCGAGAGATGACCGTGAGGAATCTCCAGATCGTGAGGGGTTCCCCAGCTCGGAATCCAAATTCCTATGCCCTGACTGCGTGAGGACCAAACGACCTCGCCTGCATCGTATCCTGGCATTACTTGTGTGGCTGCAGAAGCTGCCTGTGCGGTTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACCAGGCCCGGGCCTTGCTGTCGCAGCCCTACCACTTACCCACTCATCAGGCGAGCAGGGAGAAAGCTGACAAACTGAATGCAGAATTGAAGAAGGCGACAGGGCGAGGTCACGACACCATGTCGCAGAACCCAAGATCGTCCGCGTCCGTGGAGCACGCGTACAGCGCCACGCCCAGGTCTCCGGGCTCCAGGATACCACCAGCGGCATTGCAGAAGCTGGAGGATCTGATGCTGGAAGGGGACTTACTCGAGgtGGTGCTGGAGGAGCAGCAGGCGGTGTGGGAGGCGGTgagcggggcgcggggcgcggcggggcggcgcggggctCGCGTGCTGGACGCGGGGCGCAGGAAGCGACGCCGCAAGGCGCCCACGCATCCGCCCAAACGCACGAGACACGCGCAAGCTGGAGCATCAGCGCCGACGGCGGTCACAGCACCGACCTCATCAACGAAGCCCTCAACGTCCAAGCGCGGAGGAGCCACCACCACCAACTATCTCAACAGGAAACAGGGCATGTCTTCAGCGTCCGGTCTGATGATGCGGAAGCACTACATGGCGCGGCAGGAGCGCCGCAAGCGAGGAGTCCCCACACGAGTCAGGGGCTGCCGGCGTggtggaggcggaggcggaggcggaggaggCAGCGCAGCGATGGCGCGCGCCACCGCGCCCGACAGCTCCTCCTCCTCCATGTCCTCCGCGGAGGACGAGGACGACTGCGCCGCCGTCAACTGTCTCAGACCCACCGGCAAAGAGGTGGACTGGGTGCAATGCGACGGCGGCTGCGACGAGTGGTTCCACATGCACTGCGTGGGCGTGGTGAAGGGCACGCTCGGGGAGAACGACGACTACGTGTGCGGCTCCTGCGCCAAGGACAACAAGCACTGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFELCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAIGDNKETKIEVKREKTPEKARSVSKCGAASPPPASPAPPASAAAPAAAAPSPARRYKGEPEPAAEGSHTEGALPPNNDKGLKTPIKEETPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPPGGLPGGLPGPVGIPLTPNDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRIVSSIDEDVTVEYGADLHSMDHGSGFPTKAHAQLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADALSLTVALAAYRDMRAMLHTERKLRKNLLHWGVTEAEREAFELLPDDSRQCASCKTTCFLSCVTCPCTTHVACLRHAAQLCACAPHLHRLRYRYTLDELPTMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLHRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFESRSSELLKKDLEKIDTSYVRELEETVELGGRLCIVLPQLEAVSARLAQAKWLQDSQHHRENSNALTPTVLAQLLARADTLLPHVAIETERAILYRLQAEVADWEQKAQAVLIDTSKSTLDEENPQYSTIAELVQLLAEGSEIDAALPSYHTLQTAITHAKDWLNKVEEMQSKDLYPYMHSVETLVKKAQQLPLALYEKDQLTAALHSAEEWRRGAAEMFLKKNCASTLLEALSPRTAPALAQPGGRRRADAALFLDNFNEDSTPTEIVHAFKQAEARELQAIKELRARNMRKDVRAPPATTITFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSSESKFLCPDCVRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARALLSQPYHLPTHQASREKADKLNAELKKATGRGHDTMSQNPRSSASVEHAYSATPRSPGSRIPPAALQKLEDLMLEGDLLEVVLEEQQAVWEAVSGARGAAGRRGARVLDAGRRKRRRKAPTHPPKRTRHAQAGASAPTAVTAPTSSTKPSTSKRGGATTTNYLNRKQGMSSASGLMMRKHYMARQERRKRGVPTRVRGCRRGGGGGGGGGGSAAMARATAPDSSSSSMSSAEDEDDCAAVNCLRPTGKEVDWVQCDGGCDEWFHMHCVGVVKGTLGENDDYVCGSCAKDNKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_01170351;
80% Identity
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