Basic Information

Insect: Perizoma affinitatum
Gene Symbol: -
Assembly: GCA_961405105.1
Location: OY560198.1:10901378-10912250[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.1 72 4.6 0.1 3 23 110 130 108 130 0.95

2 19 0.013 0.87 10.6 0.3 2 23 134 156 133 156 0.91

3 19 0.089 5.8 8.0 0.4 3 23 406 427 404 427 0.95

4 19 0.73 47 5.2 0.2 1 19 435 453 435 456 0.93

5 19 0.0067 0.43 11.6 1.1 2 23 466 487 465 487 0.94

6 19 5.5 3.6e+02 2.4 0.4 1 23 503 526 503 526 0.81

7 19 1.3 83 4.4 3.9 1 23 535 558 535 558 0.98

8 19 4.7 3e+02 2.6 3.3 5 23 606 626 601 626 0.84

9 19 0.35 23 6.2 1.5 1 20 634 653 634 657 0.82

10 19 0.087 5.6 8.1 0.3 1 23 662 685 662 685 0.93

11 19 9e-05 0.0059 17.5 2.7 1 23 691 713 691 713 0.97

12 19 5.1e-06 0.00033 21.4 1.9 1 23 720 742 720 742 0.98

13 19 4.2e-05 0.0027 18.5 1.4 1 23 747 769 747 769 0.96

14 19 0.0092 0.59 11.2 2.6 1 23 775 797 775 797 0.97

15 19 1.7e-06 0.00011 22.9 1.5 1 23 803 825 803 825 0.98

16 19 3.1e-05 0.002 18.9 3.1 2 23 832 855 832 855 0.96

17 19 0.0019 0.12 13.3 0.6 2 23 865 887 864 887 0.96

18 19 0.0027 0.17 12.8 0.4 1 23 892 914 892 914 0.97

19 19 0.0026 0.17 12.9 3.1 1 23 920 943 920 943 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.1	72	4.6	0.1	3	23	110	130	108	130	0.95
2	19	0.013	0.87	10.6	0.3	2	23	134	156	133	156	0.91
3	19	0.089	5.8	8.0	0.4	3	23	406	427	404	427	0.95
4	19	0.73	47	5.2	0.2	1	19	435	453	435	456	0.93
5	19	0.0067	0.43	11.6	1.1	2	23	466	487	465	487	0.94
6	19	5.5	3.6e+02	2.4	0.4	1	23	503	526	503	526	0.81
7	19	1.3	83	4.4	3.9	1	23	535	558	535	558	0.98
8	19	4.7	3e+02	2.6	3.3	5	23	606	626	601	626	0.84
9	19	0.35	23	6.2	1.5	1	20	634	653	634	657	0.82
10	19	0.087	5.6	8.1	0.3	1	23	662	685	662	685	0.93
11	19	9e-05	0.0059	17.5	2.7	1	23	691	713	691	713	0.97
12	19	5.1e-06	0.00033	21.4	1.9	1	23	720	742	720	742	0.98
13	19	4.2e-05	0.0027	18.5	1.4	1	23	747	769	747	769	0.96
14	19	0.0092	0.59	11.2	2.6	1	23	775	797	775	797	0.97
15	19	1.7e-06	0.00011	22.9	1.5	1	23	803	825	803	825	0.98
16	19	3.1e-05	0.002	18.9	3.1	2	23	832	855	832	855	0.96
17	19	0.0019	0.12	13.3	0.6	2	23	865	887	864	887	0.96
18	19	0.0027	0.17	12.8	0.4	1	23	892	914	892	914	0.97
19	19	0.0026	0.17	12.9	3.1	1	23	920	943	920	943	0.98

Sequence Information

Coding Sequence: ATGTCTTCGGACGATTCGGACGATGAGCCCCTTGCCGTATTGGCGTCGAAAAAACAATCTAATTACGAAATTGAAATCTTGCCTATTATTGAGAACAGGGGTCGCAAAAAGAAAACCTTCTCAGCTAAAAAGTCCTGTGATGTGACAATAGAACTACAATACAAAGATGACTTCTCACCTGTTATTGTGGAAAGACCCACAGATGTGTGGCTGTATCTGAAAGACTTCAACCCTAATGGCCCATACAGCTGTTTACTCTGCACTGAATGGTTTTTACATAAGACTAAAATAGTGATTCATTATGTGGTCAATCATAAAAAGGATTTCTGTGGTATATGCAGATATTTTGTGCCTGACAGAGAAGCATGGCAAGCCCACACAAAGTTCCACATACCTTGGCAATGCTCACAATGTCCCAACACATTCACCACTGAAGTGCTCTTGCGGGAACACTTCAGTCAAGTACACAAGCTTGTACACTGCAGACTTTGCTACACCCGTCTCATAGATGGTGAAGATTACCACAACCACTTGTTCCAAAAACACAGTGTTACTAACACCTCATGTAAAAACGAGGAGAGTTTTTGGGAGTTTGAGCAAGATGATTTAAAGTTCCTTTGCATATTGTGCTCCAAGTCCAACAATGACATTCAGACATTCTCAAACCATTACATGGCATACCACCACCTAACGTTGAAATGCTTGGCGCCTCTCATCTCTGGCAAAAACTGGAATTTCCCAGTCCAAGGTGCGGAAGTCAGCAATGAATTCTTTGATAGACAGCTCAAAAGCTATGACAAGTATGGGTATCTAGATTTAGATAAAAAGCCAGACAGGCTTATTGAAAAAGATGAAAATGTTGCATTCTCTAAAGAGATGACCCATGAGTTTGTAACTGAGATGGTAAAGGAAGAAGTTGTAAGCGAACCCGAGGAAAACATCACTGCCGATGACTATGACGATGGAACCGCTGATGATACTGAAAAAAACGATGAGCCGGAGCCAGACACATCTAACATTGATCGAAACGAACTCATGAAAACATACAAAGGGGATGATGACTTTGACACCACACATGTAGAAATGATCATGATGCAGAAATGTTACTTTGATTATGTCAATGAcacattgaataaaataaactgtaacACTATGCCTCAAGTTTCTGGGATCAGCTATGGAACAGCAGATGCTGACCACCTTGTCCTTATTGACTGTGAATTGTGTAAATCTCGATTCACCACACTAAACCCGTTTATCCAACACATGATAAAGATGCATGGTTTTAAAACGGTGTCAACATTTTCATGCAGAGTCTGTGCTACTACTTTTGACAGCTATCTTGAGCTGGAACAGCACGAGAGTCAGGAGTTGGGAGATTTTAATGATCTGTGGATCTGTCAATTCTGTGATAAGGAGTTTGATGATAGGAGCAAAACCAGAAAACACTTGACAGAGCATTGGGATGCCATAGAATATGACAATTGCTTCAGTCCCCATTTGGGGTTTAAGTGCAGATACTGCCCTACTTTGTTTTGGAATGAGACTGATCGGGAGATTCATCAAGTGCGAGTACATTTCCAGAAGCATTCAGATGATTTTTATAAGTGCGAGACCTGTGATGATCTTTGCAGTGATAAGGTTTGGTTCATACACCACTACCTTACAAAACATGCGACAGTAGAACAACCTACAGTTGGTTCGTACCTCCTTAAATGCTGCTTCTGTTGCATAGTCTTCCAGAATGTGGAAGAGGTCCGAAGCCACTTTAACGCTAAGCACCCTGATGCGCGGAGGGTATTCTGTTCCCTGGACACTTGTAAATACAAGCCGTTTAGTCATAAGAAATCATTTTTGTTGCATTTGAAGTCATTCCACAGTAAAAAGAAACCAGAAATCTTCCCTTGCCAATTTTGCGGCAAGGAATTCGGCAGTCAGAGGTCTTGTAGCGCGCACGCGACTCAGGCGCACGGGCCCGGCCGATTCGCGTGTAACATCTGCAAAGAGATGCTACGGACCGCCGACGAAAGAAAAATCCACTACTTACTCCGTCACCCGGGCCGCCATCCGTTCCAATGCCGTGATTGCGACAAGTCCTTCCAGTACAAGTCGTCTCTGTATTTACATCGGCAGGAACACGCGCCTGACAAGCAAGATTTTAAATGCACCTATTGTGGAAAAATATTCAAGAAGCGCGACTCGTTCCGGGAGCATGTGATGATCCACGAGGGGCCGAAACACGCCTGTTCGTATTGTCCCATGGTGTTCGTGCAGCGGTCCAACATGTTGCGACACGAGAGGAGGCACACCGGGGAGCGGCCGTACGCGTGCCAGTTCTGCCCTAAGACGTTCTCCGATAAGGGCGCATGCTCTTCACATTCTAGGACCCATCAAAAAATGCCAGCGTTTCCGTGCATGTATTGCGGGCAAACCTTCGCACAGAAGTCAAAACTGACTTACCATATTAGAAAACATACTGGAGAAAATCTAGAGACATGCCCGCATGCGAATTGCGGCAAGGTGTTCACAAGTCAGTGCTCGCTGCGCGATCACATGAAAATACATCAGAAGAAACAAGTTTTGGACCCTGTGAAATGCCCACTTTGTTCCAAATCATATCAAGACGAGAAGTATATGATGCGTCACTTACGCGCGACGCACACAAACGCTGAGTACTTCTGTCCTATTTGTCAGAAGAAACTACATAGCGCTGCTTCTTTGAGAGATCACGTACTCATTCATGGCGACTCTAAGGCTTTCAAGTGCAAACAATGCGCTAAATCCTACAACGTAAAACGCACAATGGTCAGACACCTCCGTCGCCGCCACGGCATCAAAAGTGCCAGCGCCAATTTGTCGGACTACTACAAGAAATTAGACCCCAGAGAATGCAATTTAAAACTTGACGATGCCACTATGGCCAGCATATTCGGACCCCCCAAACGAAAAATCGCTGATGTCGTCAATTTTACGAGCATGAACAAGAGATTGAAACTCGACCGATTGACAGAAAGATACGATGAGAACACTCAAAGTGATAATGAAAGTGATGTATTCCAAACACAGATACAAGTGAAGATTGAGTGTGAAGAAACGGGCGAAATGGAGAATGTTGAAGAGTTACAGCCGACTGATTTCGTTAGCGTTAAGATTGAATGTGCAGAGGAAGTTGATAAGTTTGGGGAAGAGAATGAAGAGTATGAGGAAGACATTGAATGA
Protein Sequence: MSSDDSDDEPLAVLASKKQSNYEIEILPIIENRGRKKKTFSAKKSCDVTIELQYKDDFSPVIVERPTDVWLYLKDFNPNGPYSCLLCTEWFLHKTKIVIHYVVNHKKDFCGICRYFVPDREAWQAHTKFHIPWQCSQCPNTFTTEVLLREHFSQVHKLVHCRLCYTRLIDGEDYHNHLFQKHSVTNTSCKNEESFWEFEQDDLKFLCILCSKSNNDIQTFSNHYMAYHHLTLKCLAPLISGKNWNFPVQGAEVSNEFFDRQLKSYDKYGYLDLDKKPDRLIEKDENVAFSKEMTHEFVTEMVKEEVVSEPEENITADDYDDGTADDTEKNDEPEPDTSNIDRNELMKTYKGDDDFDTTHVEMIMMQKCYFDYVNDTLNKINCNTMPQVSGISYGTADADHLVLIDCELCKSRFTTLNPFIQHMIKMHGFKTVSTFSCRVCATTFDSYLELEQHESQELGDFNDLWICQFCDKEFDDRSKTRKHLTEHWDAIEYDNCFSPHLGFKCRYCPTLFWNETDREIHQVRVHFQKHSDDFYKCETCDDLCSDKVWFIHHYLTKHATVEQPTVGSYLLKCCFCCIVFQNVEEVRSHFNAKHPDARRVFCSLDTCKYKPFSHKKSFLLHLKSFHSKKKPEIFPCQFCGKEFGSQRSCSAHATQAHGPGRFACNICKEMLRTADERKIHYLLRHPGRHPFQCRDCDKSFQYKSSLYLHRQEHAPDKQDFKCTYCGKIFKKRDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQFCPKTFSDKGACSSHSRTHQKMPAFPCMYCGQTFAQKSKLTYHIRKHTGENLETCPHANCGKVFTSQCSLRDHMKIHQKKQVLDPVKCPLCSKSYQDEKYMMRHLRATHTNAEYFCPICQKKLHSAASLRDHVLIHGDSKAFKCKQCAKSYNVKRTMVRHLRRRHGIKSASANLSDYYKKLDPRECNLKLDDATMASIFGPPKRKIADVVNFTSMNKRLKLDRLTERYDENTQSDNESDVFQTQIQVKIECEETGEMENVEELQPTDFVSVKIECAEEVDKFGEENEEYEEDIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01171709;
90% Identity: iTF_01171709;
80% Identity: -