Paff002684.1
Basic Information
- Insect
- Perizoma affinitatum
- Gene Symbol
- kn
- Assembly
- GCA_961405105.1
- Location
- OY560186.1:8533839-8555967[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-73 1.4e-69 235.4 0.0 11 158 172 310 163 311 0.95
Sequence Information
- Coding Sequence
- ATGGTGTATAAGTGGCGCCACCTTTGCGAGTGTTGCTGTCCCGCTCGTGAGGCGAGGGCGTGTCCCCAGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGGTTCTTACCCGGGCACTGCGCGCGATCCCGCGACGCTTGTTAGTGCTCTCCGAATCCGCAGCGGGATCGCCCGCTGAGCCGGGACACGATCCCAGTACGCACACGATAACGCAGAGCCGTCTATCGGACACCTCGACAACCAACAATTTGCGAACTTCGAATTCGAAAGAATCGAGATTCATTTCTGACTGTTGGCTCGCATCGTGTGTCGCGATTCGGTCGGACGAGCTAAACGCGGCGGCGGGCGGGTATACTGGCTCGCCGTGGCCGCCGCTGGAGTTAGACCCCGTGGGATGGGGGCGAAAGCTGTATCCTTCGGGAGCGCCGAGAACTTCAGgcGGACTAATGTTCGGCCTCCACCACCAGGAGGCGGCTGGCGGGTTGCACGCTCAGCCGCGAGGTCCCGTGACGTCACTCAAGGAGGAGCCCCTCACCAGAGCGTGGATGACGCCAAGCTCACTAGTTGACAACACCAACGTCGGGGTAGGCGTCGGGAGAGCCCACTTCGAGAAGCAACCGCCTAGCAACCTGCGCAAGAGCAACTTTTTCCACTTTGTCGTAGCACTGTACGACCGCTCCGGACAACCTGTTGAGATTGAAAGGACAGCCTTTATCGGCTTCATTGAGAAGGATCAGgaaGCAGAGGGGCAAAAGACGAACAACGGAATCCAATACAGACTTCAGTTATTATACGCGAATGGTATCAGACAAGAACAGGACATTTTTGTACGGCTCATAGATTCAGTCACAAAacagcCCATCGTTTATGAAGGTCAAGACAAAAATCCAGAGATGTGCAGAGTTTTACTTACGCATGAAGTTATGTGCAGGTGA
- Protein Sequence
- MVYKWRHLCECCCPAREARACPQGASHSPRGRTGVLTRALRAIPRRLLVLSESAAGSPAEPGHDPSTHTITQSRLSDTSTTNNLRTSNSKESRFISDCWLASCVAIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRTSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNVGVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRSGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00321385;
- 90% Identity
- iTF_01171252;
- 80% Identity
- -