Basic Information

Insect: Perdita meconis
Gene Symbol: stc
Assembly: GCA_030770465.2
Location: JASKOS020000012.1:3892148-3898995[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 4.1e+04 -4.4 1.6 15 19 549 553 548 553 0.81

2 16 0.069 1.4e+03 0.6 0.2 4 10 582 588 581 589 0.95

3 16 4.6e-06 0.095 13.9 12.7 4 19 599 614 597 614 0.93

4 16 2.5e-06 0.051 14.8 12.6 3 18 652 667 644 668 0.84

5 16 0.26 5.4e+03 -1.3 1.7 7 13 672 678 672 679 0.84

6 16 1.5 3.1e+04 -3.7 0.6 6 10 696 700 695 700 0.88

7 16 5.5e-08 0.0011 20.1 11.3 1 18 706 723 706 724 0.98

8 16 1.4e-06 0.028 15.6 12.4 4 18 771 785 764 786 0.86

9 16 2 4.1e+04 -4.7 1.6 5 10 815 820 815 820 0.90

10 16 0.00058 12 7.2 8.4 1 11 826 836 826 837 0.97

11 16 1.5 3e+04 -3.7 0.6 4 10 841 847 840 847 0.86

12 16 5.1e-10 1e-05 26.5 12.0 1 19 853 871 853 871 0.98

13 16 1.4 3e+04 -3.7 0.5 6 10 900 904 899 905 0.70

14 16 2 4.1e+04 -7.5 4.2 10 12 918 920 916 927 0.55

15 16 4.2e-07 0.0085 17.2 13.5 1 16 964 979 964 990 0.85

16 16 8e-06 0.16 13.1 13.6 1 19 996 1015 996 1015 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	4.1e+04	-4.4	1.6	15	19	549	553	548	553	0.81
2	16	0.069	1.4e+03	0.6	0.2	4	10	582	588	581	589	0.95
3	16	4.6e-06	0.095	13.9	12.7	4	19	599	614	597	614	0.93
4	16	2.5e-06	0.051	14.8	12.6	3	18	652	667	644	668	0.84
5	16	0.26	5.4e+03	-1.3	1.7	7	13	672	678	672	679	0.84
6	16	1.5	3.1e+04	-3.7	0.6	6	10	696	700	695	700	0.88
7	16	5.5e-08	0.0011	20.1	11.3	1	18	706	723	706	724	0.98
8	16	1.4e-06	0.028	15.6	12.4	4	18	771	785	764	786	0.86
9	16	2	4.1e+04	-4.7	1.6	5	10	815	820	815	820	0.90
10	16	0.00058	12	7.2	8.4	1	11	826	836	826	837	0.97
11	16	1.5	3e+04	-3.7	0.6	4	10	841	847	840	847	0.86
12	16	5.1e-10	1e-05	26.5	12.0	1	19	853	871	853	871	0.98
13	16	1.4	3e+04	-3.7	0.5	6	10	900	904	899	905	0.70
14	16	2	4.1e+04	-7.5	4.2	10	12	918	920	916	927	0.55
15	16	4.2e-07	0.0085	17.2	13.5	1	16	964	979	964	990	0.85
16	16	8e-06	0.16	13.1	13.6	1	19	996	1015	996	1015	0.97

Sequence Information

Coding Sequence: atGGCTACTTGGGATGGATCTTATACTGGGTCTGATGATCAAAATTACTACGTATACTCCGATCAAAACGTTCCTGCTCCCGCGACAGGAAACTGGACGTACTTTCCGAACGCTGTGAATAACGATTATCTGCAACCGAATCGTGAATTTTTTGGACGAAACGAACCTGTGTACGAACAAAATTGTCCGAATGCATTCTATCAATCGAATATAAACGCTATACCGAGTCTGTTGCCTAATGCCAATAATTATCAAGAACACTTGAGCAATACTGCAAGAAACACCCAAATGTCGAGTAATTTAGAATACTTTTCTGCTAATAACTCTCAACAGTGTTACGTACCCGTCGATTATTGGAGGAACAATGTGAAAACAGTGAAGAGTAAATCCGATTTCGCGAGGAAAGCGGAAAAAAGCACCAGACCGTCCAATTTGCATGCAATGGCTGAAGAATTTGTGCCGAACAATAGCAGGTCTGACGACGGGAAACAGGAATCCGAAAATGGAAACGTTCCGTCGTTCGTTGACGGTACGGATTCTTGTAAGGACGCGAAGTCTGTTCCTAGAGCGTCGGATAAATATTCGTCGTACGATGCGAGTAAATACGAAAGAAGGTACGATAACAAAAGAAGTACGAATTACAAATCTAAAGAGGCGTACCAAGATTATTCTTATAAGAGAAATTCGTACAGAAATTCTTATCAACAACAGGGCAGGTTTGCTcagaaatttcaaggaaataaatattatactaataaatattattcagacAAATCGCAAGCACCTGCGAAAGATGCGAATGTATTAGGCAACAATTCAACGAGCAATGATAACGTCTATACCAACGACAAAACTACGACAAATTCATACGTAGAGGAATCTTCGTCCGGTGTGGATATAAATTTGAGTAAAAATAGAAACGCAGTGATTGATAATAGCGATAAAGGAAGTATCAACGTTAAGGAAGACGTGCAAGCTAATGGAACGAAGCCTTTCAATAATCACGTCAAAGACTTTGCTTATTATAATTCTAGTTATAGAAATAAGAAGTATCCTTACAACGGCAGACAAAATAGAGAGGAGAACGGTTACAGAGAGAGGAGACGTAATTATCAGGGGTACGAGACCTGGGATACTCATAGCAAGGAGGATAAATTTGACGTAAGAGAGCAAACGTCTCATCAAGAGGAACGCAATGAATTTCCGAATAGTTTTAACGAAGAAGGTGAAACTGGAACGAAGGAGACGAAAGAGAAGAGGTATAATTATCAATTGCATAATGGCTTCAGGGAACAGAGCAAGGGAGATAAAACTGAAGGTTTCAGAGAAAAAGATAGGAGTAAGAACTATGCGTATGAGAATAAAGAAAAGAGCAACGAAAATTGGAGAAGCAAAAGAGATATGAATGAAAAGCAAAATAATCAGAAACGAAGacagaataaaaaatctttgattgACGACGACGCGAGTCAAAGGGAGAGATTGACGGATCAATTAAATAGAGGACAACTAGAATGTTTAGTATGTTGCGAATACATAAAACGGAACGATTATGTTTGGTCGTGTTGTAATTGTTATCATGTTTTGCActtgaaatgtattaaaaaatgggCAAAATCGTCGCAAATAGaaaacggCTGGAGATGTCCTGCGTGTCAAAATGTGAGCTTAGAAATTCCCAAAgagtatttttgtttctgcGGTAAAGCAAGAACACCTGAATGGAATCACGGAGACGTTGCACACTCTTGCGGGGAAGTTTGTGGCAGGAATCTATCGAAAGATAATTGTCTTCATAAATGCACTCTTCTTTGTCATCCAGGTTCTTGTCCGCAATGTACTGCGATGGTGACGAAATACTGCGGTTGTGGAAAAACGTCGCAAATAGTACAATGCAGCACGCGTAAACTCTTGCTATGCGATTCTGTCTGTGGTAAAGATTTGAACTGTCTTAGACATAAATGTGAAAGAACGTGTCACAATGGAGAATGTACGaattgtgaaaaaatgatagaacAAGTATGTCACTGcggtaaaaataaaagggAAGTAACGTGTCAAAGTGACGTTTTGTTCACATATTCGTGCGAAAATATTTGTGGCAAGTTATTAGATTGCGGTAATCACACTTGCACAAAGTTATGCCACGCGGAGGAATGCGAACCTTGCGCACTGACTCCCGAGAAAATTACAACCTGTTGCTGCGGACAAACACCGCTAACAAACGAAAGAAAATCTTGCCTAGATCCGATTTCAGTCTGCGACAAAATATGctcgaaaaatctgaaatgcGGTCAACCTAATAATCCTCACAAATGCAAGGTAAAATGCCACGAGGGAGATTGTCCTGTTTGCGATTTGACCACCGACGTTAAATGTCGTTGTGGAAACATGGACAGAGAAATAGCTTGCAAAGACTTAACGTCGAAAGCCGACGACGCCAGATGCGAGAAACGATGTACGAAGAGAAGATCGTGCGGCAAACACAAATGTAATCAACTATGTTGCATAGAAGTAGAACACATCTGCCCGTTAGTGTGTTCGAAAACTTTAAGCTGCGGTAGACATAAATGCGAGCTTAGCTGTCACAAAGGAAGGTGTCAACCCTGTTGGCGGAGCAGCTTCGACGAATTGTATTGCGAATGCGGAGCTGCTGTCATATATCCTCCGGTTCTCTGCGGAACGAGGAGACCTGCCTGCGACAGACCTTGCTCTCGTCAGCATTCGTGCGATCACGAAGTATTGCATAATTGTCACAGCGAACCCGTGTGTCCTCTTTGCACTGTTCTCACGAAAAGATGGTGTCACGGAAAACACGAGCTGCGAAAAGCTGTGCCGTGTTACGTTAGCGAGATTTCGTGCGGTTTGCCGTGCAGCAAGCCTGTGTCGTGCGGCCGGCACAAATGCACGACGATTTGTCACTCTGGACCGTGCGAGAAACCAGGACAACAATGCACTCAACCTTGCACTACTCCGAGAGAGATGTGCGGGCATATTTGTGCTGCCCCGTGTCACGAGGGCAAATGCCCAGATACACCGTGCAAGGAGACGGTGAAGGTAACGTGCCAGTGCGGACACAGGACAATGTCTCGTGTTTGCGCGGAAAACGCTAAGGAATATCAGAGGATAGCGAGCAGTATATTAGCTAGCAAAATGGCCGATATGCAATTGGGTCATTCGGTTAATTTGGAGGAAGTTTTCGGCCAAGGGGCAAAGAAACAGAATCAATTGAAAACTTTGGAATGTAACGATGAATGTAAACTAATAGAGCGCAATAGGAAATTAGCGTTAGGGTTACAAATTGTGAATCCAGATTTAAGCGGGAAACTGATGCCTAGATATAGCGATTTCATGAAGCAGTGGGCGAAGAAAGACCCGCATTTTTGTCAGATGGTTCACGATAAACTGACAGAGTTGGTTCAGTTAGCGAAAACTTCGAAACAGAAATCGCGTAGCTATTCTTTCGAAAGCATGAACAAAGATAAGCGTCATTTCATTCATGAATCTTGCGAGCATTTCGGATGTGAAAGTCAAGCATACGATCCGGAGCCTAAGAGGAACGTTGTTGCCACTGCCGTGAAAGATAAGTGTTGGTTACCTAGTTATAGCCTATTAGAAATCGTACAGAGGAACAATGGTCAAAGAAAAGTCCCGGGTCCCATGCTGGGCACTTCAAAGGCTGATGGATCAGTAAAgacGATATTATCACTGCCTGCAAAAAAGAACCAAAAGCCAGAAACACAGTCAAGCACAAAGGTGCCAGAACCAGAAATAGATTATTTTGATTATCAAGGTTAA
Protein Sequence: MATWDGSYTGSDDQNYYVYSDQNVPAPATGNWTYFPNAVNNDYLQPNREFFGRNEPVYEQNCPNAFYQSNINAIPSLLPNANNYQEHLSNTARNTQMSSNLEYFSANNSQQCYVPVDYWRNNVKTVKSKSDFARKAEKSTRPSNLHAMAEEFVPNNSRSDDGKQESENGNVPSFVDGTDSCKDAKSVPRASDKYSSYDASKYERRYDNKRSTNYKSKEAYQDYSYKRNSYRNSYQQQGRFAQKFQGNKYYTNKYYSDKSQAPAKDANVLGNNSTSNDNVYTNDKTTTNSYVEESSSGVDINLSKNRNAVIDNSDKGSINVKEDVQANGTKPFNNHVKDFAYYNSSYRNKKYPYNGRQNREENGYRERRRNYQGYETWDTHSKEDKFDVREQTSHQEERNEFPNSFNEEGETGTKETKEKRYNYQLHNGFREQSKGDKTEGFREKDRSKNYAYENKEKSNENWRSKRDMNEKQNNQKRRQNKKSLIDDDASQRERLTDQLNRGQLECLVCCEYIKRNDYVWSCCNCYHVLHLKCIKKWAKSSQIENGWRCPACQNVSLEIPKEYFCFCGKARTPEWNHGDVAHSCGEVCGRNLSKDNCLHKCTLLCHPGSCPQCTAMVTKYCGCGKTSQIVQCSTRKLLLCDSVCGKDLNCLRHKCERTCHNGECTNCEKMIEQVCHCGKNKREVTCQSDVLFTYSCENICGKLLDCGNHTCTKLCHAEECEPCALTPEKITTCCCGQTPLTNERKSCLDPISVCDKICSKNLKCGQPNNPHKCKVKCHEGDCPVCDLTTDVKCRCGNMDREIACKDLTSKADDARCEKRCTKRRSCGKHKCNQLCCIEVEHICPLVCSKTLSCGRHKCELSCHKGRCQPCWRSSFDELYCECGAAVIYPPVLCGTRRPACDRPCSRQHSCDHEVLHNCHSEPVCPLCTVLTKRWCHGKHELRKAVPCYVSEISCGLPCSKPVSCGRHKCTTICHSGPCEKPGQQCTQPCTTPREMCGHICAAPCHEGKCPDTPCKETVKVTCQCGHRTMSRVCAENAKEYQRIASSILASKMADMQLGHSVNLEEVFGQGAKKQNQLKTLECNDECKLIERNRKLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFESMNKDKRHFIHESCEHFGCESQAYDPEPKRNVVATAVKDKCWLPSYSLLEIVQRNNGQRKVPGPMLGTSKADGSVKTILSLPAKKNQKPETQSSTKVPEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -