Pmec021607.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- gata4
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000009.1:6555684-6561761[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4 2.6e+04 -3.9 0.1 20 24 67 70 64 70 0.75 2 3 3.4e-18 2e-14 54.0 3.2 1 34 99 131 99 133 0.97 3 3 2.5e-19 1.5e-15 57.6 4.2 1 35 153 186 153 187 0.98
Sequence Information
- Coding Sequence
- ATGTCGTCGAGGAAACGCAAAACGAAATCCGAGCGCGTTCTTTTTCTCTCCGTCGGTTTCTCGCGTCTCTGGATGGACAACGGGATCGTCAACAAGACCGTCGGCGACGTCAGCGACGTCAGCGACTCGTCTCTTACCTATATACATACGATATCCAATTGCTTCCCAGTCGAGTTTCTGCCGGATGGGCAACTGCCAAAGCTCTGCAATTGGGTTAGAACAGAGCTATTTGAAAATGGTACGAAACGCACAGTGCACAACATCGAGGCGGAATACTTTACGGAGGGCCGTGAGTGCGTGAATTGCGGGGCAATTTCCACGCCGCTGTGGCGACGGGACGGAACGGGGCATTACCTGTGCAACGCATGCGGCCTCTACCACAAGATGAACGGGATGAATCGGCCCTTGGTGAAGCAGCCGCGCCGACTGTCCGCCTCGAGGCGATCGGGCACCTCTTGCAGCAACTGTGGAACGGTGAACACGTCGCTGTGGCGTCGGAACACTAACGGCGAGCCGGTCTGCAACGCCTGTGGCCTCTACTTCAAACTCCACGGCGTCAACAGGCCTCACAGCATGAAAAAGGACAGCATTCAGACGCGAAAGAGGAAACCGAAGGGCGCCGTCAAGCCTAACCACGAGGCCCTGACCTGCGCGGCTACCATCAAAATCAACAACACCAATACCACCACCGCCACCACTActaacaacaacaacaacaataacAGCACcaacaataacaacaataacAACTGCTTAAAAATGGAACCAGGAACCGACAACGATCCAAGGATGAACCACGCCGGAGTACCTCAAACGACTTACGGCAACGCCCTTTACGATAGTCCTCCGCATATTCCTCGGGCATACTTGTACATGCCTTTCGTGTCTCAAATGTatcagcaacagcagcagcaacaacagcagcaacaacagcaacagcagcacCAACACCAGCAGCAACACCATCAACACCAGCAGCTGATGGAGACCCACTCGCCGAAGATCGAGTGTCCGTCGCCGTCTTGCGCGAACCGGTCACCCGATCATCATCAGATGACCACCCCGCACATCGTCACCATCGGCGACAACTCCTCGCCCAGCGCGGCCGCCTCTAAGCTGATCCTCGACCCTAATCATCTGGACAGACCAACGGTTGTGTCCATATCCTCTTAA
- Protein Sequence
- MSSRKRKTKSERVLFLSVGFSRLWMDNGIVNKTVGDVSDVSDSSLTYIHTISNCFPVEFLPDGQLPKLCNWVRTELFENGTKRTVHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRSGTSCSNCGTVNTSLWRRNTNGEPVCNACGLYFKLHGVNRPHSMKKDSIQTRKRKPKGAVKPNHEALTCAATIKINNTNTTTATTTNNNNNNNSTNNNNNNNCLKMEPGTDNDPRMNHAGVPQTTYGNALYDSPPHIPRAYLYMPFVSQMYQQQQQQQQQQQQQQQHQHQQQHHQHQQLMETHSPKIECPSPSCANRSPDHHQMTTPHIVTIGDNSSPSAAASKLILDPNHLDRPTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -