Basic Information

Insect: Perdita meconis
Gene Symbol: iec1_1
Assembly: GCA_030770465.2
Location: JASKOS020000010.1:11287997-11289936[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5e-06 0.00026 22.4 1.2 1 23 55 77 55 77 0.99

2 16 6.7e-06 0.0012 20.3 0.3 1 23 83 108 83 108 0.95

3 16 4.4e-05 0.0077 17.8 0.7 1 23 114 136 114 136 0.98

4 16 2.7e-05 0.0047 18.4 3.5 1 23 142 164 142 164 0.95

5 16 0.00033 0.057 15.0 2.4 1 23 170 192 170 192 0.94

6 16 1.4e-05 0.0024 19.3 2.2 1 23 198 220 198 220 0.98

7 16 0.0045 0.77 11.5 0.1 2 23 253 275 252 275 0.96

8 16 0.00032 0.056 15.0 2.0 1 23 280 302 280 303 0.95

9 16 1.5e-05 0.0027 19.2 3.7 1 23 347 369 347 369 0.98

10 16 3e-05 0.0052 18.3 1.3 1 23 397 419 397 419 0.99

11 16 6.4e-05 0.011 17.3 0.3 2 23 426 448 425 448 0.94

12 16 0.00022 0.038 15.6 0.0 1 23 454 476 454 476 0.97

13 16 0.00055 0.095 14.3 1.2 1 23 482 504 482 504 0.97

14 16 0.37 64 5.4 8.5 1 23 510 532 510 532 0.78

15 16 2e-05 0.0034 18.9 0.1 1 23 538 560 538 560 0.97

16 16 0.0023 0.39 12.4 2.4 5 23 569 588 567 588 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5e-06	0.00026	22.4	1.2	1	23	55	77	55	77	0.99
2	16	6.7e-06	0.0012	20.3	0.3	1	23	83	108	83	108	0.95
3	16	4.4e-05	0.0077	17.8	0.7	1	23	114	136	114	136	0.98
4	16	2.7e-05	0.0047	18.4	3.5	1	23	142	164	142	164	0.95
5	16	0.00033	0.057	15.0	2.4	1	23	170	192	170	192	0.94
6	16	1.4e-05	0.0024	19.3	2.2	1	23	198	220	198	220	0.98
7	16	0.0045	0.77	11.5	0.1	2	23	253	275	252	275	0.96
8	16	0.00032	0.056	15.0	2.0	1	23	280	302	280	303	0.95
9	16	1.5e-05	0.0027	19.2	3.7	1	23	347	369	347	369	0.98
10	16	3e-05	0.0052	18.3	1.3	1	23	397	419	397	419	0.99
11	16	6.4e-05	0.011	17.3	0.3	2	23	426	448	425	448	0.94
12	16	0.00022	0.038	15.6	0.0	1	23	454	476	454	476	0.97
13	16	0.00055	0.095	14.3	1.2	1	23	482	504	482	504	0.97
14	16	0.37	64	5.4	8.5	1	23	510	532	510	532	0.78
15	16	2e-05	0.0034	18.9	0.1	1	23	538	560	538	560	0.97
16	16	0.0023	0.39	12.4	2.4	5	23	569	588	567	588	0.94

Sequence Information

Coding Sequence: ATGCGAGTTAATGCCGATCGAGATGGAAAGATCGAATCCAAGAAAAATCTTGATGCGCCCGTCGCAAAATGTACAAAGCGTGTTGCGTTGTCGTCGAAACGATCGTTGCAGCAACGCGACGAAGTGGCTCGTTCGAAAATCACCGACAATGGATCGACGCGCTACAAGTGTAACGACTGTGGGAAAATACTGTCCACTTCCTACAACTTTTTGATCCATCGTAACACTCATACTGGAGAGAGACCGTACATTTGTCACGTCTACGTCTGTGGGAAAACCTTCGGTTCCGCATCCGGGTTAAATAGACACGTACGCGATGTTCACGCgggagtaaaaaaattttcctgCGACATATGCGATCGTTCTTTCGCTTCGAAAGCCTCGCGAGACGAACATAGGCGTACTCATACAGGAGAAAGGCCGCACGCGTGCGAGACTTGCGGTAAATCGTTTAAACAGAAGGCATCTCTGCACGTTCACAGATTCGTCCATTCGAACAAATTTCCCCACGAATGTCCCCTGTGCGAGCAAACTTTCCGGCGAAAGCAGGACCTAGACAAGCACTTTTTCATTCACACCGAGCAGAAACCTTACCCTTGCGACGTTTGCGGCAAACGATTTCGCAGCAAAGGCTGCATCAGTCGTCACAAACGCGTCCATAACGATGATCGAGGgTCAAAAAATCTCTCGGACGGCGTTGCGCGTATACTGAaggtgaaaaacgaaaaaacaaACGGCGAGGAGATCGAGTACGTCCAATGTGTTCGATGTGACACCATCTTCGTGAGCATGCAGTATTTTATAAACCATATGAACGTGGAACACGATGCTCGAATGTATTATTGTCAGTATTGTAAGTTAGTGTATGGTCGCCAGAAGGAATTCGAGAACCACATGATCGCTCATCACGACGACGGGAAGGTGCTGGATAATGTTGCGGAAGGTGAAACGTTGAAACGGGCAAAAGGGAGAAGCGCGAACAAAGAGGATCTGCTAAAGGAGGCGGCGCCAATTGTAAAAACAGAACCGCTCGCGTATTTCACGTGTCATTTgtgcgaaaaaaattttgttacgaaATTGGACCTGAAGCAGCACATAAAGAGACACACGGATAGAAGTTCAGCGAAAGATCTAGACGAAACCGAACTGGTAAATAAAGCAAGACAGGTGATCGATAATCGTGTGTCTTACAAATGCAACACTTGCAAGAAGGTGCTAGTTACGAGACGAGGATTTTTGCGTCATATTCGCGTTCACTTTGACACGCGACCGTGCGTGTGCGACGTATGCGGGAAATCGTATCGAATCGAACAAGATCTGGCCAGGCACATAAGGGATGTTCACGAGGGATTGAAGAAATATGCTTGCGACATCTGTGGTCGTGCGTTCGCGAACAAGGGCGCGAAAGACGACCATCGAAGAATCCATACGGGAGAACGGCCGTACGCATGCGATCACTGCCCTAAGATGTTCCGTACGTTAAATTCGATTTATATTCACAATCGCGTGCACACGGACTACAAGCCGCACAAATGTTCGTACTGTGAAAAATACTTTAGGAGCAGACAGAGGCGAAACCATCACGAGACCACGCATACACGAATCAAAACTTTCGCCTGCGAAATCTGCGGCAAAACTTTCTCTATCAAGGGAGAAGTTGTACGACATCGAGCGACGCATAACGAGGAAAAACCGTTCGATTGTAAATGTGGCATGAAGTTCAGACAAAAGAGATATTTAAGGAGTCATATTAAACAGCGTCATAAGGAGGCTTCTTCGTTATTGTTGGAAGAGTTATCAGGAAATAACAACTAA
Protein Sequence: MRVNADRDGKIESKKNLDAPVAKCTKRVALSSKRSLQQRDEVARSKITDNGSTRYKCNDCGKILSTSYNFLIHRNTHTGERPYICHVYVCGKTFGSASGLNRHVRDVHAGVKKFSCDICDRSFASKASRDEHRRTHTGERPHACETCGKSFKQKASLHVHRFVHSNKFPHECPLCEQTFRRKQDLDKHFFIHTEQKPYPCDVCGKRFRSKGCISRHKRVHNDDRGSKNLSDGVARILKVKNEKTNGEEIEYVQCVRCDTIFVSMQYFINHMNVEHDARMYYCQYCKLVYGRQKEFENHMIAHHDDGKVLDNVAEGETLKRAKGRSANKEDLLKEAAPIVKTEPLAYFTCHLCEKNFVTKLDLKQHIKRHTDRSSAKDLDETELVNKARQVIDNRVSYKCNTCKKVLVTRRGFLRHIRVHFDTRPCVCDVCGKSYRIEQDLARHIRDVHEGLKKYACDICGRAFANKGAKDDHRRIHTGERPYACDHCPKMFRTLNSIYIHNRVHTDYKPHKCSYCEKYFRSRQRRNHHETTHTRIKTFACEICGKTFSIKGEVVRHRATHNEEKPFDCKCGMKFRQKRYLRSHIKQRHKEASSLLLEELSGNNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -