Basic Information

Insect: Perdita meconis
Gene Symbol: ZNF236
Assembly: GCA_030770465.2
Location: JASKOS020000001.1:12038159-12054342[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 6.3e-05 0.011 17.3 1.9 2 23 170 191 169 191 0.96

2 25 0.00011 0.02 16.5 1.1 1 23 197 219 197 219 0.98

3 25 8.1e-06 0.0014 20.1 0.3 2 23 225 246 225 246 0.97

4 25 0.0082 1.4 10.6 0.2 3 23 254 274 252 274 0.96

5 25 7.4e-05 0.013 17.1 0.9 2 23 285 306 285 306 0.98

6 25 8.2e-07 0.00014 23.2 1.1 1 23 327 349 327 349 0.99

7 25 6.1e-05 0.011 17.3 1.0 1 20 355 374 355 377 0.95

8 25 2.2e-05 0.0038 18.7 0.5 1 23 383 406 383 406 0.95

9 25 0.0029 0.5 12.1 2.2 3 23 417 438 415 438 0.97

10 25 4.1e-07 7.2e-05 24.2 1.9 1 23 566 588 566 588 0.98

11 25 0.00086 0.15 13.7 2.4 1 23 594 616 594 616 0.99

12 25 0.14 24 6.8 1.6 1 23 622 644 622 644 0.96

13 25 0.0054 0.93 11.2 6.7 1 23 737 759 737 759 0.98

14 25 3.7e-05 0.0064 18.0 5.1 1 23 765 787 765 787 0.99

15 25 9.4e-06 0.0016 19.9 1.2 1 23 793 815 793 815 0.98

16 25 0.00044 0.077 14.6 7.6 1 23 821 843 821 843 0.98

17 25 0.00047 0.081 14.5 2.7 1 23 1251 1273 1251 1273 0.98

18 25 0.0019 0.32 12.7 2.4 2 23 1280 1301 1279 1301 0.96

19 25 1.1e-07 2e-05 25.9 1.4 2 23 1380 1401 1379 1401 0.98

20 25 0.0008 0.14 13.8 3.5 1 23 1407 1429 1407 1429 0.99

21 25 0.00027 0.047 15.3 1.9 1 23 1435 1457 1435 1457 0.98

22 25 0.0015 0.26 13.0 3.8 1 23 1463 1485 1463 1485 0.98

23 25 5.8e-06 0.001 20.5 0.5 2 23 1701 1722 1700 1722 0.97

24 25 3.3e-05 0.0057 18.2 3.3 1 23 1728 1750 1728 1750 0.98

25 25 1.4e-07 2.4e-05 25.6 2.0 1 23 1756 1779 1756 1779 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	6.3e-05	0.011	17.3	1.9	2	23	170	191	169	191	0.96
2	25	0.00011	0.02	16.5	1.1	1	23	197	219	197	219	0.98
3	25	8.1e-06	0.0014	20.1	0.3	2	23	225	246	225	246	0.97
4	25	0.0082	1.4	10.6	0.2	3	23	254	274	252	274	0.96
5	25	7.4e-05	0.013	17.1	0.9	2	23	285	306	285	306	0.98
6	25	8.2e-07	0.00014	23.2	1.1	1	23	327	349	327	349	0.99
7	25	6.1e-05	0.011	17.3	1.0	1	20	355	374	355	377	0.95
8	25	2.2e-05	0.0038	18.7	0.5	1	23	383	406	383	406	0.95
9	25	0.0029	0.5	12.1	2.2	3	23	417	438	415	438	0.97
10	25	4.1e-07	7.2e-05	24.2	1.9	1	23	566	588	566	588	0.98
11	25	0.00086	0.15	13.7	2.4	1	23	594	616	594	616	0.99
12	25	0.14	24	6.8	1.6	1	23	622	644	622	644	0.96
13	25	0.0054	0.93	11.2	6.7	1	23	737	759	737	759	0.98
14	25	3.7e-05	0.0064	18.0	5.1	1	23	765	787	765	787	0.99
15	25	9.4e-06	0.0016	19.9	1.2	1	23	793	815	793	815	0.98
16	25	0.00044	0.077	14.6	7.6	1	23	821	843	821	843	0.98
17	25	0.00047	0.081	14.5	2.7	1	23	1251	1273	1251	1273	0.98
18	25	0.0019	0.32	12.7	2.4	2	23	1280	1301	1279	1301	0.96
19	25	1.1e-07	2e-05	25.9	1.4	2	23	1380	1401	1379	1401	0.98
20	25	0.0008	0.14	13.8	3.5	1	23	1407	1429	1407	1429	0.99
21	25	0.00027	0.047	15.3	1.9	1	23	1435	1457	1435	1457	0.98
22	25	0.0015	0.26	13.0	3.8	1	23	1463	1485	1463	1485	0.98
23	25	5.8e-06	0.001	20.5	0.5	2	23	1701	1722	1700	1722	0.97
24	25	3.3e-05	0.0057	18.2	3.3	1	23	1728	1750	1728	1750	0.98
25	25	1.4e-07	2.4e-05	25.6	2.0	1	23	1756	1779	1756	1779	0.98

Sequence Information

Coding Sequence: ATGTTGACACGTCATAATATGATCGCTGAATCTCCTCGCGTTGAAGCCATGCCAATAAATTTTGTCGCCACTGAAGATGGGCGAACGCTTCTGGCGGTGACAGAGCACAGAGATGGCACGTTGGAAATTGTTGCGACTCCAATCACATTTATTGGTCAGGGCGGTGCAGTTACATCCTTGGCAGACGTCAAGGATTCGAATACCAATTTGATATTACATTCTCctctatttcaaataaacaTGGACGATATCGATGGATCGGTGCTTGAACAACCCACGCAGAATTTAGAGATCGATCCCGCTAATTCCGAACGAGCAAAGTCGCAGCCAAATACAGATAACAAGAACAAAACTGCAACTCATGCATATCATTTCATGTGTAACGATGATTCACAGATCGAAGAAAAAGATAGGGAGACTCTCAAGGAAATGCCTGACGTGGTTAAAAGGAACAGTCCAGGAAGACCCAGGAAGAACGCAACAACATCAAAAGGCAAAGAGACCTTAAAGTGCGACATTTGTCAAAAGGAATTCACTAAGCAAACTTTATACCGAAAGCACATGGAGAATCATGCGCAGGAAAAACCGCATCGTTGTCCAAAATGTTCAGCTTCGTTTAATGTTCCGACAAATTTTACGCTGCACATGGCAACGCACAACACGGGCGAGCCGAAATGCCCAGAGTGTGGCAGAAAATTTGCAAGAATGGCTAGTTTGAAGTCTCATATGTTGTTGCACGAGAAAgaggaaaatttgttttgcaCGGAATGCGAAGATGCTTTTTCAACTAAAGCTCAATTAGATGCACACTTGAAACTCCACggagaaaaatggaaaaccgagGAAGCACGGAAGTGCAAACTTTGTAACAAACAGTTCAGCCAACCGGCTTTATATAGGCTTCATATTCGCGAACATTACAGGTTGCAGACGAAAGTAGTGAAACAAACGAAACGGGGGGCAAAACATAAGACAATGTATAAGTGCACGATATGTTTGAAGTCCTTCCAGAAACCAAGTCAATTAATGCGTCACATCAGGGTTCACACAGGCGAAAAGCCTTTCAAGTGTACAGTGTGCAGTCGCGCGTTTACGCAGAAGAGTTCGCTGCAAATTCATACGTGGCAGCACAACGGCATTCGACCTCACGCTTGCGAGCTTTGCAACGCCAAGTTCAGCCAGAAAGGTAATTTGAACGCTCACATAATGAGGGTTCACAACGTGCCCGAAGGAGAACCTATATATGGATGCAATTACTGTTCTTGTGTATTCAAAAAACTCGGTAGTTTGAACGGTCACATGAAACGCATGCATACAGATGTGAACGAGCAGGATACTACATCCAAAGACGCTCGATTGGCTGATAGCGTGGAATCTGATATTCGAGCGACTGTTGATAGCGTAATAACGCAATTGGCGTCTTTGGAATCGAGTGTGAGTCCAAATGAAGCTGCGAAACCATCGAATTTCGAAGGAAGCACTTTGTCCGGAGTCACAGCGAAAAAGGATATCCTGCAGCAAGCGCTTAAAAATAGTGGTCTTCCTAGTAAAAATAAGGGTCTCTCCGAAGGTGCATTGGAATCGAAGAAGCTGGAGGCGCGTACCAATTTCGTTACTCTATTGGATCGAGCACCTGATGGCGGTACCAGGAAATACTTGACGATAAAGCAAAGGTGCATAGGGAACGTGAGGTGGTACGCTTGTACATATTGCCACAAGGAGTTCAAGAAACCTTCGGATTTGATACGACATTTGCGCGTTCACACACAAGAGAAACCATTCAAGTGCGTCCATTGTTATCGGTCGTTCGCTTTGAAATCCACTATGATAGCACACGAACGAACTCACACAGGTACCAAAAGATACGCTTGCGGTTCTTGCGATAAAACATTCGCGTGTCACGGCAGTTTGGTCGCACATAGCAGATTACATGCGAAATCGGACGAGAGTTTCGAGGGATCAGTGAATGGTAACGAAAACGGCGAAGTTTGTTCAATAATTGGAACCGTCGGTGCTAATTCCGATACCCAGCCGAAGACTCACGCGAAAAGCAAGTCGAAACTGTCTCCGGAAGCTGAAAGTCTGGTGACTCAATTAGTTCTGCAAGAGCCATTGGTAATCAGCGATACCGGGAACAAGATATGCGTGGCGCAGGTGCCTTCGAAGGAGAAACGCGCGTACGACGCGGCGGCGGATCCAGCGAGGCCTCACAAATGTTGGGTCTGTCAAGCGGCGTTTAGGAAGATTAGTCATTTAAAACAGCATCATCGTCGGCACACGGGGGAACGTCCTTATAAGTGCACGAAATGCGACAGGAGATTCACGTCGAACAGCGTTCTGAAGTCTCATTTGCATACGCATGACGATTCTAGGCCGTATAGTTGTTCCATTTGTAACGCAAGGTTTTCGACGCAGAGCAGCATGAAGAGACATTTAGTTACCCATAGTAATAAAAGACCGTTCATGTGTCCGTATTGCCACAAGACCTTCAAAACTTACGTCAATTGCCGGAAACACATGAAAATTCATAAGCATGAATTGGCGCAACAGCAATTGGaacaacaaaaaatcgagATGCAGGAACAAGTTGAGGATAGATTAAGTTCGGAGGACGCTGCTACAGAAAGAACAGTTCCTGGATCGTCTTGCTCTTCCAGTTTTTCGATCCCTAATGCAAACGCTATTGTTGCGACGTCCTCTATTGCGGGTAACCCTTCACCTTCTCCTTTTGGGTCAGTCGAAATATCGTTTCAACCGCGGATCGTCTCCGTCTTTTCACAAGCTTTTACAGATCAATTTCAAGATGTGAACAGCGATAAAGGAAAAGTAGACCAACTTTTGCCGACGAACTGCGACTCTTCAACAATCATTAACCAAAACGCTTCGGAAATGACAGTGGCTAACATCGAAAGTTCGCAAATGCTACACGCCGACGAAACTGGTTCGGTTACTTTGCCAGTTTATTCTGGCGATCAAGCATTCACGCCGGAAAGCATACGAGAAATCGAAGAAACATTGAACCAACAGCTTTTCAACATCGGAATGAATCTTAATCTAGCCACGAACTCGAAGCATCCTGATTGCGTGGATACAAGCGACCTTGACAACGCGAAAGGACAATCCGAACAGCCAATATTAAACGTCATCTACGAAAACAACAAtagcagcaacaacaacaacaataacAGCACCAGTAACGATAACAGCAACAGTATAGTGTCTTCCGATCACGTATTCACACCGCAGCTAGATTCCTTCGAGATGGATCATATCGCCCTGCAATCGGGCACGGAAATTGGTTTGGATAACATCGGACTGGATACGAGCACTTCGACGAGCATGTCGAGCATATTGCCCAGAAGCGTGAAGGACGATCATCGGCTAACCGTTTCGGTGCAACCGTCTGAAAACGTAAACGACGACCAATCGGGACAGTGCATGCAAACGATAGTGTTCATTTCCGAGCAAAACTTGTCTGGCAAAGGCAATACGAACGAATTGGAAATAGAGGAAACGGGGAAAGATACTGAGACGGAGCAGTGCTCGATCAGTCCGATACTCATAACAGAAGAGTTCGAAGAAGCAACGCACAGTTCAAAGGTTTCCGAGGTCTTCGCGGAGTCCGTCAAAACTGTTACAACCGAATTACCTCGAGGAGAATCTCTATTACAATGTCACATGTGTTGTCAGCAAGGATTCACGACGATTGGATTAAAGGAACACTTAAAAATCCACCGCGGTACAAAGGAATATCAATGTACAGAATGCTCTTCAAGGTTTTGCACGAACGGTGGACTAAACAGGCACGCAAAATCACATACGAACAAACAATCGTGGAAATGTTCATCgtgcgaaaaatatttcaacaataAAACACAGCTACGATCGCACAGTAAAATTCACGAGACGTGGAATGAGATACAGTCTTCCGGGATAGTTGAAGATCCTGAAAGTTCAATGGCAACGGGAATCGAAACTATAAGTGCCATAGATCCCTCGTTGAACGGCGTCGTTGTCGTAGATCCGGATTCTACGGTATCTGAAAAGGTCCTGTTAGATACTGTGGCCGAAAAAGAAGTGATGGATCGAGTGCGAAATATTGctttagaaaaaaaggaacggaAAGAGTATACAAACAAGTGTAAGTACTGCCCAAAAACGTTCCGCAAGCCGAGTGATCTCATAAGACACGTGCGCACACATACCGGGGAGCGACCGTACAAATGCGATTACTGCAGCAAAAGTTTCGCCGTGAAATGCACGTTGGATTCGCATACGAAAGTTCATACCGGAAAGAAAACGTTCCGTTGCCACGTTTGTAGCAGTTTGTTCGCAACAAAGGGAAGTTTAAAGGTCCACATGCGATTGCATACAGGTTCAAAGCCATTCAAATGCACCATCTGCGATTCGAGGTTCCGAACTTCGGGCCACAGAAAGGTGCATTTATTGAAGCACGCGCGAGAGCATAAGGGTAGCCCGAAGAGGAAGCAAAAGCATTCGAAGGTCGCGGCTATAGCCGAAGTTGCGGCAGATTTTAACAAATGCCACGAGACGCAGGAGAAGATGAACAACTTCGAACAGGAGCAACAGTTGTATCAGGACCAGCTATCGCAAACGAATGCGAATTATGCGCAGTTGGAAGCGATCGGAGTCGAAGCAAACGCAACCTGCTTGACGGATCAAATAACTTTCGATATAGACGGCACTATACAGAACAACAACGCGATTCTGTCGATGAACGACGGCAACCAGCTAGTCGCGAACTTGCATTTCCTCCTCGCGAACGGCCTCGTTACCATCCAAACCGAGGAATCGTTGCTGCCGCAATCGTCGTCGATCGACAGCTCGCATAATCGGACGATTGTTTCCGATTCGTGCGCGACAACGGTGAACGTCATACCTGACACTGTAAATGCTAGCGATAATAACAAGGAAGCTGTCGTAGGACAAATGTTGAAAGTACAATCAGCGCCGTATCAATTACAACCAAACAATTGTCTCTTGACTGTCGCGACTTCGACGCAGTTGGATTCCTTTTCGAAAACTCCCGAGAAGCCTCCGTTGACGGCGGGCAAAACAAAAGGCAATCTGTCGAAGAAAGAGTGCGATATTTGCGggaaaatgtttacaaaaccCTATCAAGTCGAGAGACACAAACGCATACACACGGGCGAACGACCATACAAATGTGATTTGTGCGCGAAATCGTTCGCTCAGAAATCGACCTTGCAGATGCATCAGAAACACCATACAGGAGATCGACCGTATCCTTGTCCACACTGCGAATACTCCTTCACGCAGAAAGGAAATCTCCGAACTCACATGAAACGCGTTCATCAAGTTGACACTGTGGATGCGAAGAAGCTGAAACGTACGCGCCAGTCTCTCCTTCAGAAGCCCGAACAGGACAACTTCGCTGAAGCAAAAACTCTCAATTTGGAGGATATATCGTTTGTTGAGTTCCTGAAGTAG
Protein Sequence: MLTRHNMIAESPRVEAMPINFVATEDGRTLLAVTEHRDGTLEIVATPITFIGQGGAVTSLADVKDSNTNLILHSPLFQINMDDIDGSVLEQPTQNLEIDPANSERAKSQPNTDNKNKTATHAYHFMCNDDSQIEEKDRETLKEMPDVVKRNSPGRPRKNATTSKGKETLKCDICQKEFTKQTLYRKHMENHAQEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWKTEEARKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGAKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRAFTQKSSLQIHTWQHNGIRPHACELCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEQDTTSKDARLADSVESDIRATVDSVITQLASLESSVSPNEAAKPSNFEGSTLSGVTAKKDILQQALKNSGLPSKNKGLSEGALESKKLEARTNFVTLLDRAPDGGTRKYLTIKQRCIGNVRWYACTYCHKEFKKPSDLIRHLRVHTQEKPFKCVHCYRSFALKSTMIAHERTHTGTKRYACGSCDKTFACHGSLVAHSRLHAKSDESFEGSVNGNENGEVCSIIGTVGANSDTQPKTHAKSKSKLSPEAESLVTQLVLQEPLVISDTGNKICVAQVPSKEKRAYDAAADPARPHKCWVCQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHDDSRPYSCSICNARFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQQQLEQQKIEMQEQVEDRLSSEDAATERTVPGSSCSSSFSIPNANAIVATSSIAGNPSPSPFGSVEISFQPRIVSVFSQAFTDQFQDVNSDKGKVDQLLPTNCDSSTIINQNASEMTVANIESSQMLHADETGSVTLPVYSGDQAFTPESIREIEETLNQQLFNIGMNLNLATNSKHPDCVDTSDLDNAKGQSEQPILNVIYENNNSSNNNNNNSTSNDNSNSIVSSDHVFTPQLDSFEMDHIALQSGTEIGLDNIGLDTSTSTSMSSILPRSVKDDHRLTVSVQPSENVNDDQSGQCMQTIVFISEQNLSGKGNTNELEIEETGKDTETEQCSISPILITEEFEEATHSSKVSEVFAESVKTVTTELPRGESLLQCHMCCQQGFTTIGLKEHLKIHRGTKEYQCTECSSRFCTNGGLNRHAKSHTNKQSWKCSSCEKYFNNKTQLRSHSKIHETWNEIQSSGIVEDPESSMATGIETISAIDPSLNGVVVVDPDSTVSEKVLLDTVAEKEVMDRVRNIALEKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCTICDSRFRTSGHRKVHLLKHAREHKGSPKRKQKHSKVAAIAEVAADFNKCHETQEKMNNFEQEQQLYQDQLSQTNANYAQLEAIGVEANATCLTDQITFDIDGTIQNNNAILSMNDGNQLVANLHFLLANGLVTIQTEESLLPQSSSIDSSHNRTIVSDSCATTVNVIPDTVNASDNNKEAVVGQMLKVQSAPYQLQPNNCLLTVATSTQLDSFSKTPEKPPLTAGKTKGNLSKKECDICGKMFTKPYQVERHKRIHTGERPYKCDLCAKSFAQKSTLQMHQKHHTGDRPYPCPHCEYSFTQKGNLRTHMKRVHQVDTVDAKKLKRTRQSLLQKPEQDNFAEAKTLNLEDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -