Pmec001001.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000001.1:7392770-7396662[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.086 3.5e+03 -1.2 0.9 58 116 385 442 369 452 0.56 2 2 2.9e-101 1.2e-96 324.0 7.4 1 218 725 935 725 935 0.92
Sequence Information
- Coding Sequence
- ATGGAATCGCCTTCGGCTCAAGAGCGCGTTGTCGCGGGTCAAGAAATTCCCAGTTCGATAGAATCGCCGGGAATCGCTACCCCATCGGCAACGACAACCGGAGAGCTCGGGCTCGAAGATGGGAACGACGCACCGCCCGCGGCTGCCGCTGAAGGAACGCATGATGCCGTGGACTCCGGCCGCGAGTCCAACGATGGCCAGGAACTCGCCAGTTTAGGGTCCGCACAATCTCCAATTTCTTCTGAGGTCTCCAGCGAGTTCGACCCTGTTATGGGCTCGAACCCAAACAAGGAAACCCATCAGTCAGCCGAGGCTGCGGAGTCAGAAGCTAAAGCGTGCAATCAGGATAGGGAGGAGAATCTAACCAGTTGCTCAAACTCATGCGGAGACTATCCCGTGACGGTGTCGACGCTGGTGCCTAGTGACAAAGGGGAGGAAAGGGTGGTCGGGGGATCGGGGGTGTCGTCGTTATCCAGGAAGAGGCCGGCCAGCGATTTCCTGCCGATCAACGCGGAGATCAAAAGGATCGGCGTTCAGGTGCCGAAAACACAGGCGAACGAGCCGCGAAACGACGCCAGGAGGATCTCCCCGGTGCTGGTGAGCCTCCGCGAGAGGACTCTAGGCGAGATCTCCCTGTCCCCGGACCTCTTCGACGACGACGTCAGCGGCCGGTGCATCGCCAGGAATAGTAGAATATTCGACAGTTCGTTTAGCAGCGCCTGCAAGCTGAAAACGAGTACGAGTCTAGATAGTTCGGCGCAGAGAAGCGATGCGACTGAGACGGACGCGAAACAAAGAATTCCCAGGGTGGTTTCCCAGGAGGAGGATGTCGCGAACGGTGTCGAGAGCAGGAGAGACATCTGCAGGAAGCTCGATTTCACTGAGAATGTGTTCATAAATGAGGATTCTTGTTGTTCGCTGCCGCGCGAGAGTCCTGATAGGGACTTGCAGCCTTGTCAGGAGAAGCAGTGCGAGGAGCCGATCGACCCGAGCGCGTACGAAAGCGTGCCGCTAACGAGTGATAGCGTTTGCTCGCCTGAGAAGAAGTCCCAGCAGCCGGATAGCGCGACGAAGACTTCAGTTACGTGTCCGCATGCGGTTGTCATGCTGGAACGCATTAACGTGTCCAGCTGGATGAGTCCGGATAGAAAAGATAAGGAAAGGTCAAAGAAAGTCGCTTGCGAAGACGGTGCCAACAGCGCGGATTCGAGGACGGAGTCTAAAGATTCGCCGAAGGAATCGCGCGTTGTTCTAACGTGCGTTTCTGAGAAACAGGAGGATAAGGACGCCCAGAAGATAGATGAGGGTCAGTCGAAGCAGCCAGCAGCTTCTCCTGTGGAATCCAGGCCGGGAACTGATAATTCTAACTCGGAGCAGTGCGATGTGCACTCTATGACGGATTGCAAAGTGATATTGGAGAGGGTGGTGTCTCCTAAACTGACGAGATTGCCGGTCGCAGAGTGGAACAAGGAAGATACGTCGCCCAAGACATGTTTAGAGAAAGTCGATGTTGCGTTGTCCCCGTCAACCGCGAAGAGCGATCAGCCATTGCATAACGTGGCTGAGGCGACGCCGAACTTGCCAGAAGAGGTGCTAGAACCTTCCACGGACGTCTCAGAAGCCATCGATACTGAGACGGAGACTGAGACAGGCTCTGATAGCTCTGAAGTGTCGATGACTAATGTTCGCCTCCGCGGCTCCGACGACGACACCGTCTCAGACCAGGTGTCCTGCCCGGAAAGCGAATCCATGTGTTGCGTGGATATCAACCCGGAGATCATCACCAGGTTGGAGGCTGAGAGGCCCGAGGCTTTCACCGAGGACTCGGCGGAGAGTCTAGCGCTTGCGACTGGTGCTAGGGACGAGGTCAGGTCGGATGGCAGCGATTCTGGACTGGGAAGCGAGATTCCTGGGGATCCTGGGCCTGCGCCGGCTCCGGAAAGCGATTCTGAGACTTCTTTCTTGGACAGGATACCTGATGATATTCTTTCTGACAAGGAGAAAGCTGTGAATCAACTGGACTCCTTCGTGCCCAATCCCGTCGTTCCTGGTACACCACAGACACCCTTGACGAATTTCCGTTCGCCCCCGAAAAGCAATCTGAAGAGGAGATTAACCGATTGCATGGAAGGTACTCCTAATCCGAAAAGAAGCAACACGGATGAACCGATGAAGAAGAAACGCAATATTCATTTCGACGCCGTCACAGTTTACTATTTCCCTAGGGCTCAAGGTTTCACCTGCGTGCCTTCCCAGGGTGGTAGTACATTGGGCATGAGCGCGACGCACACACACGCCGAAAGGTTCTCGTTGTCCGAACACGCAGCCGAGCAGAGAAGAATTCATCGCGCCAGATTAGCTCAGTTACGCTCCGAAAGAGCCGCGAACTGCGTGACCGAGGCGGCTTCCAGCTCGGAGGATCCCAGCGACGACACCGACGAGGAGCCGAGTGACAACGAGGACCTGGACATCGACAGCTACTACTTCCTGCAGCCGGTGCCCACGTGGCAACGACGAGCTCTGCTCCGAGCAGCAGGGGTGCGTAGAATCGACGCCGTGGAGAAGGACGAGTGCCGTGACATTCGAGCCAGCAGGGAGCACTGCGGCTGTGGGTGTAAAGGTTACTGCGATCCTGAGAGTTGTCCTTGCAGTCGGGCGAACGTAAAGTGCCAGGTCGACCGAGCAGGTTTCCCGTGCGGTTGCACCAGAGACGGCTGCGCGAACAGTTCGGGGAGGATTGAGTTTAATCCGGTGCGCGTCAGGACGCACTTTATTCACACGTTGATGCGGTTGGAGCTGGAGAAGAAGCAGCGGGAAGAGGACGGCGCGGATCACGAGGCTTCTGACAATCAGAATGGTAGAAGTCCCTTGAGGGAGATCAGTTTAGGGTCTGTGATGGAGAATAGGAATAACGCGGAGTCGTGCCTGAACGGCGGCGGATTTACGACGCTACACTATGAGAATCACGACGCGACAGACGGCGGGAATTGCCAGCCGGAAGTGCCGGGAACCAGAGAAGACAGCCTAGATCTGTACGCGATCAGAGACGATTGTTATCCTAGCGAAGACACTGTTGACGGTACGCAGGGACCTCAGAGGAAACTCCATCCCGAGTTTAGCCAAGCGTTTCAAACGTTCTCCGCGCAAACTAGCGCCGGGGTGAACTTCCAACAGCCCGCGTATCAGGATTACCAACCTTATGCCAATCTTCCTTCTACGTCCAGAGTGCAATTCCCGCCACAGTTCCAGCCAGTCCCAGGAAATCCAGGGTTCTCGCATTACTCGCCTTATGGACAGGATGCTGCGTCTCTTCAAGGGAACTGCCAAGTACATCCCGGGCAACATTCTTCTGGCTACGAGACCAACTTTGCTCAGGACGATGCTGCCGGATCCCAATACACGAATCTGAACTCGGTACAACCGATGAACCCGGTCCAGCAGATAGGTAAATTGGAACCATTTTCGGAACTTCTGTCTGGCAGATACTCGTATTACGGCGAGATGGAGCCGCAGGCGCACGGTACTTATCACGGGAACGGGACGAAGGTCGACGTGGAGAAGGGCCAAGGGAACGAGCAACAGTCGGAGAGCACGGAGGAGTGCGACGAAAATTTTGGTGAGATTATAAAGAAATCGATGGTTGAGACGGTGTCCGCTTAG
- Protein Sequence
- MESPSAQERVVAGQEIPSSIESPGIATPSATTTGELGLEDGNDAPPAAAAEGTHDAVDSGRESNDGQELASLGSAQSPISSEVSSEFDPVMGSNPNKETHQSAEAAESEAKACNQDREENLTSCSNSCGDYPVTVSTLVPSDKGEERVVGGSGVSSLSRKRPASDFLPINAEIKRIGVQVPKTQANEPRNDARRISPVLVSLRERTLGEISLSPDLFDDDVSGRCIARNSRIFDSSFSSACKLKTSTSLDSSAQRSDATETDAKQRIPRVVSQEEDVANGVESRRDICRKLDFTENVFINEDSCCSLPRESPDRDLQPCQEKQCEEPIDPSAYESVPLTSDSVCSPEKKSQQPDSATKTSVTCPHAVVMLERINVSSWMSPDRKDKERSKKVACEDGANSADSRTESKDSPKESRVVLTCVSEKQEDKDAQKIDEGQSKQPAASPVESRPGTDNSNSEQCDVHSMTDCKVILERVVSPKLTRLPVAEWNKEDTSPKTCLEKVDVALSPSTAKSDQPLHNVAEATPNLPEEVLEPSTDVSEAIDTETETETGSDSSEVSMTNVRLRGSDDDTVSDQVSCPESESMCCVDINPEIITRLEAERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKEKAVNQLDSFVPNPVVPGTPQTPLTNFRSPPKSNLKRRLTDCMEGTPNPKRSNTDEPMKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVTEAASSSEDPSDDTDEEPSDNEDLDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEDGADHEASDNQNGRSPLREISLGSVMENRNNAESCLNGGGFTTLHYENHDATDGGNCQPEVPGTREDSLDLYAIRDDCYPSEDTVDGTQGPQRKLHPEFSQAFQTFSAQTSAGVNFQQPAYQDYQPYANLPSTSRVQFPPQFQPVPGNPGFSHYSPYGQDAASLQGNCQVHPGQHSSGYETNFAQDDAAGSQYTNLNSVQPMNPVQQIGKLEPFSELLSGRYSYYGEMEPQAHGTYHGNGTKVDVEKGQGNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -