Pmec009297.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- CAMTA2
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000004.1:5788102-5797893[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-43 4.2e-39 134.0 0.7 10 116 44 148 40 148 0.98 2 2 0.7 2.9e+04 -4.1 1.6 20 20 319 319 293 354 0.55
Sequence Information
- Coding Sequence
- ATGTCAGCGGTGCTGTCTGAAAAGTGTCTACACGTTCCCTCGATTCCGCGTATCCTACTTCTCTCGAGGTTGCCTTATCCTCATCTCGAGGAGTTTCGAATCGCGCTCTTCGATTCCGTTGCGCACTGCGATGAAATTGCCGCCATCCTAATCAGTTTCCAAAGACACGTGGAATGGCAGAGTCGGGAGGTGAAGGTACGACCACGGAGCGGTTCGATGTTACTGTACTCGAGAAAGAAAGTTCGTTACCGGCGGGACGGTTATTGCtggaagaaaaggaaagatgGCAAAACCACACGGGAGGATCACATGAAACTGAAGGTCCAGGGAGTCGAGTGCATCTACGGCTGTTACGTGCACTCGGCGATCCTTCCGACGTTTCATCGGCGATGTTATTGGCTACTTCAGAATCCCGACGTCGTCCTTGTTCACTATTTAAACGTTCCTTACCCGGACGGTGATGCAAAGCTAGCGGCGCTGCCACCGTGTCTCGCACTGCCGCCAGACAAAAAGGAGTGGACGCGAGACGAGCTGGCTTCTCAACTTCGACCCATGTTCCTCGGTGGAGATGACGATCCGAACAATCCTCATCTCACACAACACTCGAATCATCCCGTCGACATGATAGTTTCTCAGCTGTTGGACAGGCAGCGAGCATCTTCCACTTCCTCCACCACCAACACTCAACTCGCACCCAGGAGACTAACACCGGACAATCAGGTTACTTCGACTACCGGAGGTCAACAATCGTCGACGACAGCCTCACCAGCTCCTCGCGTATACTCGAGACATTCCCACACGACTCAAAGCCAACAGCCGGCTCCTTTAGTGTTAAGTTTGCAACAAATCCAAGGCGGCGGCGGTCTTCTGATATTGAATAGTCAACCGTACCATCAtcaacaacaacagcagcagcaacaacagcagcagcaacagcagcaacaacaacaacaacagcagcagcaacagcagcagcagcaacaacaacagcagcagcaacaaagTCAACAAGTGGAAATGCAACAGGTCACGGAGCAACAAATCGTGCAGCAGACGAGCGTCGACAGGGAACAACAGACCCAGCAGGAGATCGACGCGCAGGAGAGCATGGATCGCTCCGCGGTACAGTCGTTGCCGATTGGCGGCACCGTCACCGAAGTCACCGATTTCGCCGAGACGTTGGATCTGAGTCAAGAAGACATTCAGCGAACGTTGTCCGCGAACATGGGGCCCCCGTCTCCGTCTCCTTCCCCGGCGGACAACAGCATGATCAATCCGATGGATTTCATCGACTCCTCGGACGACGTGCTGGTCAATCTGGACGCGTTCGACGTGTTCGGCGATCTGCCGGGGCTTCAGGATTTCGAGACGGAGCAGACCAAAGCCGAGGAACGAGGTGGGTCCGAGAACGACGTGGGATGTCATCCTGGAACAACCGTCCATATTGCTGAGTACAGTCCGGAATGGAGTTATACAGAGGGTGGCGTGAAGGTGCTGGTCGCCGGTCCTTGGACTGCGGGCAGTAACTCTCAATCGTACTCGGTGTTGTTCGACGCCGAACCGGTCGAAGCGTGCTTGGTTCAGCCGGGCGTGTTGAGATGTCGTTGTCCTGCTCACGCCCCGGGGATAGCGTCTCTTCAGGTCGCGTGCGACGGCTTCGTCGTTTCCGATAGCGTCGCTTTCGAATATCGAAGAGCACCGACAACCGAACCAAGCCCCGAGAGAGCTCTTCTGGATCGCTTGGCAGACGTCGAGTCCCGTTTGCAAGGACCCGGTCCGCCGTCTCCCGCGGCTCATCTCGAGGAGCGACTAGTGGCGTACTGTCAAGATGCTGTTGTCCGTCCTTGGCGAGCCGGAGCGGAACCTTTACAATCCGGTGGTCCTACGCTGTTGCATTTGGCCGCTGGTTTGGGCTACTCCAGGTTAGCCTGTGCGCTCCTTCACTGGAGAGCCGAAAATCCTAGTAGCGTATTAGATGCCGAAGTCGACGCCCTGAGGCAGGATAGCGCCGGTCTCACGCCGCTTGCTTGGGCGTGTGCAGCGGGACACGCGGATACTGCCAGGATTCTTTATAGATGGAACGCGATGGCGCTTCGCGTGCGAGATTGCCAGAACAGAACCGCGACCGAGTTAGCAGCAGAGAACGGTCATACAGCAATCGCGGAAGAATTGAATCAGCTCGAAGCCAGAAGGCAAGACGAGAGGCTTTTCTTGCGACCCGCCAGCCCTAGTCCTAGGAGGCCATCGCAAGACAGCGGTCTCGATCTGGCGTTGTGTGGCTCGCCGCTGCTGGACAACATGGAATTGTTGCAAGAGGATGACTCGTCATTAGCCCTCAGCGAGCAGGGAATGGAAAGCGCTCCGACCCCTCAGGAGACTGTAGGGGAGGAAGACGCGAGGGTGCTGACATTGGCTGAGCAAATTATAGCAGCGCTACCGGAAAGGATCAAGCGAGGCGAGGATTCTCCGTCTTCTTCCTCGCCACCTCCCCCCACTGCGCCCTTGTCGCCACTGGAGGACGCTCTGATGGAACAAATGCCGCTCGATTCCGGAGAATTGTTCGACTCGTACCGCGACTGCAGCGGAGGAGCGGCGTCGGTCTCGGACGTCGACGCGGACGCCAGTCCCTCGAGCCCGTCTAGCAGCTGCCTCACGCCGGACTCGCCGTCTCCACCGCCCACCACCGCCGATTTCTGCGAGTTCTTGCAGCTGCAGTTGCAACTGGACGGCAACAACGGTCACAACGGCCAGTACTATTCGACCGGCGGAGATCGCAAGTTCGGTAACGTGATCGGCTCCGGGATTTGCGGGACTGTGACAGGTGGGGGTAACGGGACCGGCGACGGAAGCGAAGCGGACCTGAGCCGGCTCACTTTGTCCGACCGGGAGCAAAGAGAGCTCTATCACGCCGCTAGAATGATCCAGAAAGCTTACAGAAATTACAAGGGACGTCAGAGGCAGGAAGAGGCCGAACGACACGCCGCCGTGCTCATTCAGCAATATTATCGTCGACATAAACAGTACGCTTATTATAGGCAAGCCACGAAGGCCGCCCTGGTGATACAAAGTAACTACCGGAATTATCGGTCTCGGCCAGGCTCGGCCAGCTCGAGGCAGCAGGCAGTTCATCAGCAGGCTGCTCATCAGGCCGCCAGGAAGATCCAACAGTTCATGCGACAGTCGAAAATCAAGCTGCAGAACGCCAGGGCCGCCGCAAGCGGGAACGGGAGGCCGCCAGCGGGCATTTTACGGGCGGTTGCTGCCCCCCAAAGCTCGCCCTCATCTAGCCCAGGGGTCAGCCTAGTAGCCGTCAAGCCAGAGGTCACTTAA
- Protein Sequence
- MSAVLSEKCLHVPSIPRILLLSRLPYPHLEEFRIALFDSVAHCDEIAAILISFQRHVEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPNNPHLTQHSNHPVDMIVSQLLDRQRASSTSSTTNTQLAPRRLTPDNQVTSTTGGQQSSTTASPAPRVYSRHSHTTQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQVEMQQVTEQQIVQQTSVDREQQTQQEIDAQESMDRSAVQSLPIGGTVTEVTDFAETLDLSQEDIQRTLSANMGPPSPSPSPADNSMINPMDFIDSSDDVLVNLDAFDVFGDLPGLQDFETEQTKAEERGGSENDVGCHPGTTVHIAEYSPEWSYTEGGVKVLVAGPWTAGSNSQSYSVLFDAEPVEACLVQPGVLRCRCPAHAPGIASLQVACDGFVVSDSVAFEYRRAPTTEPSPERALLDRLADVESRLQGPGPPSPAAHLEERLVAYCQDAVVRPWRAGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSSVLDAEVDALRQDSAGLTPLAWACAAGHADTARILYRWNAMALRVRDCQNRTATELAAENGHTAIAEELNQLEARRQDERLFLRPASPSPRRPSQDSGLDLALCGSPLLDNMELLQEDDSSLALSEQGMESAPTPQETVGEEDARVLTLAEQIIAALPERIKRGEDSPSSSSPPPPTAPLSPLEDALMEQMPLDSGELFDSYRDCSGGAASVSDVDADASPSSPSSSCLTPDSPSPPPTTADFCEFLQLQLQLDGNNGHNGQYYSTGGDRKFGNVIGSGICGTVTGGGNGTGDGSEADLSRLTLSDREQRELYHAARMIQKAYRNYKGRQRQEEAERHAAVLIQQYYRRHKQYAYYRQATKAALVIQSNYRNYRSRPGSASSRQQAVHQQAAHQAARKIQQFMRQSKIKLQNARAAASGNGRPPAGILRAVAAPQSSPSSSPGVSLVAVKPEVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00938012;
- 90% Identity
- iTF_00141220;
- 80% Identity
- -