Pmec034014.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- Trerf1
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000022.1:2481995-2495454[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4 1.3e+04 -2.4 0.2 30 42 678 690 676 691 0.89 2 2 1e-11 1.8e-08 35.5 0.0 2 46 843 887 842 887 0.96
Sequence Information
- Coding Sequence
- ATGCATAACTCGGTGCCGAGTGCATCGGTGCAATTCAACGAAAAGTGCGATAAGACGGCACTGGTTATGGAGGGGGAAATCCCACGACACGTGGCTTGGCGCGCCGGAGTTGTGATACGCCTAAAAAATGGCGGGATAGTAACGCACGCGAGGGTCGCCAAGCGGCTTGGCAAGCGCCGGGCCGAGTCTCCCTTCCTCAGGCCAACCAAGCCCGCAGCAGACACGAACGCGAATCAACAGCCGCGCACAAATACAGTTTTCACCAGCCAAACCGACAATGCGTCGCAGATCGTTGGAAAAACGAGCTTCGCGGTGCCTGCACCGCCACCGTTGGCCTCTGGAGACAAAGTCCGTCGGCTTTCGGATGGCGAACACTTCCGACAGCCGAATGTCACCGTCGGTGGACACGCGACCGTGCAGAAACAACTGCAGGAAGCGCAGACACAGGCACAGGCGCAGGCGCTGGCCGAAATGATCTTAAAGGGTACTACGAAAATGGCTGTGAAGAGGACGACATCAGATCCTGGACAGAGATTACACCTGACATACCAAACGTCGGTGCAGCCAACGACCAaccagcagcagcaacaacaacaacaacagcagcacCAGCAGCatcagcagcaacaacaacagcaacagcagcaaaCCACGCAACCTCAAGCTCAAGCCGCTGTCACGGATAGTTTCTCTATGACAGGCTACTCTGAAGATGGTGGTTATTTTAGTCCAAGTCTTCAAGATGAAGTGTTCCAGCAGGTCACTGCAGTTCCTGACAGTGTCCTGCTTCATGCGACTCAGTTAGATTCACTCCAGTTTCAGACAGCAAGTCTGCTACAGGAGCAAACCACAGAACAACTACAGGACATCACTCTGGAGGATCGATACTCGTCACAGCACACCGTGAACCCTGACCTTCAGGCTCTGGTGAACTCCCCGTTGCCCGACTCACTGGCCGAATTCAGTACTTACGGTGCCCAATACACCGAGAGCCCACATACCTTGCCCACCCAGTCCCCGTTGCCATCACCTTTGACCAGACACGACAGTCCCAGTTTCACATATCCGACACCGCCCGCGAGTCAAGAGGGTCTCCTGACAGGGAGTCTGCCTCTGCTGAGCCCGCAGGAGGATCCAGAAGGGGTGAGGCAGGTATCGTCACCTCTTTCAGCGGCGTTTTACACGACGACCATGTCCTCCGCAGCGGCGGTAGAAGAAGCCCTTAGCGAAGTATTGCCAGGCGAATCCGACGCGGATGCGGACCTGTATGGGTCTGGTTCACCCAATCCCCATTCGCCACTGCCAAGTCCTTTATCGGCAACTCCAGCACCGTCGCCATTGTCCTCGTTACCGCCGTCCTCTGTCTCGTCGCCAGGACCAGTGTCCTTCACCAGCACCAGTTTCCCCGTGTCTCCGCATCATGCTCTTCAGAGCCAGATGATGCCCAACTCGGAGGACCCGTTGCTGTCATCGACCCCGAAGGATTTCACCACGGCAAACCGTCGACGATTCGAGTTCCAGTCCTACAAATTCATCACCAGTCAGAACTTGGTGGATTTCGGCCTGGGAAATGGCAGTCTGGCCGGGATCGTGGTGGACAACAACGGCGAGTTCAAACTCATACAGACTGCGGGGCTTCAGAAAACGAACGTGCTGGTCCAGACCGGCGCCATGAATCCCGCGCTGACCTTCAAAAAAGAGGTGCGCCTGGCGACTCCCAAGGTGGAGCCCGTTACGGTAAACCTCGGCCTAAACGTGCAAACGAATCATCAGTATAACGCTGGACAATTCAATCAACAGCAAGTGATCAATCCTACCAAATTTCTTATACAAACCAACGCAGCGAAGAACAGCAACTTAAGGCAGAAGACACCTGGCAATCTGCCTATCCCGGTGGAACAGATCAAAGAGGAACTGCTCGACGAAGATGTCTTTCTCAACCCAAGCAGCATACCGACTGGCAGCCCTGTACGGCACTGTAGAAAAAGACCACGCATGGATGGCAGTCTGTACGCTAATTCAACTCATTCGTATCCCTCGAGATTGAGGAAAGCCTGTGACCGACATTGGGACAGCAGCTACACTCCGCCACCGATTTTGGACCCTTCCCGTCCTGGCCCAGGACTGTACGCCAGACTGCATCAGTACGAAAGGGACTCCGACTTCAGTTCGGATGACTCTCAAGGAAACGATGGACCACCGCCTAGGATTAATATCGGCACGAGATATCAGGCTACCATCCCGCCAGTGGGGAGTGACGGGGATAGAGGAAAGGGAGAACCCGAGGCTGACCACTTGCTCTGGGACCCTGGTATAAACAACGTGCTGACGGATAATGAACtgGAGATGTATCTGCAATTCGCGTGCTGTGCCGCTGTGCCAGGTGGAGGAAGAAACAAGGAGTACGCGCTTCATCTGCTGCACATGTGCAGAGGAAATATTCATGAGGCGATGCTAAAGCTGATGAGACCAACGCCCATGTTGCCAGCAGAACATCCGCTACTAAGTTACGAGTGCCAGGAATCGGATCGATGGACGTCTCACGAGATGGACGCATTCTACCAAGGGCTTATGAAGTACAATAAAGACTTCTCTGCGATTTCGCGAGACGTGGGTGGCAAGACCGCGAAACAGTGCGTGCAATTCTACTACCTTTGGAAGAGGCTTTGCCCGGACGAGTACAAGAGGCTGCGTGTTCGCCATGGAAAACCAAAGATTAAGACAGAGAACAAAGATTGTAAAGACACTAGAGAGCTACGCGATGCTATCGCCTCCGTGACGGAGATGGACTTTAGTGAAGACAAGTCGATTCTTCATCGTACTTTGTTACAGACAaacgagagagagaactcGGCTACCCTGACCACCAGCGACGGAGAGCTGAGATTATTTGCATACGACTGCCCTGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCGCACATGAAATCCCACAGGCCTGTACCCTCGCCCGATTCAACGGGTCAGGACTCTAAGCGGCCCGTCCAGCAGCAAACGAAGGCGCAGCAACCCCAGCAGCTCAGTAACCAACAGCCGCGCCAGCTACAACAGCAGCATCTGCAGCAGCAGTCGCAACAGCAACCGCCGCAGCAGCAACAGCCGCAGCCGCAACCACAGCAGCAGCCAGCGAGCAACGTTTCACCGCAGACGCCAGATTTCAATCAGCAGCCACTGCCTCCCAGCAACGGCGACACCGGCGCTCAAAACGCGGCGCATTTATGGCATAACCCGACGCGGCTTAGGCCACCATAG
- Protein Sequence
- MHNSVPSASVQFNEKCDKTALVMEGEIPRHVAWRAGVVIRLKNGGIVTHARVAKRLGKRRAESPFLRPTKPAADTNANQQPRTNTVFTSQTDNASQIVGKTSFAVPAPPPLASGDKVRRLSDGEHFRQPNVTVGGHATVQKQLQEAQTQAQAQALAEMILKGTTKMAVKRTTSDPGQRLHLTYQTSVQPTTNQQQQQQQQQQHQQHQQQQQQQQQQTTQPQAQAAVTDSFSMTGYSEDGGYFSPSLQDEVFQQVTAVPDSVLLHATQLDSLQFQTASLLQEQTTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPEGVRQVSSPLSAAFYTTTMSSAAAVEEALSEVLPGESDADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTSTSFPVSPHHALQSQMMPNSEDPLLSSTPKDFTTANRRRFEFQSYKFITSQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKTNVLVQTGAMNPALTFKKEVRLATPKVEPVTVNLGLNVQTNHQYNAGQFNQQQVINPTKFLIQTNAAKNSNLRQKTPGNLPIPVEQIKEELLDEDVFLNPSSIPTGSPVRHCRKRPRMDGSLYANSTHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPVGSDGDRGKGEPEADHLLWDPGINNVLTDNELEMYLQFACCAAVPGGGRNKEYALHLLHMCRGNIHEAMLKLMRPTPMLPAEHPLLSYECQESDRWTSHEMDAFYQGLMKYNKDFSAISRDVGGKTAKQCVQFYYLWKRLCPDEYKRLRVRHGKPKIKTENKDCKDTRELRDAIASVTEMDFSEDKSILHRTLLQTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQTGNTGHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPVPSPDSTGQDSKRPVQQQTKAQQPQQLSNQQPRQLQQQHLQQQSQQQPPQQQQPQPQPQQQPASNVSPQTPDFNQQPLPPSNGDTGAQNAAHLWHNPTRLRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01068231;
- 90% Identity
- iTF_00360843;
- 80% Identity
- -