Basic Information

Insect: Perdita meconis
Gene Symbol: SNAPC4
Assembly: GCA_030770465.2
Location: JASKOS020000014.1:7384631-7387165[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 7.2 1.2e+04 -2.4 0.0 8 19 94 105 93 112 0.83

2 6 0.36 6.1e+02 1.8 0.0 3 17 115 129 113 130 0.93

3 6 2.7e-11 4.6e-08 34.2 0.5 1 45 216 262 216 263 0.95

4 6 1.2e-06 0.002 19.3 0.9 4 42 273 315 271 317 0.96

5 6 8.9e-13 1.5e-09 38.9 0.0 1 45 325 370 325 371 0.96

6 6 1.3e-10 2.2e-07 32.0 0.6 3 41 380 418 379 419 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	7.2	1.2e+04	-2.4	0.0	8	19	94	105	93	112	0.83
2	6	0.36	6.1e+02	1.8	0.0	3	17	115	129	113	130	0.93
3	6	2.7e-11	4.6e-08	34.2	0.5	1	45	216	262	216	263	0.95
4	6	1.2e-06	0.002	19.3	0.9	4	42	273	315	271	317	0.96
5	6	8.9e-13	1.5e-09	38.9	0.0	1	45	325	370	325	371	0.96
6	6	1.3e-10	2.2e-07	32.0	0.6	3	41	380	418	379	419	0.96

Sequence Information

Coding Sequence: ATGACTCACGATAAATTTCAGTGtcaaattgaaaatcaatttgtAGAATGCGATATCGAAGATTACGATCGTACATTGAATTTGAACAAACAAATAGTTACTTATCTATTGGATTTGAAGAAACACATAACCTCTGCTCTTGCAATATgcgaaagaaaattaacaacCGTGGAAACGAATCTGCGAAATCATCAAACGAACGGAGACGCAAAGATTGCTATTTGCAACGCCGGAATTCCTTACTTCAAAGACAGAGATTACTTTTATGCTCCCAATAATGAGGACGAAACGTTCAAGGAGGCCCAAAAAGAATTACAGATCAGAAATCTTCCCAAAGTTTGTTCGTGGTCGTCGAAAGAAAGGAATATCCTTTTCAAGGCGGTACAAGACGAAGCTATAGTGGATGCATTAGATACGGAGAACATAGAACGGGTACAGCGTGACTGTGCGACATCTAAACCAACCACCAAAAGACGAAAAAACACGAAGAAACAGTTTCCACCAAGAGACACCAAGCAAATGATTGAATCGTTTCGACAAAAAGAGTTCAATTGgttcaaaatatcaaatatttatttcaaggaCGTACACTCGCCGCTCGATTGTTGCGTCATGTGGAATGTTTTTCTTCATCCTGACGTTAATAAAAGTTGTTGGACCAGATCGGAAGATTCTAGACTAAAGGAAGCTGCTAAAAGgtataaatatcaaaattggGATGGAATTGCTAAAGAATTAGATACAAATCGAACAGCGTATCAATGTTTCATTAGATacaatacaacaaaaaaattaccTAAGCCTAGAAACTGTGTTTGGGAGAACAAAGAGGATAAGAGACTTTTAAAACTAGtcgaaatatataaaattggcGATTTTATTCCTTGGGGAGAGCTAGCTGGTTGGATGCGAAACAGAACCAAGCAACAAGTATACTTTCGATGGACTTACAGTATAGCACCCAATTTAACAAAAGGTAGATTTAGCAAAAGCGAAGATGATATTTTGAAAGACGCAATCATCAAGTATGGCACGAATTTTCGCAAGATATCAGCCGCCTTGATACCTAACAGATCGACCGTCCAACTTCATGATCGTTATCAAACTTTAACGACTaaccaaatgaaaaattggagGGAATGGACGCTCGCAGAGGATTCAAAGTTAATAGAATTGTTCGAATGTCACGGATCGAATTGGTCTAAAATAGCTAAAGCGTTCTCGTGCAAAACTAGGACTCAATTGCGACATCGACACGCAGCTTTGCAGAAATACAGTAAAAGAGGTATTTCCATATTCGATTTAAATCGGACTCGTATAGAGAACGGGAACGAGGAACGTTGCCAGGTTCCTCCAGCCAACAATTTGGACCGTAGCGTACCAAACGACGACGTCGATAAGGAActgatagaatattttcacgCGGAGTGTATGTCAAAAAGATCTGATCGTAAACGAAATGTTTCCGCCGTCGCAGATGAGGCTAGACATCGTGTAACGAATTTATATAGAACTTTACGATCGTTAAACGCTAAAATTTGTATACCCAACGACGCGAACGATTTGAGAGTAAACGACGAAACCAGGCAACTTTTGTGTTCATTAAGAAACTACGTAAATACGAAGAACGACGGGCAAAGATATCTCGAAATTTTAGATAAATGTAGCACGAACATGTTTGGAAGGGACTACGCTGTCGTAGAAGAAGGTTGTTCTCGTTTTGTGCCACCGCTCCCTTTTGATACACggatcaaatttaaaaaatcaagtgAATCGCAATACATCGATTACAACTTGAATAGAAAAAGTATCTTTTTAGCTGAGAAACCGAAAAACTTTGCTACTCCGGACTACGTAATATCTCAGATCGGTGGTAACGAGCAAGAACTGCAATTTCAAAAGATCAGTCGTTTACTCGAATTTCAAGGATCCaaagaatttcaaagaaaCACACAAAACTTTTCCACGTTTCCGATCGAAATATTCTCGCGACGGAGTAGTAGCAACGGTAACAATAATATAGACAGAAGCGGTAACGCGTTACAAAAAATAAGACTGCAGTCCGTTCTTGGTTCGGAAAGCATCGCCGACTCTCGGGAGTGTGCAACATTACACGCTAATCGAAATTCCAACCAATCGCTCGAACAAAATAGAAATCCTATCGCGCTGTTTACCACGTTCGAAAACGTGCAACATATCGTACCGGTTGTTTGTAACGCGGAATCaacttttaaagaaaaagatgcGATCGAAGCGACACACGCAACTCTGACGAGCTTCAAAAACTTGACATATTTAAAGCAATGGGACGAAAGACGCATCGATCCGAATCATCCTCAGTTCACTACGAGATCGAAAACATTTCGAGAATCGTTTGATTTATTGGAAACACGTTTAGTACAATTGTTCAAGTATCCGATTGTTTTATCGAAAACCGCATTACCCGAAGTCTACGTAATGGATACATTTTCGTACGACGACGTTGCGTCATCGCCTCGAATAGAGAAAATTCCAACGTATCACAAACGTCGGTAA
Protein Sequence: MTHDKFQCQIENQFVECDIEDYDRTLNLNKQIVTYLLDLKKHITSALAICERKLTTVETNLRNHQTNGDAKIAICNAGIPYFKDRDYFYAPNNEDETFKEAQKELQIRNLPKVCSWSSKERNILFKAVQDEAIVDALDTENIERVQRDCATSKPTTKRRKNTKKQFPPRDTKQMIESFRQKEFNWFKISNIYFKDVHSPLDCCVMWNVFLHPDVNKSCWTRSEDSRLKEAAKRYKYQNWDGIAKELDTNRTAYQCFIRYNTTKKLPKPRNCVWENKEDKRLLKLVEIYKIGDFIPWGELAGWMRNRTKQQVYFRWTYSIAPNLTKGRFSKSEDDILKDAIIKYGTNFRKISAALIPNRSTVQLHDRYQTLTTNQMKNWREWTLAEDSKLIELFECHGSNWSKIAKAFSCKTRTQLRHRHAALQKYSKRGISIFDLNRTRIENGNEERCQVPPANNLDRSVPNDDVDKELIEYFHAECMSKRSDRKRNVSAVADEARHRVTNLYRTLRSLNAKICIPNDANDLRVNDETRQLLCSLRNYVNTKNDGQRYLEILDKCSTNMFGRDYAVVEEGCSRFVPPLPFDTRIKFKKSSESQYIDYNLNRKSIFLAEKPKNFATPDYVISQIGGNEQELQFQKISRLLEFQGSKEFQRNTQNFSTFPIEIFSRRSSSNGNNNIDRSGNALQKIRLQSVLGSESIADSRECATLHANRNSNQSLEQNRNPIALFTTFENVQHIVPVVCNAESTFKEKDAIEATHATLTSFKNLTYLKQWDERRIDPNHPQFTTRSKTFRESFDLLETRLVQLFKYPIVLSKTALPEVYVMDTFSYDDVASSPRIEKIPTYHKRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -