Pmec011104.2
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000004.1:18920726-18935999[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-18 1.9e-14 54.2 0.1 1 45 599 644 599 644 0.96 2 2 2e-18 5.9e-15 55.9 0.0 1 43 1012 1055 1012 1057 0.94
Sequence Information
- Coding Sequence
- ATGCCTTTCTCGCCTGAAATTCAACTGAACACAATGGTGCCAAAGAACTTGGGACGACTTCTTGGGAACCATTTGGTCCgTTCCGGTGGTGTCGCAGGTCTGGAACGGGTAGCGGAGGAGTTGATGGGCCGTAGGAGATGGAAGCAATATCAGGACGCCCTGTACAGCGGTACTCGCAACAGCGAATCATCGACGGCACAGCCTCACCACCGGCTATACCCGACGTTTTCGTCACCTTGCGACCCGGTGTCCGGGAACTCGGATCAAATTGGACCGCGTACGCTTCATCCCGCGTCCTCCTCGTTGCCCACTACGATTacgacgacaacgacgacAGCATCAGCGGCAACGACGACGACCACAGCGGCAACAACGGCGACGACAGCGGGCCTGGTCAAGCAGGACAGCCTGCAAAGGCATTCCCTGCAGAACCACCACCACCTGCAGTCCCCGGTACAAGATCACCACCGTCACTATCAGCAGGAGGAGTCGCGTCGCCTCAGGCCGGACGAGGTGAAGGTCGAGGTCGCCGAAGACGAGTTCGCGAACGGCGTCGCTCGCGAAGGTTCGCCGGCGGACGCGACGAACGCGTCGACGGCGACGACGGTAACGGCCGCGGCGACGACGACCACGACAGGCACGAGTTTCgtcagcagcaacagcagcaccGCGACCGGCACGGTAACGACGAGCGTCGCGACGAACGCGAGCACCGCGGCCACCATGACCACGGGGACGACCACGATCCCGACAACGAGGCGACGACGCAAACGCCGACAGAACGACGGAGATGCCACGGACGACAGAGAGGACGACGAAGAAaacgaggaagaggaggagggaAGGGGGCAGAACGAGGCGGAGAAACGGCTCAAGCTCGATCAGGATGCCGACGGGCCTGTCAGCCCTCTCAGAAGGGAGAAGGACCGGGCTCGGGATTATCCTACTGCCAACGCCACCGACACGGAAGGGACCAAGGTTTGTACCTTTCAGCAGGACAAAGCGTCGCCTACTGTCCCAGGGGAAACAGTTGTTGATTACACGGATAAACTTTTGTTGCAGGATGTTGCGTCGGAGCGGACACCGGTGACGCAGGGTTTGCTGCGAGTGAAGAAAGAGGAAGAGCTGCAAGAGGTACCGAGTTCCGGAGGCGGGCCGACGATCCTGACGACACCGGGGTCGGACGCGGATGGGACCAGGTCAGGGGTGCCGTGTCGGGAGGCTGATGCAGCCGTCAGGACCACGGTAGCGCCGTTCGTCATTACAGGCCGACGCACCAGTCCACCGCCGGAAGACTGGAAGCCGTTGGACAAGTGTTACTTCTGTCTCGATGGCAAGCTAACGCACGATGATCAACCGCCACTCAGTCCGCAGAGCGACAGCAGCAGCAGCTCGCGATCGGCCGAGTCACCGATGTCGGCCCAGGTGGACCCGATGGCGGTGTCCGTGGTCGCCGCGGCCCTCAGCGGCACCTACCCCACCTTGCTGCCTCAGTGGGTCATACCACCGAGGGAGGCGCCTCTCGTCGGAGTGCAGGCTCATCAGGACAGCGCGACGCCGGTTGACCAGCCGCTCGATCTTTCGGCCAAACCCAAAAATTCTCAGGACAACAACATATCTCTATTGGAGCAACAGAAAATACCTCTAAGGATGCCGGCAGGTATCGACCCTAAGAGTATGTACAATTCGTGTTACCGCGCGAAACCGCGTATGACCGGGCCGGTGGCGGCTGTAGCGGCGGCGGCTGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAACTGCAGGCCGCCCTCAGGGATATCCAGAGCGGCAAGCTCGGCACGCGAAGGGCGGCCGTGATCTACGGAATACCGCGTAGCACCCTACGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGATGCGTCCCTGAGTAGCACCCACTCACACCCTCACGAGCCCGGCGCCCCagccaccaccaccaccaccatcaCCACCACCACTAcaactactactactactacaaCACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGATGAGGTGGACGACAAGGAACTGTCCGGAGccgaagaagagaaagaagtcGAGAAAGCGCTGCTGAAGCCGCTGTTGTCCTTGGAAGATCTCGTCATGCTTTCCGCCATGGAGGGCACCGGTGTAGATTCTCTGAGAACTCTGCTTCAACGAGGGCAGAAGATGCTCGCAGCGGGTGCGCCGTTCAAAGCTGGCATGGAGACACAAGATTACCGCATTCCGGAGGTGATGAGAAGGCTGATGAGCGAGGACAAGAGGCTAAACAAAAGCGTAAACGGGGACCAGTCGCAGCCGCACCATCAGCAGCTTCATCACCAGTCCCACTCGATGCACCAGCAAAGCCAAGGCCAGTCGCAGGCGCAACAACAACGGGGCCCCATCACCAACGACGACTTCAACCCGAACATCGAGGAGGAGGCAAGCGACAGCGCCCAAGGCAGAGCGATCCTGAAGATTCCGTCCTACAAGCCCGCGAGCACCCCGGGATGCTCCAGCAAGAACGGCGAGCCAACGTCCGCCGCGTTCGCGCAAGGTTTCGCGGCTGCAGCCGCGGCCGCGGCCAGCGCGTCGAGCCCGGGCCTCCTGGAGCGGGCCAGCCCGGCGTTCTCCGGCACCAGCAGCCCGACCAATTCGCTGGTGGGGAAGACGCCGGCCGTCAACTTCCGGGACGTGATCGCGAAGAGCATCTGCGTCAAATTCCAAGAGGGCCAGCCGGGGTCCGCGGCCGGCATGCCCGGCTGCCAACCCGGCAGCATGGTGCAGTCGCAGCAGGGCATGGTGACTGACCCGAGCCCCTTCAAGAGAGGCCGGTACACGCCGCCCCAGCCAACCTCGCAGCAGTCCCAGTCGCAGTCGAAGCAACAGGCCCAGGACGCGAACAAGGCGAAACCGGCCACCGGCGGCAAAGGGACAAGGCCGAAGCGCGGCAAGTACAGGAACTACGACAGGGACAGTCTGGTCGAGGCTGTGCGCGCGGTTCAGCGCGGCGAAATGAGCGTACATCGTGCAGGCAGCTATTACGGAGTACCGCACTCCACCCTCGAGTACAAAGTTAAGGAACGGCACCTCATGAGGCCGAGGAAGAGGGACCAGAAGCAGACGGACGACAAGACGAAAGAGACGGCGGCGAGCGCCGCGTCGGTGGCTGCCGCGAACATGCGACCAGGCACGACGGACAAGAAGCCGCAACTGAAGCCGCAGAAACCGTTTACACCCCCGAGCGGTATACCAGGTCCGAACGGAATCAAGATGCCCCCGTTCATGGAGGGCATGCCCCACCTGCCGTTTCCGCCGTTCAACTTCTGGAACCCGACGCCATTCATGCCGTCGCCGTTCATGGCGGGAGCGCCTAACGTGCCGGCGATCCTGCCGGAGCAGTACTTTGCGACCAGCCGGATGCGCGGGCTGCAGGAGCAGCAGAGGAACGCGATGgtgcaacagcaacagcagcacCAGCCACGGGACCGGGACGGGATCGGCGtggcggcgacgacgacggaaTCGCCCGGCACCTCGAGCTCCCGCAGCACGCCGTTGACGAAGGCGTCGCGGGACGTGGCGGAGAACCTGTACGACGGTTCGGGGGCGAACGGTAGCTTCCTGGACAATCTGATCAGGTCGAGCTTAGAGGCAGGGATACCAAGGGACCAGAGGGCGATGACGGAGGCGAGGAACCAACAGCAGTCCTCGTCGCAGCAACAGCTTCCGGAATCGATGAGGGGCAAAGCGTTGATCGACCAACTGTGCAGAAACTCGAGGCGGACGCCGGTGCCGCGGCTCGCACAAGACAGCAGCGAGGACGAGAGCTACCGGGGACCGTCGGCCGCGGGGAGGCCAATCCCGGAGAGGCCGGAACGCGTGCCCACCGTCGATCTCAGCCCGTCGCCGTCGGAGCGGGGCCGCGCGGACGACGGCAGCGACCGTCTCACTTCCCCGCCAACGCCGCTCTCGATCTCGAGGACTGGCAGCAGGGACGAGGACAGTGTTCGCGACTCGAGGATCGACCGTAGCAGTAGGGAGCGCGAGGTGCATAACGGTGGACCGGACGACCGCGATCGAAAGACTCTGACCATTCAGCAGCcgcaacaacagcagcagctGAATAACTACCCGGACTTACTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGActcagcagcagcaacagccgCAGCAGCAAccgcagcagcagcagcagcagcaacagcaacaaaaGGATTACGCTGCGGTAGGCGGGCTGGTTGTGCAACTACAGCGGGGCTACAACAGTGGGAACAACAGGTCCGGTGAGCAGACCAACAGTCAACAATCGGCAGAGCAACGCGGCCCCGTTATCAGTATGGAAGACTCCGTTGAGCAGTAG
- Protein Sequence
- MPFSPEIQLNTMVPKNLGRLLGNHLVRSGGVAGLERVAEELMGRRRWKQYQDALYSGTRNSESSTAQPHHRLYPTFSSPCDPVSGNSDQIGPRTLHPASSSLPTTITTTTTTASAATTTTTAATTATTAGLVKQDSLQRHSLQNHHHLQSPVQDHHRHYQQEESRRLRPDEVKVEVAEDEFANGVAREGSPADATNASTATTVTAAATTTTTGTSFVSSNSSTATGTVTTSVATNASTAATMTTGTTTIPTTRRRRKRRQNDGDATDDREDDEENEEEEEGRGQNEAEKRLKLDQDADGPVSPLRREKDRARDYPTANATDTEGTKVCTFQQDKASPTVPGETVVDYTDKLLLQDVASERTPVTQGLLRVKKEEELQEVPSSGGGPTILTTPGSDADGTRSGVPCREADAAVRTTVAPFVITGRRTSPPPEDWKPLDKCYFCLDGKLTHDDQPPLSPQSDSSSSSRSAESPMSAQVDPMAVSVVAAALSGTYPTLLPQWVIPPREAPLVGVQAHQDSATPVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSMYNSCYRAKPRMTGPVAAVAAAAVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTTTTITTTTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVMLSAMEGTGVDSLRTLLQRGQKMLAAGAPFKAGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPHHQQLHHQSHSMHQQSQGQSQAQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAAAAAASASSPGLLERASPAFSGTSSPTNSLVGKTPAVNFRDVIAKSICVKFQEGQPGSAAGMPGCQPGSMVQSQQGMVTDPSPFKRGRYTPPQPTSQQSQSQSKQQAQDANKAKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQTDDKTKETAASAASVAAANMRPGTTDKKPQLKPQKPFTPPSGIPGPNGIKMPPFMEGMPHLPFPPFNFWNPTPFMPSPFMAGAPNVPAILPEQYFATSRMRGLQEQQRNAMVQQQQQHQPRDRDGIGVAATTTESPGTSSSRSTPLTKASRDVAENLYDGSGANGSFLDNLIRSSLEAGIPRDQRAMTEARNQQQSSSQQQLPESMRGKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSAAGRPIPERPERVPTVDLSPSPSERGRADDGSDRLTSPPTPLSISRTGSRDEDSVRDSRIDRSSREREVHNGGPDDRDRKTLTIQQPQQQQQLNNYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQQQQPQQQPQQQQQQQQQQKDYAAVGGLVVQLQRGYNSGNNRSGEQTNSQQSAEQRGPVISMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00215624;
- 90% Identity
- -
- 80% Identity
- -