Pmec025929.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- Xbp1
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000011.1:10100607-10102351[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-14 9.5e-11 42.7 15.4 2 60 84 142 84 147 0.93 2 2 1.8 3.4e+03 -0.7 0.2 35 49 206 220 203 235 0.75
Sequence Information
- Coding Sequence
- ATGAGCGTATTGAAGAGTGTAATCATCACGCTGCCTAAGGGCCTCGCGAAGGCTCCGGCTGTTATTTCGGGCAACGAGTTCTCCAAATCGATGCCCAAACTGAATTTCACCACTTCTATATTAGCCGACAAGCCGAAGATGGACCCGAAGAAGATAACGAAGCACGAAGAGATACAGGACGAAGGCGTGTTGTTCAAGACGGACGTTTGTGTTCGTGGAAAGAAACGACGCCTGGACCATTTGACGTGGGAAGAGAAGCTGCAACGAAAGAAACTGAAAAATAGGGTAGCAGCGCAAACCTCTAGGGATCGTAAAAAGGCCAAACTCGACGAATTAGAAGATACAGTTAGGACATTGAGGGAGCAAAATGAATTATTGTCGCAGGAATGCACCATGCTCAAGTCGCAAAATGAATTGTTGATCACGGAGACAAAGAGATTAAGGAAGGAGAAAGACACGAAGAATGGCGGAGAATCAATCTGCTCAATGTGGTGGAGCAACGCAGCTGGCACCGCCCCTGACGCTAACCCCAGAAGCAGCAATTCTTCTGAAGATACTGACCATTTACCTCCTCTTGAAGAATTATTTGGTGACCTCCAAGGAGACGATTACATCGAACGACTTGAAGAACTTGCAGAAAGCCTTCTGCGAGAGGTTACCGCAGAAGTGGAAGCAAATCCTCATAGAACAAATGAACAAGTGTCAGTCAAGGAAAATACCAATGAGAAACGTGACCATTCGAAAAGAGTGGTGGGGCAGGCATCAAAAGATGTGGAAGCCGGTAGAGCCTCTAGAAGCATGAGCACCTACCAATCTTGGCATCCTGTTACCAGCACAGTTGCTACACCTTCTACCACAACTACGGTTACACCGGTGTCAATAAAAACGGAAGTCGAAGTAAAACAAGAGATCGATACGCACGATTTGGACACTGTTTACGGCACTTACGACGAAACCACCAATTCTATAACGATTATTTATCCAGGAGACGAGAACAGCGTGGGTATTCAAGAATGTGTTCAAGAGGTGAGCACCGACGGCGTCTGCTCGACCGAGGACTCGTCGTATCTCACGcccaattattattattcgaatcaGTTATCACCGTCGTACACGTGCACCGATTCGATGTCGCCGTCGAGTATACATTCCGAGGATATGGATAACAATTTCGCACAGACGAAAGTAGATTCGAGCGCGTCCGACTGCGGTTACGAGTCGCACGGTTCACCGACGCCCGACGTTCGTAACGAGAAAAACAAGAGCATAGCCCTTTCGGATCTTTGGCACGAAAGcttttcagaattatttcCGACGTTAGCATGA
- Protein Sequence
- MSVLKSVIITLPKGLAKAPAVISGNEFSKSMPKLNFTTSILADKPKMDPKKITKHEEIQDEGVLFKTDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRTLREQNELLSQECTMLKSQNELLITETKRLRKEKDTKNGGESICSMWWSNAAGTAPDANPRSSNSSEDTDHLPPLEELFGDLQGDDYIERLEELAESLLREVTAEVEANPHRTNEQVSVKENTNEKRDHSKRVVGQASKDVEAGRASRSMSTYQSWHPVTSTVATPSTTTTVTPVSIKTEVEVKQEIDTHDLDTVYGTYDETTNSITIIYPGDENSVGIQECVQEVSTDGVCSTEDSSYLTPNYYYSNQLSPSYTCTDSMSPSSIHSEDMDNNFAQTKVDSSASDCGYESHGSPTPDVRNEKNKSIALSDLWHESFSELFPTLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00086857;
- 90% Identity
- -
- 80% Identity
- -