Pfun008581.1
Basic Information
- Insect
- Penthetria funebris
- Gene Symbol
- nfxl1
- Assembly
- GCA_027564355.1
- Location
- JANSTX010002230.1:18037-27477[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.9 7.5e+03 -3.0 1.4 14 19 210 215 210 215 0.86 2 15 0.4 3.4e+03 -1.9 0.4 4 10 246 252 246 252 0.93 3 15 7.3e-08 0.00061 19.7 17.3 1 19 260 277 260 277 0.99 4 15 0.0022 19 5.3 10.6 1 19 313 332 313 332 0.93 5 15 1.1e-07 0.00093 19.1 13.5 1 19 367 385 367 385 0.99 6 15 0.91 7.6e+03 -3.0 1.7 13 18 408 414 408 416 0.74 7 15 5.7e-09 4.7e-05 23.2 11.9 1 18 420 437 420 438 0.97 8 15 0.0018 15 5.6 16.6 3 18 474 489 472 490 0.91 9 15 2.6e-07 0.0022 17.9 17.9 1 19 499 517 499 517 0.97 10 15 1.9 1.6e+04 -4.0 8.1 9 18 563 572 556 573 0.88 11 15 0.15 1.3e+03 -0.6 5.8 3 12 586 595 585 595 0.88 12 15 0.011 93 3.1 7.7 1 12 666 677 660 677 0.91 13 15 0.012 97 3.0 15.5 1 19 705 722 705 722 0.97 14 15 1.4e-06 0.012 15.5 12.2 1 18 773 792 773 793 0.89 15 15 0.7 5.8e+03 -2.6 0.6 6 10 822 826 821 826 0.92
Sequence Information
- Coding Sequence
- ATGTCAAATAATATTCAGAATGTATGGACGGGTGGCACTAGTTCATCAACAAATCACACAATCAATACACATAGATCAATACCAAATCAGAAAAATCGTAATGTTGCAGTTGCACAAGATAAAAAAAAATCAAATGATACGACGATGATAATAAATCAACAACAACAGAAACGAAATACAAAAAATAATGGCAATGAAGTGATGAAACAAAAATCAACAGATGAAAAATTTCGTGAAGTACAAATTAAACATATTGAAGCTGCTAAGAAACATGTTAAGTCTTATGATAGTAGCTCGGATGAGGATCAGTTAGAAGATGATAAATTACTTGATACCGTTTTCAAAAACTACACAGATGATAGATCAAAATTACAAAAAACGCAACAATTTCTAGAGAATATTTTTCAATCTGGTGCCGCAACCTGTCTTATATGTATTGCTACGGTTAAAAGGATTGATTCGATATGGTCTTGTGAAAATTGTTACAGTTTTTTTCATTTGCCATGTATTCAACGTTGGGCAAATGATAGCATATCACAAAAACAATTACATGATGCAAATAATGAAGCAGGATATTATACAAATCAGGGTGTTTATATAAAAAATGCGAAAATTTCTCTCAAATGGGATTGTCCAAAATGTAGAAAAGATTATTTACCAACTGAGATACCTCGTTATTATAATTGTTTTTGTAAAAATGAAATAAATCCACCAAATCATCCATGGCTTATACCACATTCATGTGGTGAAATGTGTCGAAAACTATTATTACCTGAATGTGGTCATAAATGTGTTTTACTTTGTCATCCCGGACCATGTCCACCATGTCCACAAATGATACAAACATCTTGTCAATGTGGTCAATCACAAGCACGTACAATACGATGTTCACAAAAATATTGGAACTGTTTAAATAAATGTAAATTGAAATTAAAATGTAATATTCATATATGCAATTTACCATGTCACAGTGAAAATGAATGTCCACCGTGTAGTAAAAAGAGTAAACAAAAATGTATTTGTGGCAGTGAAATAAAGGAAAGAAATTGTTCTGATTTAATTTGGCAATGTGATAAGATTTGCAATAAAGTTCGATTTTGTGGTATACATAAATGTAATGAGAAATGTCATCCTGATGCTTGTAGTCCATGTCCATTAGGATTACCAAGAACATGTCCTTGTGGTAAACAGAAAACTCAAGCGCCATGTTCAGAAGAAATTGGGCCTTGTGGTGATACGTGTCAGAAAGTATTAGCTTGTGGATTGCACACGTGTGCCGAACGATGTCATAAGGGTGATTGTGGGCAGTGTTTGGAGAAAATAGAGAAACAATGCCGATGTGGATCAAGTATGAAAGAACAACCCTGTTCAAAAGTATTTCTATGTACAATTAAATGTAAACAAATGCGTGACTGTAAGAAACATCCATGTAACATTAAGTGTTGTGATGGTCAATGTCCACCATGTAATAAAATATGTGGTAAAACTTTACAATGTGGTAAACATAAATGTACATCATGTTGTCATTTAGGACCGTGTTATCCATGCACATTAAAAGTTCCACTAAAATGCCGTTGCAAAGGAACGTCAATAAATGTTCCATGTGGACGTGAAAGAAAAACCAAACCACCAAAATGTAATTTACCTTGCAGAATACAGTCAAAATGTCATCATGAAAATCCACATCGTTGTCATATTGATGATTGTCCAACATGTGTTCAATTGTGTTTATTAAAAAATGATATAACAAATTGTGAACATCTATGTGAAGCTAGATGTCATGATGCGGTTAAGGTTTCTATTGTTGATATTAATTTTAAACCAGTTGGTCCATGGGATAGACAACCGGAAAAGTTTGAAATACGACAATTAAAACATCCTCCGTGCGAAACAAAAGTATTAGTTACTTGCATTGGTGGCCACGAAAGTGTTATGTATCCATGTTGGAATTCAAAACCAATGTCTTGTGGTCGTATATGTGGCAGAAAATTAAATTGTACAAACCATGTGTGTCAACAACAATGTCATGATGTTGTTAATTTAACTTCGGATAAACAAGATGCAAATTGTATAGGATGTGAAGAAGGTTGTGCTATTAAAAGACCTGATGGTTGTGGTCATCCATGTACTAAACAATGTCATTCACCGCCATGTGATATTTGTCAAATGAATGTAAAATCAGGTTGTCATTGTGCATTAACACAAGTGTATTATAAATGTGGTGAATTTAATCGATATATATCAGAGTCAAAGGATTTAATTGAAATTCGAGAGAAATTATTGAGTTGTGGTAATCGCTGTATAAAAGATTATAAATGTGGTCATCGTTGTATTGGCATTTGTCACTCGGGACCATGTCCAAATTCAGAATCatgtgaaaagaaaACAAAAATATATTGTAAATGTAGAACACTTAAAACTGATGGTACATGTAAGAAAATACGTACTGGTTTTATTTTACATTGTAATGAAGTATGTGATGGTAAACGGGAAACAGTGCAGAGGATTGCTGAAGAAAGTGAAAGAAAACGAAAAGAATGCGAAGATGAAAAGCAGAGACAAGAATTAGAAGAATTTGAAAAGAAATTTGGCAAGAAGAAATTTAAGGAACGTAAAAAGAATATTGTTGAAAAACAGGAAGATCAATATTTAACAAAAATTATAATTGGAATTAGTGTACTGATATTAGGTTAA
- Protein Sequence
- MSNNIQNVWTGGTSSSTNHTINTHRSIPNQKNRNVAVAQDKKKSNDTTMIINQQQQKRNTKNNGNEVMKQKSTDEKFREVQIKHIEAAKKHVKSYDSSSDEDQLEDDKLLDTVFKNYTDDRSKLQKTQQFLENIFQSGAATCLICIATVKRIDSIWSCENCYSFFHLPCIQRWANDSISQKQLHDANNEAGYYTNQGVYIKNAKISLKWDCPKCRKDYLPTEIPRYYNCFCKNEINPPNHPWLIPHSCGEMCRKLLLPECGHKCVLLCHPGPCPPCPQMIQTSCQCGQSQARTIRCSQKYWNCLNKCKLKLKCNIHICNLPCHSENECPPCSKKSKQKCICGSEIKERNCSDLIWQCDKICNKVRFCGIHKCNEKCHPDACSPCPLGLPRTCPCGKQKTQAPCSEEIGPCGDTCQKVLACGLHTCAERCHKGDCGQCLEKIEKQCRCGSSMKEQPCSKVFLCTIKCKQMRDCKKHPCNIKCCDGQCPPCNKICGKTLQCGKHKCTSCCHLGPCYPCTLKVPLKCRCKGTSINVPCGRERKTKPPKCNLPCRIQSKCHHENPHRCHIDDCPTCVQLCLLKNDITNCEHLCEARCHDAVKVSIVDINFKPVGPWDRQPEKFEIRQLKHPPCETKVLVTCIGGHESVMYPCWNSKPMSCGRICGRKLNCTNHVCQQQCHDVVNLTSDKQDANCIGCEEGCAIKRPDGCGHPCTKQCHSPPCDICQMNVKSGCHCALTQVYYKCGEFNRYISESKDLIEIREKLLSCGNRCIKDYKCGHRCIGICHSGPCPNSESCEKKTKIYCKCRTLKTDGTCKKIRTGFILHCNEVCDGKRETVQRIAEESERKRKECEDEKQRQELEEFEKKFGKKKFKERKKNIVEKQEDQYLTKIIIGISVLILG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -