Basic Information

Gene Symbol
zfh2
Assembly
GCA_027564355.1
Location
JANSTX010000069.1:1-7938[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.56 35 5.0 4.6 2 23 79 101 78 101 0.96
2 9 0.004 0.25 11.8 0.0 3 23 340 361 338 361 0.95
3 9 0.03 1.9 9.0 0.2 3 21 451 469 449 473 0.89
4 9 0.0015 0.096 13.1 2.0 1 23 519 541 519 541 0.96
5 9 0.00053 0.033 14.5 2.4 2 23 548 570 547 570 0.94
6 9 0.025 1.6 9.3 4.5 1 23 778 802 778 802 0.91
7 9 0.01 0.64 10.5 0.6 1 22 824 845 824 848 0.89
8 9 0.0046 0.29 11.6 0.1 1 23 1007 1031 1007 1031 0.93
9 9 0.89 55 4.4 2.7 1 19 1276 1294 1276 1299 0.92

Sequence Information

Coding Sequence
ATGCAACTTGAAAATCAAATtactggttatggcagtattggaggtggtggtagtaatactagtagtagtggcggtggttgcggtagtacagctgcctctgctggtggtgttggcggaattggtggtggtattattggtagtggtaatattggtgctggtatgatggtacatcctggcacaacaattaataataataataataataataataataatacaccaacaacaatattaaAATGTAATCATTGTGATTATTTTACTGAAACAAAACATGAAATTGATCATCATTTAAATGTAATTCATCCAAATAGTTGCGAAAATGATTTCATTGTTATTCCAACAAATCCATTAAGTATTATGGCATTTCAAGCTGCTGCTGCTGCAGCAGCGGCCGCGGCCGCCGCAGCTACACAAGGTTTATCAACATCATCATCATTATCAATGCACCAAGGTCATCATGGACATAAAATTAAATTCACAAATGATGACATTAAATTGGAAAAAATGGATGCCGACGATGATGCCGAATATTTTTcgagcagtggtactattgaccatcaccatcaacacttgcatcatcaacaacatcagcaacaacaacaattactccatcaccatcaacaacaacaacaacagcaacaacaacagcaacaacaacaacaacaaaaacaccaaagtcatcaactgcaacagcagcaacaacagcaacaacaacaacatcaacaacagcatcgccgccattcatttggcggtgctggtgttagtaatgatgttggtgaaattgatgatagtgaaaatttatcacaatcattacgcacaatatccagttcctcaacaaacattaatagaaccactgagacaatgataaatgatgataatgatattgataatgatgatgacattatggatggtattgatgatgaaagtgaagatgatgatattgacgatgatgatgatgatgataatgatgatatgattgaggacgatgaagacgatgacggtttaattggtataatatgtccattgtgtcaagatagttttcctgataaaaaatcattagaaaaacatgttatgatagtgcatagtgttaatagcgatggattggcaagactcttgaatttagttgatgctagtcattggttaaatagtaaaaaaagtccagacagtaatgttaaaaacaataataataataatagtaataataataataataataataataataatattagtaacagttccaattgtggagaaaatacacttcaaatgtcttcatcaacaaataatacatcatcaACTGGTGCCACAAGTTGCATGAAAAACTATGACCACGATGGTACTGACATCGATTGTCAAATTTGTGGTAATAATTTCAAATCAATGTCAGATTTATTGCAACATTCAAATGAATTACAACATTTTACAATAATAAATGATTTATACAAATGCATCTTAAAAACATGTTCGCAAACATTTTTAAACGTTACCAATATGACAACCCATTTTAAGGATAGCCATATGAATATTGTCATATCTGAGCGTCATGTTTACAAATATCGTTGTAAATTATGTTCATTGGCATTTAAAACACAAGAGAAATTAAATACACATTCATTGTATCATACAATGCGTGATGCAACCAAATGCAATTTATGTAATCGTAATTTTCgcagcacaacatcattaaaaaaacatatcgaacaaatgcacaataatgtttcaatatcaacagcagctacaacaataacaacaacaacaacatcaacaacaacaacaaccacaacaacaacaacaacaacaacatccacaacagccacattatcttcatccacaacatcaccattaatcatgacaacacaatcaataacaccaacaactttgtcagtatcatcagcatcttcaccgccaccattaaatacatctatggaatcaccagatagtgctaattatgataataaaaatgatttagatgattataataatatgatgatgatgatgacgacaacaacaacaacaacaacaacaacaacaacaccaacagatggtgtcaccgctaatattttgccaaatataaaacaagaagatttagcacatgaacaaaatgatattagtgtaggtggtattgatggtcgaaatgctaatactattttaaatgatgaacaatactttaataataataataataataataataataatacgtcaggtaatattgatggtaatTCGTCATCATGTTCAATGTTACCAATGCCAACTGAAACAACTGAAATTGATGAATATTTAAATTCACAACAAATGGCCGAAGATAATTACAATGATTTAAATCGAAAATTTAAATGTCATAAATGTAAAATGGCATTCACAATACAATACTTTTTAATACAACATTATAAATCGAATACACATCGGCGAAATGAGAAAATTAACAATAATTATCCATTAGAAAAGTATTTGGATCCAAATCGGCCATTTAAATGTGAAATATGTCGTGAAAGTTTTACACAAAAGAATATTTTATTGGTTCATTACAATAGTGTTTCACATTTACACAAATTGAAGAAACAACAAAATGAGAATACCAATTTGGCAacagttgcatcgtcgacatcaacaataatgggaacatcggtaacgacaacatcaattactggcaacacaataatatcaacaccagccacaagtcccacaaataatgaaTTTGATCGGAAAAGTATTGAATATGATCGACGTAGTTTAGATGTTGATCGTAAAAGTATTGATTTTGATCGTAAAAGTATTGATTTTGATCGTAAAagtattgatttggattatgaaaatgaattacaacaattgcaacaacagcaattaatacaacaacaatttcaacaacagcaacagcaacaacatcatcaacaccaacaacaacaacaacaacaacaacaacaacaacagcaacaacaattgcaacagcaacaccaacaattaatgcaaaaacgcaaattgagtccagaaaatgaTTATGATAGTCCAAAGAAACGTTTCAAATGTGACATATGCAAAGTTGCTTATGCACAAGGTAGCACTTTGGACATACATATGCGTAGTGTATTACATCAAACACGCGCCTGTCGCCTTCAAGAACAACAACTAAGTTCCTCATCATCGTCATCTACAACACCAACAATAACATCATCTGTGCTTCATTCACAACAATCACAACAACAATTATCACCACATGGTTTATCACCAACAAATTTAATGACACAATCACGTCAATTTGATCAACAACAGCATTCAATCAATAGTATTAGTCCGACACCATCAAATTTAAGTATTAATCAAGAAATGCCAATGACTGAAAATTCACCAAAAATTAATAACCAAATTTATAAAACACTTTTAGAAAATTTTGGCTTTGATATTGTAAAACAGTTtaatgaaatcaataagattgatcaacaacaacaaaatcgtattaatagtaataataataataataataataataataatagtaataacaatgcaaacaacaatattaatatcaattccaataataatagccaaaacaacaataataataataataataatgataaaaacgaaaatagtaaatttggcaacagtggcaacagttgcggtggtgtgtcaataacaccaaccacaacaaccccaataacaaccgaaacatcagcagcaacatcaacactaacattatcaacaacaccattttcacttgcatcaacaaaaccgtcatgcacaacattaccattttcatcaacatcaccaatgaccccatcacaaacaggcacaataactttattgagtcaaaattccgatgaaaaatattattgtcGTCAATGTAAGAAAATTTTTTCCAGTATATTCGTACTGAAAACACATTGTGAAGAAATTCACAATGAGAAAATACCATTGGAATTTTTGGAGAAATTTGCCGAAAAATTTAAGAATTATTATCTTGATACAACTGCAACAACATCAAATCCAAGTGGTAATACAAGTGGCGATGGTCTACTAACAACAAAACAATGTACATCATCATATTCAATGTCTACAACGTCTGCAATAACAAGTGCAGTACAACAATTAACAACGCCAACAACATCACCAACAACAATATTACAAATGGCCGAAATGAGTCCATCCAGTGGCAACACTATAAATAATTCGGCAAATAATTCAACAAAATTGTCAATGTCATCGATAATGAGTGAAAATAATGACAATGAAATATTGGATTTTTCATCAAAAAAAGATTTAAAAGAAAATGTAAGAAATGAAAACCAAACATTTTTAAATTCACCAACATTTGCCGGTAATTTGGGTAATAATAATGTACCAGATTTAGCACAAAAATTAAATATCGATCCGCAAATATTGGCACAAAAAATGATGGAACAAAATTTCACCCAAAATTCCCTAAATTTTCCCCAAACATTACAGAATTTACAAAATTTACCGAATATTGCGGCTGCGGCCGCAGCAGCCGCTGCTGCCGCTAACGGTGGTGGTAATAATAATGGAGGTGGCGCTGCAAATGGCGGTAATAATACGGGAAATGGAAATATACCATTAAATACAATTGATATGTTAAATTTAATGCAATTTCATCATTTAATGTCATTGAATTTTATGAATTTAGCACCGCCATTAATTTTTGGTGCTACtggaaccggtggtggtggtggtggtggtggtggtggtagtgcctcatcgggtacaattggtaatagtggcattggtggcggtattagtggtaataataatgtcaataataataatattggtaatattggacaatcatcaaatgaattaaatttatctggtggagcgcaacaagtacaaatgttacagcaacaagcagctgctgcggcagcagcgcaagctgcagctgtacaacaGGCGTCAAATAATCAAAAACGAGCTAGAACTCGCATCACAGATGAACAACTGAAAATATTACGTGCCCATTTTGACATAAACAATTCGCCGAGCGAAGAGAGTATTATGGAAATGTCAAAAAAGGCCAATTTGCCGATGAAGGTTGTTAAACATTGGTTTCGAAATACATTATTTAAAGAACGACAACGTAATAAAGATTCACCCTATAATTTCAATAATCCACCATCAACAACATTGAATCTTGAAGAATATGAACGTACTGGTCAAACAAAAGTTACGTCACTTAATGATCCGATTGATGTAAGTgcaactgttgtaacaaatcaacaacaacagcaacaattacaacaaaatcaacaattaccacaaacaactcagcaaatgttacaggcaatacaactacaacaacaacaacaacaacaacagcagcaacaacaacaacagcaacaacaacaacagcagcaacaacaacaacaacaacaacaacaacaacagcagcaacaacagcaacaacaacaacaacagcagcaacagcaacaacatcaacaacagcagcaacaacagcaaatgttattgcaacaacaacaacaacaattacaacaattgcaacaacaacaacaagataatcgaccactttcgcaaccatcaagtattgccagcagtagtgatcatcaacatcgtcatcaagacaacattattCAGGTAAAATCTGAACCAATTGGTGGTGATGATGGAATGTTGATGATGGACGGCATCGTAAATTGTAGTAATAATATAAATAATTGTTTAAAAAGTGAACAAATGTTAATTGATCATGATCATAATAGTATGCATTCGCATCATCAAAATATGTATTATAATAATAATTTCGAAACAAAATCGGAAAGTGGTAGTTCGGAAATTTTATCTAGACCACAAACACCAAATTGTAGTTCCTATAATAATATCAATGATATTATCAATCAACAAATTGAAAGTATACCAATAAATAATATAACAAATATTGGCAGCCTAAATAGTATGGGGCCACCGAAAAAATTTCAATTAAATAAAATATTTGATAAAAGTTTCGAATCGAATTCAAATTCATCGAATTCATCGACATCTAGTGGTAAACGGGCAAATCGTACCCGTTTCACTGACTACCAAATAAAAGTATTGCAAGAATTTTTCGAAAATAATTCTTATCCAAAAGATAGTGATTTAGAATATTTGAGTAAACTTTTATTGTTATCGCCACGTGTTATTGTCGTATGGTTTCAG
Protein Sequence
MQLENQITGYGSIGGGGSNTSSSGGGCGSTAASAGGVGGIGGGIIGSGNIGAGMMVHPGTTINNNNNNNNNNTPTTILKCNHCDYFTETKHEIDHHLNVIHPNSCENDFIVIPTNPLSIMAFQAAAAAAAAAAAAATQGLSTSSSLSMHQGHHGHKIKFTNDDIKLEKMDADDDAEYFSSSGTIDHHHQHLHHQQHQQQQQLLHHHQQQQQQQQQQQQQQQQKHQSHQLQQQQQQQQQQHQQQHRRHSFGGAGVSNDVGEIDDSENLSQSLRTISSSSTNINRTTETMINDDNDIDNDDDIMDGIDDESEDDDIDDDDDDDNDDMIEDDEDDDGLIGIICPLCQDSFPDKKSLEKHVMIVHSVNSDGLARLLNLVDASHWLNSKKSPDSNVKNNNNNNSNNNNNNNNNNISNSSNCGENTLQMSSSTNNTSSTGATSCMKNYDHDGTDIDCQICGNNFKSMSDLLQHSNELQHFTIINDLYKCILKTCSQTFLNVTNMTTHFKDSHMNIVISERHVYKYRCKLCSLAFKTQEKLNTHSLYHTMRDATKCNLCNRNFRSTTSLKKHIEQMHNNVSISTAATTITTTTTSTTTTTTTTTTTTTSTTATLSSSTTSPLIMTTQSITPTTLSVSSASSPPPLNTSMESPDSANYDNKNDLDDYNNMMMMMTTTTTTTTTTTTPTDGVTANILPNIKQEDLAHEQNDISVGGIDGRNANTILNDEQYFNNNNNNNNNNTSGNIDGNSSSCSMLPMPTETTEIDEYLNSQQMAEDNYNDLNRKFKCHKCKMAFTIQYFLIQHYKSNTHRRNEKINNNYPLEKYLDPNRPFKCEICRESFTQKNILLVHYNSVSHLHKLKKQQNENTNLATVASSTSTIMGTSVTTTSITGNTIISTPATSPTNNEFDRKSIEYDRRSLDVDRKSIDFDRKSIDFDRKSIDLDYENELQQLQQQQLIQQQFQQQQQQQHHQHQQQQQQQQQQQQQQQLQQQHQQLMQKRKLSPENDYDSPKKRFKCDICKVAYAQGSTLDIHMRSVLHQTRACRLQEQQLSSSSSSSTTPTITSSVLHSQQSQQQLSPHGLSPTNLMTQSRQFDQQQHSINSISPTPSNLSINQEMPMTENSPKINNQIYKTLLENFGFDIVKQFNEINKIDQQQQNRINSNNNNNNNNNNSNNNANNNININSNNNSQNNNNNNNNNDKNENSKFGNSGNSCGGVSITPTTTTPITTETSAATSTLTLSTTPFSLASTKPSCTTLPFSSTSPMTPSQTGTITLLSQNSDEKYYCRQCKKIFSSIFVLKTHCEEIHNEKIPLEFLEKFAEKFKNYYLDTTATTSNPSGNTSGDGLLTTKQCTSSYSMSTTSAITSAVQQLTTPTTSPTTILQMAEMSPSSGNTINNSANNSTKLSMSSIMSENNDNEILDFSSKKDLKENVRNENQTFLNSPTFAGNLGNNNVPDLAQKLNIDPQILAQKMMEQNFTQNSLNFPQTLQNLQNLPNIAAAAAAAAAAANGGGNNNGGGAANGGNNTGNGNIPLNTIDMLNLMQFHHLMSLNFMNLAPPLIFGATGTGGGGGGGGGGSASSGTIGNSGIGGGISGNNNVNNNNIGNIGQSSNELNLSGGAQQVQMLQQQAAAAAAAQAAAVQQASNNQKRARTRITDEQLKILRAHFDINNSPSEESIMEMSKKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQTKVTSLNDPIDVSATVVTNQQQQQQLQQNQQLPQTTQQMLQAIQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQMLLQQQQQQLQQLQQQQQDNRPLSQPSSIASSSDHQHRHQDNIIQVKSEPIGGDDGMLMMDGIVNCSNNINNCLKSEQMLIDHDHNSMHSHHQNMYYNNNFETKSESGSSEILSRPQTPNCSSYNNINDIINQQIESIPINNITNIGSLNSMGPPKKFQLNKIFDKSFESNSNSSNSSTSSGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01168274;
90% Identity
iTF_01168274;
80% Identity
iTF_01168274;