Basic Information

Insect: Penthetria funebris
Gene Symbol: -
Assembly: GCA_027564355.1
Location: JANSTX010005559.1:8828-11496[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0023 0.14 12.5 0.3 3 23 169 190 168 191 0.93

2 14 7.6 4.7e+02 1.5 0.7 3 23 204 226 203 226 0.87

3 14 4.9 3e+02 2.1 2.3 1 23 236 259 236 259 0.92

4 14 0.026 1.6 9.2 8.9 1 23 263 285 263 285 0.98

5 14 0.0011 0.071 13.5 0.3 3 23 291 312 290 312 0.95

6 14 0.26 16 6.1 0.9 2 23 353 374 352 374 0.95

7 14 0.065 4.1 8.0 4.2 1 23 382 405 382 405 0.89

8 14 0.002 0.12 12.7 1.6 1 23 409 431 409 431 0.98

9 14 1.8 1.1e+02 3.4 0.0 3 19 510 526 509 529 0.90

10 14 0.00021 0.013 15.8 4.4 1 23 585 608 585 608 0.96

11 14 9.9e-06 0.00062 20.0 2.4 1 23 612 634 612 634 0.98

12 14 0.0016 0.1 13.0 3.4 1 23 651 674 651 674 0.93

13 14 1.6e-07 9.7e-06 25.7 3.3 2 23 679 701 678 701 0.97

14 14 0.017 1.1 9.8 1.7 1 23 707 729 707 729 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0023	0.14	12.5	0.3	3	23	169	190	168	191	0.93
2	14	7.6	4.7e+02	1.5	0.7	3	23	204	226	203	226	0.87
3	14	4.9	3e+02	2.1	2.3	1	23	236	259	236	259	0.92
4	14	0.026	1.6	9.2	8.9	1	23	263	285	263	285	0.98
5	14	0.0011	0.071	13.5	0.3	3	23	291	312	290	312	0.95
6	14	0.26	16	6.1	0.9	2	23	353	374	352	374	0.95
7	14	0.065	4.1	8.0	4.2	1	23	382	405	382	405	0.89
8	14	0.002	0.12	12.7	1.6	1	23	409	431	409	431	0.98
9	14	1.8	1.1e+02	3.4	0.0	3	19	510	526	509	529	0.90
10	14	0.00021	0.013	15.8	4.4	1	23	585	608	585	608	0.96
11	14	9.9e-06	0.00062	20.0	2.4	1	23	612	634	612	634	0.98
12	14	0.0016	0.1	13.0	3.4	1	23	651	674	651	674	0.93
13	14	1.6e-07	9.7e-06	25.7	3.3	2	23	679	701	678	701	0.97
14	14	0.017	1.1	9.8	1.7	1	23	707	729	707	729	0.97

Sequence Information

Coding Sequence: ATGGACCATTTAACGAATGTTTGGTATTTAACTGATTATTCACTAATTAAAATTGAGTCAATTGAAGAAGCATATGAAATTATTAAAAAGTTACAACAGAAATATTTAGAAGAAATTGCAGAGAAAAAAGCATTGGAACAAATAATATCGGAATTAAATGAAAAGTTAAGAATTTTGGAAAATAATTTTAATCGTAAAAATAGCACATCTTCTGATTTCAAATTGAATACCAGTGGGGATTATGATGATCATGATAATGAAGATAATAAATATGGCAATAGCGTATTGTTACAAGACAAATTTACGTCCGATGTGAACAATAGTATAGATATTTATGAGGTTCAGATAAAAATGGAAACTGATGATGATAAAAATTTTTTAAATGTGGATAATGAACTGACAGATAAAACGGATACATCATTTGCGTATCATAATGAAACTACAGCGTTTTGTATTAACAAGAATGAAACGAATATTATGGATTATAATATTGTAGAAATATTATGTGATTTATGTGATAGAGTTTTTACAAGTATCGATGAACTAACATATCACGAAACAGTCGTTCATCATACAAATAACGTAACTAATGTTATCAATAATAAATTATGCTGCATTTATTGCGATGCATCCTATTTAAGTGAAAGTGACGTTAGAAATCACATCACATTAAAACATTTTAATTTAAAAGATTCGAATATGATATTTACTTGTGATATTTGTAAATTGAATATTGGCAAATTTAAAAAATTAGACCATCATATCACATCCAAACATGTAAAACCATTTAAATGCGAAAAATGTAAAAAACATTTCGGTCATCTTATATGCTTAAAACAACATTTATTAAAACATAATAATAACGGTATGTGTAAACTGTGTTCAATTTCGTTCATATCTGCGGCATCATTACGTTATCATATGGTAAAGCAGCACGATGATTATAGCGATTTTAATAAAAGCGATTCGTTTTCAGTAGATCATTTACAGAAAAAGATTTACATTTCATACAAATTAAAAGGTTCACGAACTCAAGTAGAATTATTATCATTTTCATCGTGTCTTTTATGTGATGCCGAATTTATGCGTGAATCGTCCGCAAGACTACATATGACCCATCATTGTAATCTAAAATATAATTCATTTATTTGTGAAATTTGTCGGCAAACATTTGATACATATAGAAAATTATGCAACCATTTTTTTAATTTACACTCAAATAGATTTGAATGTAAAATATGTAATGCAAAATTTGCAATAAAATTAAGTTTTAATCGTCATTACAATAAACATCTATCTCCTAAAATTGTAAAATGTCATATTCATCAAAACCAAATTAAAATTGAATCAGATAAAGATACAAATTCGGTAAATAATGGCATAATCGAAAGAAATAATTCTAATTATGCGGATGATTTTCAAGTGGAAGATAAAACTAATATATTAAATTATCAGAAGAATTCAAACATTGATTTGAATACAATACAATACAATGAACAAAATGTGAATGCAATTATTGATGTATTATGTTATGTTTGTAATAAGGTTCTTAGAAGTGTTGAAGATTTAGATGAACACAATATCACATGTATTAATACTGCTATTAAATTAAATGAATCTTTATCAATATATTATAAAAATACAACAGTTTCTAATTTGATTTGTTGTCTATTTTGTGATTTACAAATCCATAATGAAACAATTTTAAGAAATCATGTCACAACAGAACATTATAATTTACAAAATAATTCTTTTACTTGTGATATTTGCCAACGTACATATAAAAACTATTCAACATTAAATACTCATTTTCGACATGTTCATTTAAATGTATTTAATTGTAAAATATGCAATAGACAATTTGCAAGAAAATTAAGTCTAACTAAGCATCAGAAAATACACACTATGACCTATGATCAAATAGCATTATGCAAAATTAGTGAAGATGCCTATGATTGTAGGATTTGTAATAAAACATTTAATTTCAAACATAAATTCTATGTTCATATGGATGAGGTCCATCCGGAATCAAATAAATGTCATATATGCAATAAAACATTTTCAACAAGACGAAATTTAACTAGACATATTGCAACAATACATGAATATCCTGGCAAATATGAATGTCCCCTTTGTGCAGAGAAATTTAGTCAGAAAATAACCTTTAAATGTCATTTAATGGTTCATACCGAATTAAAGAAATATCAAAAGAAAAAAATTTAA
Protein Sequence: MDHLTNVWYLTDYSLIKIESIEEAYEIIKKLQQKYLEEIAEKKALEQIISELNEKLRILENNFNRKNSTSSDFKLNTSGDYDDHDNEDNKYGNSVLLQDKFTSDVNNSIDIYEVQIKMETDDDKNFLNVDNELTDKTDTSFAYHNETTAFCINKNETNIMDYNIVEILCDLCDRVFTSIDELTYHETVVHHTNNVTNVINNKLCCIYCDASYLSESDVRNHITLKHFNLKDSNMIFTCDICKLNIGKFKKLDHHITSKHVKPFKCEKCKKHFGHLICLKQHLLKHNNNGMCKLCSISFISAASLRYHMVKQHDDYSDFNKSDSFSVDHLQKKIYISYKLKGSRTQVELLSFSSCLLCDAEFMRESSARLHMTHHCNLKYNSFICEICRQTFDTYRKLCNHFFNLHSNRFECKICNAKFAIKLSFNRHYNKHLSPKIVKCHIHQNQIKIESDKDTNSVNNGIIERNNSNYADDFQVEDKTNILNYQKNSNIDLNTIQYNEQNVNAIIDVLCYVCNKVLRSVEDLDEHNITCINTAIKLNESLSIYYKNTTVSNLICCLFCDLQIHNETILRNHVTTEHYNLQNNSFTCDICQRTYKNYSTLNTHFRHVHLNVFNCKICNRQFARKLSLTKHQKIHTMTYDQIALCKISEDAYDCRICNKTFNFKHKFYVHMDEVHPESNKCHICNKTFSTRRNLTRHIATIHEYPGKYECPLCAEKFSQKITFKCHLMVHTELKKYQKKKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -