Pfun007900.1
Basic Information
- Insect
- Penthetria funebris
- Gene Symbol
- -
- Assembly
- GCA_027564355.1
- Location
- JANSTX010005559.1:15400-38105[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0022 0.13 12.6 0.4 3 23 154 175 153 175 0.95 2 19 0.35 21 5.7 3.4 1 21 262 282 262 285 0.89 3 19 0.0014 0.089 13.2 3.8 1 23 289 311 289 311 0.99 4 19 0.001 0.064 13.6 0.5 1 23 320 342 320 342 0.91 5 19 0.019 1.2 9.7 0.1 1 22 514 535 514 537 0.88 6 19 0.0031 0.19 12.1 0.5 3 23 908 929 907 929 0.95 7 19 0.0016 0.1 13.0 1.6 2 23 949 971 948 971 0.95 8 19 0.013 0.81 10.2 2.0 1 23 977 999 977 999 0.96 9 19 1.1 69 4.1 4.3 3 20 1003 1020 1001 1022 0.93 10 19 1.8e-05 0.0011 19.2 2.0 2 23 1027 1049 1026 1049 0.96 11 19 0.069 4.3 7.9 2.9 1 23 1122 1145 1122 1145 0.94 12 19 0.00099 0.062 13.7 1.2 2 23 1189 1211 1188 1211 0.97 13 19 0.0059 0.37 11.3 0.3 3 23 1404 1425 1403 1426 0.93 14 19 0.067 4.1 7.9 8.9 1 23 1498 1520 1498 1520 0.98 15 19 0.0029 0.18 12.2 0.3 3 23 1526 1547 1525 1547 0.95 16 19 0.65 41 4.8 0.9 2 23 1588 1609 1587 1609 0.95 17 19 0.17 10 6.7 4.2 1 23 1617 1640 1617 1640 0.89 18 19 0.0051 0.32 11.5 1.6 1 23 1644 1666 1644 1666 0.98 19 19 1.9e-05 0.0012 19.1 2.1 2 23 1673 1695 1672 1695 0.95
Sequence Information
- Coding Sequence
- ATGGATTATCCAATGGAGGACGTTTGGTATTTACAAGATTACCCAACAGATAAAATTGCGTCTATAGATAAAGCATGTGAAATTATTAAGAAGTTGCAGAAGAAATTGTCTAATGAAATTAAAGAAAAAAGGGCGTTGGAACAGATAATTTTAGAGTTAAATGAAAAAGTAAAATTTTTAGAAAATACTTTAAATAGTCGTCATAGCAATGAATCGTCGGAATGTACAATTAATGAACTTAATAATTTAGAGATGCTTGAAGTAAAATTAAAAATAGAACCTGATGAAGATAGTAATAATTCCTTGAATAATGAAAATAATACATATGAATGTAGCATTGAATTGGAAAAGAGTCCTGATGGGACAGTTATTTGTAATAAAAAAAAAGATGAGATTAGTTTGAATCAAATGAATGATCAACATGCATATACAAATACCAGTATTATGATGGATTTATTATGCGATTCTTGCAATGAAACTTTTAAAAGTAGTGACGATTTAGCAATACATAAGAAACAAGTTCATAAATTAAAACCAAATAATACTGAAAATTGCTCGAACAAAGCATATAAGAAAATTGATAATAAACAAATTGGAACAATAATTCAATCAAATAAATCTTCATTAAATTCAAGACACAATAAAAAAAATGAAAAATCCTGTGCCAAACAAAAATCCAAAGACATTTTTTGTCTATTATGTGACTTAACTTTTTATTGTGAAACAACTGCACGAAATCATATGTTAATGCAACATTATAATACGAGAACGGCTATCGATTCATTTTCTTGTGACATTTGTTACCGAAAATTTCAGAAATACAAACAATTTACCAATCACTTTTATGGTGTACATATGAATAATTTTCAATGCGAAATATGTAATAAGAAACATGCAACAAAGGCAAATATGCAAAGACATTATAAAACCCATTTCAATTCATCTGAACAAATATTATTTATGTGCGAAATTTGTTCAACAACGTTTAAAACTAATAATGGATTAAAAGTACATTCTGTATTGCATTTGGACAAATATCCTTATGTAtATGTCAATATAAAAACATCTGTACTAATCAATTTATTAAACATTATGGATTATTCAATGAGTGATTTATGGTATTTAAAAGATTACGAATCAAATAAAATAATGTCTATAGATGAGGCATGTGAAATTATTAAAAAATTACAGAAGAAATTGTTAAACGAAATTAAAGAAAAAAAATCATTGGAGAAGATAATTGTAGACTTAAATGAAAGGATAAAATATTTAGAGAATAATTTAAATAATCGTCATAGTATCGAATCGTCGGAACCAACAATTGACGAACTTAATAATTTAGAGATGCTTGAAGTAAAATTAAAAATTGAACCAGATGAAGAAAGTAGTTCCTTAAATAATGAAAATAATAAATATGATAATTGCATTGAACTGATGCAGCGTCATGATGGTGCCGTTATATGTAGCAAAAAAAATGAGAACATTAATTTAAATCAAATGAATGACCAAAATTTATATACAAATACTAATTTTATAGAGTTTATATGTGATTTGTGTAATGAAATTTTTAAAAGCAACGCTGATTATATAATACATAATGAACAAACACATAAATTAGAATCCAATAATGTTGTCAATCTTTCAAAAAAAACATACAAGCAAAAGAATGCTAAATTAACGACAATAATGCATTCGAATAAATCTTCAATAAAATCAAAACAATTAAGCCATGAAGAAACTAATAATGTTTATTATATTGATAATAATACAACAGAACACCATAAGAAAAATGAAAAACGTTGTAACAAACAAAAATCTAAAGATATTGCTTGTCTTCTTTGTAATTTAACATTCTATTGCGAATTAAGTGCAAGAAATCATATGTTAATACAACATTATAATTCACAAAAAAAACTGTCTGATGAAATTAAAGAAAAGAAAGAATTGGAACAAAAAATATTGGAATTGCATGAAAAGATAAGACATCTGGAACATAATCTACATAGTACTGTAAAAACGGAATCAAATGAAATTAAAAATGTTGAGATTTACGAAGACCAGTTACAAGTGGCACCAGATCAAGACAGAATATCATTAACTAATGATCTATTAAAAACAGATAAAAATTCATCTGACACTGGAATCGATGATGAAAGTAATAAATTAGTTTTAAATTGGAAAAATGTAGAGAATCATTTAAATATAATTAAAACGTATGAAAAAAATGTGAATTCAACTACTCATAAAAATACTGATCCATATAATACAGTTTTCATAAGTACCGGTGACGCTGATAATACAACAAATACTACTATTGAGAATCAGGCAAACAAAGACCATTCCTCAGACGGTAATAGAATTAATAACAATATGAAACAATCATCATTAAAATCAAAAATATTGAAACGCAATACCTATAATAGAAATCATGATAAGAAAAAACACAACAGTGAAAAACTAGTATCCCAACCAAAATTTAAAAATATTATGATTGATGGCATTGAATTAAAAATGGAATGTGATAATAGAATAAACAATAAAAGTTTAAAAAGTacaatgaataaacataatcaaaataatactgatgaagatcactatcatgatgataagctttatgatgttgacgattgtaatagtggtactgttggtgacagtgataatattgtcgatgtttgtgattataataaGAATATAAGAGTTTCTAATACTATTGAAATATTATGTGAAAAATGTGATGAAACTTTTACAACATTAGATGAAATAAAAAATCATAAACAACAAATTCACGAAAGTATTGATGAAGAAACAGCAGCACATATAAATTATAAAAAAGATAATCATTTAACTTGTCTATTTTGTAATGAAAATTTTACTAGACAACAATTAGTAACTAGACACATTAGAAACAAACATTATGGAAAGAAGCTATTTACATGCGATATTTGTAAAATTGAATTTAATTTTAAAACATTATTAAAACACATGAAGAATAATCATTATATTTTTTGTAAAATATGTATGAAATACTTTACAACAAAATTTTGTTTCCAAAAACATAGATCCAATTGTTGTAAAATTACATGTAAACTTTGTACAGAGAAATTTAAATATCAATCAAATTTAAAAAATCATATGATAAGCAAACACAGTAGAATTAATGTTCATGAAGAAACAAAACCATTTATATATTATGAACAACAGAAATTACTTCTAAGAAAACGTTGTTACACATTGAATGCAACATCATCATTATTATCACAACTATCCTTTTGTTCATGTATATATTGTGATGCAAAATATTTGTATGAATCACAAGCTATAAAACATTTAAGACTTCGGCACATTAATTATAATAATGAATTATTTACTTGTGATTTATGTCAACGTACATATGAAACATTTATTCAATTACGTGTACATTTTGGGACATGTCACATaaaacgttttcaatgtgatatatCTTCACAATTAGAACGTCACAAACAATTGCAAAATTGCATTAATTCTTATACAAGATTACGTTATAAAAACCAACATTTCAATAATGAAAAGGCATCGGAAACGAAATGTCCATATTGTAATAAAGAATTTGAAGTTAAACGTAGTTTAACATTTCACATCCGTAAAGTACATCCAGAAAATTATAATAATAAAAATACAAATACGATATTAAAAATCATATTCTACAGTCTATTTATTTTAAGTATGGAATATTTAACGAATGTTTGGTATTTAACTGATTATTCACTAATAAAAATTGAGTCAATTGAAGAAGCATATGAAATTATTAAAAAGTTTCAACAGAAATTATCAGAAGAAATTGAAGAGAAAAAAGCATTGGAACAAATAATATCGGAATTAAATGAAAAGTTAAGAATTTTGGAAAATAATTTTAATCGTAAAAATAGCACATCTTCTGATTTCAAATTGAATACCAGTGGGGATTATGATGATCATGATAATGAAGATAATAAATATGGCAATAGCGTATTGTTACAAGACAAATTTACGTCCGATGTGAACAATAGTATAGATATTTATGAGGTTCAGATAAAAATGGAAACTGATGATGATAAAAATTTTTTAAATGTGGATAATGAACTGACAGATAAAACGGATACATCATTTGCGTATCATAATGAAACTACAGCGTTTTGTATTAACAAGAATGAAACGAATATTATGGATTATAATATTGTAGAAATATTATGTGATTTATGTGATAGAGTTTTTACAAGTATCGATGAACTAACATATCACGAAACAGTCGTTCATCATACAAATAACGTAACTAATGTTATCAATAATAAATTATGCTGCATTTATTGCGATGCATCCTATTTAAGTGAAAGTGACGTTAGAAATCACATCACATTAAAACATTTTAATTTAAAAGATTCGAATATGATATTTACTTGTGATATTTGTAAATTGAATATTGGCAAATTTAAAAAATTAGACCATCATATCACATCCAAACATGTAAAACCATTTAAATGCGAAAAATGTAAAAAACATTTCGGTCATCTTATATGCTTAAAACAACATTTATTAAAACATAATAATAACGGTATGTGTAAACTGTGTTCAATTTCGTTCATATCTGCGGCATCATTACGTTATCATATGGTAAAGCAGCACGATGATTATAGCGATTTTAATAAAAGCGATTCGTTTTCAGTAGATCATTTACAGAAAAAGATTTACATTTCATACAAATTAAAAGGTTCACGAACTCAAGTAGAATTATTATCATTTTCATCGTGTCTTTTATGTGATGCCGAATTTATGCGTGAATCGTCCGCAAGACTACATATGACCCATCATTGTAATCTAAAATATAATTCATTTATTTGTGAAATTTGTCGGCAAACATTTGATACATATAGAAAATTATGCAACCATTTTTTTAATTTACACTCAAATAGATTTGAATGTAAAATATGTAATGCAAAATTTGCAATAAAATTAAGTTTTAATCGTCATTACAATAAACATCTATCTCCTAAAATTGTAAAATGTCATGTATGCAGTAAAACATATGCAAATAAGGCAAATTTTAGAAAACATATGTTAAACATACATAAATTAATTACGACAATATGA
- Protein Sequence
- MDYPMEDVWYLQDYPTDKIASIDKACEIIKKLQKKLSNEIKEKRALEQIILELNEKVKFLENTLNSRHSNESSECTINELNNLEMLEVKLKIEPDEDSNNSLNNENNTYECSIELEKSPDGTVICNKKKDEISLNQMNDQHAYTNTSIMMDLLCDSCNETFKSSDDLAIHKKQVHKLKPNNTENCSNKAYKKIDNKQIGTIIQSNKSSLNSRHNKKNEKSCAKQKSKDIFCLLCDLTFYCETTARNHMLMQHYNTRTAIDSFSCDICYRKFQKYKQFTNHFYGVHMNNFQCEICNKKHATKANMQRHYKTHFNSSEQILFMCEICSTTFKTNNGLKVHSVLHLDKYPYVYVNIKTSVLINLLNIMDYSMSDLWYLKDYESNKIMSIDEACEIIKKLQKKLLNEIKEKKSLEKIIVDLNERIKYLENNLNNRHSIESSEPTIDELNNLEMLEVKLKIEPDEESSSLNNENNKYDNCIELMQRHDGAVICSKKNENINLNQMNDQNLYTNTNFIEFICDLCNEIFKSNADYIIHNEQTHKLESNNVVNLSKKTYKQKNAKLTTIMHSNKSSIKSKQLSHEETNNVYYIDNNTTEHHKKNEKRCNKQKSKDIACLLCNLTFYCELSARNHMLIQHYNSQKKLSDEIKEKKELEQKILELHEKIRHLEHNLHSTVKTESNEIKNVEIYEDQLQVAPDQDRISLTNDLLKTDKNSSDTGIDDESNKLVLNWKNVENHLNIIKTYEKNVNSTTHKNTDPYNTVFISTGDADNTTNTTIENQANKDHSSDGNRINNNMKQSSLKSKILKRNTYNRNHDKKKHNSEKLVSQPKFKNIMIDGIELKMECDNRINNKSLKSTMNKHNQNNTDEDHYHDDKLYDVDDCNSGTVGDSDNIVDVCDYNKNIRVSNTIEILCEKCDETFTTLDEIKNHKQQIHESIDEETAAHINYKKDNHLTCLFCNENFTRQQLVTRHIRNKHYGKKLFTCDICKIEFNFKTLLKHMKNNHYIFCKICMKYFTTKFCFQKHRSNCCKITCKLCTEKFKYQSNLKNHMISKHSRINVHEETKPFIYYEQQKLLLRKRCYTLNATSSLLSQLSFCSCIYCDAKYLYESQAIKHLRLRHINYNNELFTCDLCQRTYETFIQLRVHFGTCHIKRFQCDISSQLERHKQLQNCINSYTRLRYKNQHFNNEKASETKCPYCNKEFEVKRSLTFHIRKVHPENYNNKNTNTILKIIFYSLFILSMEYLTNVWYLTDYSLIKIESIEEAYEIIKKFQQKLSEEIEEKKALEQIISELNEKLRILENNFNRKNSTSSDFKLNTSGDYDDHDNEDNKYGNSVLLQDKFTSDVNNSIDIYEVQIKMETDDDKNFLNVDNELTDKTDTSFAYHNETTAFCINKNETNIMDYNIVEILCDLCDRVFTSIDELTYHETVVHHTNNVTNVINNKLCCIYCDASYLSESDVRNHITLKHFNLKDSNMIFTCDICKLNIGKFKKLDHHITSKHVKPFKCEKCKKHFGHLICLKQHLLKHNNNGMCKLCSISFISAASLRYHMVKQHDDYSDFNKSDSFSVDHLQKKIYISYKLKGSRTQVELLSFSSCLLCDAEFMRESSARLHMTHHCNLKYNSFICEICRQTFDTYRKLCNHFFNLHSNRFECKICNAKFAIKLSFNRHYNKHLSPKIVKCHVCSKTYANKANFRKHMLNIHKLITTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -