Basic Information

Insect: Penthetria funebris
Gene Symbol: -
Assembly: GCA_027564355.1
Location: JANSTX010027577.1:707-8717[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0047 0.29 11.6 0.3 1 23 320 342 320 342 0.98

2 17 3.3 2e+02 2.6 0.6 1 23 346 369 346 369 0.83

3 17 0.00014 0.0087 16.4 3.4 2 23 403 424 402 424 0.97

4 17 7.7e-05 0.0048 17.2 0.7 2 23 429 451 428 451 0.95

5 17 0.0031 0.19 12.2 0.5 1 23 457 479 457 479 0.98

6 17 0.00095 0.059 13.8 3.7 1 23 485 507 485 507 0.97

7 17 3.5e-05 0.0022 18.3 3.8 1 23 513 536 513 536 0.96

8 17 2.9 1.8e+02 2.8 7.4 1 19 542 560 542 564 0.89

9 17 0.0013 0.081 13.3 0.2 1 23 570 593 570 593 0.96

10 17 0.26 16 6.1 0.5 1 23 906 929 906 929 0.96

11 17 0.0032 0.2 12.1 3.4 2 23 931 952 931 952 0.96

12 17 4.1e-05 0.0025 18.1 2.2 1 23 957 979 957 979 0.92

13 17 0.026 1.6 9.2 1.5 1 23 985 1007 985 1007 0.94

14 17 5.2e-05 0.0032 17.7 1.3 1 23 1013 1035 1013 1035 0.98

15 17 1e-05 0.00064 19.9 0.7 1 23 1041 1064 1041 1064 0.98

16 17 0.00012 0.0075 16.6 1.4 1 23 1070 1094 1070 1094 0.96

17 17 0.00014 0.0089 16.3 0.7 1 23 1100 1123 1100 1123 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0047	0.29	11.6	0.3	1	23	320	342	320	342	0.98
2	17	3.3	2e+02	2.6	0.6	1	23	346	369	346	369	0.83
3	17	0.00014	0.0087	16.4	3.4	2	23	403	424	402	424	0.97
4	17	7.7e-05	0.0048	17.2	0.7	2	23	429	451	428	451	0.95
5	17	0.0031	0.19	12.2	0.5	1	23	457	479	457	479	0.98
6	17	0.00095	0.059	13.8	3.7	1	23	485	507	485	507	0.97
7	17	3.5e-05	0.0022	18.3	3.8	1	23	513	536	513	536	0.96
8	17	2.9	1.8e+02	2.8	7.4	1	19	542	560	542	564	0.89
9	17	0.0013	0.081	13.3	0.2	1	23	570	593	570	593	0.96
10	17	0.26	16	6.1	0.5	1	23	906	929	906	929	0.96
11	17	0.0032	0.2	12.1	3.4	2	23	931	952	931	952	0.96
12	17	4.1e-05	0.0025	18.1	2.2	1	23	957	979	957	979	0.92
13	17	0.026	1.6	9.2	1.5	1	23	985	1007	985	1007	0.94
14	17	5.2e-05	0.0032	17.7	1.3	1	23	1013	1035	1013	1035	0.98
15	17	1e-05	0.00064	19.9	0.7	1	23	1041	1064	1041	1064	0.98
16	17	0.00012	0.0075	16.6	1.4	1	23	1070	1094	1070	1094	0.96
17	17	0.00014	0.0089	16.3	0.7	1	23	1100	1123	1100	1123	0.96

Sequence Information

Coding Sequence: ATGAACTGTTTAATTTGTAATTTATTTTGTGATCCATTTGATGGGAATGGTCATTATGTGGCAGCTGCACAAACAATTAAAACGCAAACATCATATATTGAATTAATAGAACAATTAGTTGACAAAAAGGTATCATCAAAAATGAATATATCAAAATTTTCAAACAATTATGTGTGTGATACATGTTCTGTACTAATCGAAAGTTATGATAGCTTACAATATGAGGCAACAATAAATCAACAATTATTGATAAGACAAATATATCGCAATTTAAATATTAGAAAATCAAATGAAAATAGTTATTTATTAGTGGAAATTGACACTGAAGCTGGAACAACATTTCATAAAGTTAGAAAAAATCAATATAATTGTAATAGTTGTTCATTTAAAACAATTTATGCTGATACAATATCACCACATTATCGATATCATCAACTTGGTAATGTTTCTGGACACGATAAAGAAGCTGTGCAACAATCACACAATGAAACAAAACAAATATTATTAAATGAATATAATATTGATGATATAATTGATGAACCATGTGAATCAAAGAATATTGAAAATTATTCATTCGATATTAATGCGACAACAAAAAATACAATATCATTTAATACTATTAAATCTAATAAAATTTATTCAGAAGACGAAGACGATGAAGAAGAACATCGACAACAATATGAACATTCAGATGTAGAATATTTAAGTGAACAAATTGAAGAATTAAATAATATTTATACATCAAGTAATAGTAGTGAAAATGTTCATCAAAACAATGTAATGATTTCAGATGAAAAACAATTTGAACATGATGTTAATACTGTTGTACCGCATGATGGTCAAAATGGTAATTTTAAAGTATCATCAATTGTAAATAGAATCGAAAGAGTTGATTTAGATTTTTTAAATGAAAACATTCCAATTGATAATTATCGTAAAATGATGCGAAAAAAATCATTTAGATGTAAATTATGTGTTATTGAATTTATAAACTATTCTGAAATTATTAATCACTTAAAAATGCACAAAAGAATGTACAAATGTCAACATTGTCAAATTTTTGAAAATAGTGAAACTGCTATTATGAATCATATTAATATTGAACATTTGAATCCATTGTGTACACAATGTGGATGCAACAAAATATGTAATCAATCATTTTACAGCAAAGAATTACATAATAAACATTTAGTAAATAATCATTTAAAATGTAATAAATGTGATGAATATTTTAAAGATAGACATTTATTAAAAATACACAAAAGAATACACAAAGAAATTGTAAAATGTGAATTATGTGATAAGACTTTTAAAGGAAAATCAGGCCTTCAATATCATACAAATCAAGAACATATTGGATTATTTAAATATAAATGTGAATTTTGTCCAAGAAAATATCAGAAACCATTAAATTTAATAGAACATAGAGCAATGCATACAAAGGAAATACTTTACATATGTGAACTATGTGGAACAACATTTCGGCATAATGCAACATATCATATGCATTTAAAATTACATAAAAATGTCTATCCCTATAAATGTATTGATTGCCCAAGAACATTTAAGACATCATCAAATTTATGTGCACATCGACGGCAAAAACATATTGGTAGAAATTTGTATCAATGTGAATATTGTAGTAAACGATATATTTCAAAATATACATATAAATGTCATGTAAGTTGTCATACAGGTGTCTATTTATATAATTGTACAATATGTTCAAAGGGATATGCCAGAAAATATATATTAGCTAAACATATGGCAAGTGTACATAATGACAATTCAATGATTCGAAAACAAGCATTAGAATATAAAGTTATTATTCGTCCAGATAAACCATTAAGTCATTTTGAGAATGTTGAAGCTGATGAGGATATTAAGAATAAGATGAAAATAGATGAAGAGAATTTTTCACCAAAATTTTTAAATATCACCAACGATAGTAAGATGTGCATTACATGTTCAACGTTAATTGAAAATTATGATATTTTACAATATGAATTGATGATTGCTGGCAATTTATTAAAGCGTCAATTTTATAGAACATTAAATATACAAAAACAGTTTCACGATGGGTATGTATTAATTGATATTGACACAGAAGCCGGTAGTTTATTTCATAAATATACGAAAAATGAATATATTTGTATTCAATGTTCATTTAAAACATTTTATTCAGACACAATAGCACCACATTATCGTTACCATCAATTAATCGACAGCACAACTGATAATATTTTACATGAAAAACAAACTgataaatatgtaaatattgaagtattagattatattgatgaaagtactgttaatgaaaatgtaaataatgatgaacaattaggtgacaataattctgagattgatggggttgttgatgatgattattattatgatagtaaaaatgataatggtgatgatagtggtgctgatattgatgataatgatgataataaatatacaatattatataataatgaaggtaacataaatgttgctcaatcatcaaaaatacaaacaatcaaacgtgaaagggatagttttaaaaatgaagaagaattactggaaattATATCAGAAAATGTTACACCAAAAAAAAATGTGATTGAACGCGTGAAAAGAGGGCCCAGAAGTTGTGCAATTTGCGGAGAAAAAAATAAAACAATTAATCATTGTGATCATTCAATTGCAATTGCTAATGGATTATTGGATAAATATAATTGTGAATCATGTGATGGAAAATTCTTTGAAATGGGATTACTGATAAAGCATACACTTACGAAACATGCAAAATGTGATATTTGTAAAAAAACATTTAAAAGTACAGCAACAGCCAGACACCATCAAACAGTTCATCAAACCAATGAATATAAATGCAATATTTGTAATAAGAAATTCAGATCGAAGGCAGGTTATAGACGCCATAATGAGGATCATCTAGGAAAATTTCGATATTTTTGTGAATATTGTCCAAAAAAATATAATACAAAAATCAGATATCTTGAACATTTAACAGAACATACAAAGGAAACACTTTATGTTTGTGAAATATGTGGACAAAAATTTCGACATAATGCAACATATCGTTTACATGTTAAATGGCATACAAATCCTTTACCATTTAAATGCGAAATTTGTTTAAAGGATTTTCGATCACAATCGTTATTGGCTGTACATCGACGACGTGATCATTTGAATGAACGTCCATTTATTTGTGAATTTGGTGATTGTAAGAAAACATTTTTCTCGAAAGGAATGTATCGTCGACATATGTCGGTACACAATGGTATTTATTTCTATAATTGTACAATTTGTCCAAAGGGATTTAATAAAAGAGATTATTATGGTAGACATATGGCCAAACTTCATAACGATTATTCAATTATTAATAACAAACGTGTTTTAGAGTATAAAGTTGTTATACGACCACAACCAAATCCGCAAGAAGTGACAGAAGTTGAAGAAATGTTAGAAGAAAGTTGTAATGAATCCGAAATTAATATTAATCAATAG
Protein Sequence: MNCLICNLFCDPFDGNGHYVAAAQTIKTQTSYIELIEQLVDKKVSSKMNISKFSNNYVCDTCSVLIESYDSLQYEATINQQLLIRQIYRNLNIRKSNENSYLLVEIDTEAGTTFHKVRKNQYNCNSCSFKTIYADTISPHYRYHQLGNVSGHDKEAVQQSHNETKQILLNEYNIDDIIDEPCESKNIENYSFDINATTKNTISFNTIKSNKIYSEDEDDEEEHRQQYEHSDVEYLSEQIEELNNIYTSSNSSENVHQNNVMISDEKQFEHDVNTVVPHDGQNGNFKVSSIVNRIERVDLDFLNENIPIDNYRKMMRKKSFRCKLCVIEFINYSEIINHLKMHKRMYKCQHCQIFENSETAIMNHINIEHLNPLCTQCGCNKICNQSFYSKELHNKHLVNNHLKCNKCDEYFKDRHLLKIHKRIHKEIVKCELCDKTFKGKSGLQYHTNQEHIGLFKYKCEFCPRKYQKPLNLIEHRAMHTKEILYICELCGTTFRHNATYHMHLKLHKNVYPYKCIDCPRTFKTSSNLCAHRRQKHIGRNLYQCEYCSKRYISKYTYKCHVSCHTGVYLYNCTICSKGYARKYILAKHMASVHNDNSMIRKQALEYKVIIRPDKPLSHFENVEADEDIKNKMKIDEENFSPKFLNITNDSKMCITCSTLIENYDILQYELMIAGNLLKRQFYRTLNIQKQFHDGYVLIDIDTEAGSLFHKYTKNEYICIQCSFKTFYSDTIAPHYRYHQLIDSTTDNILHEKQTDKYVNIEVLDYIDESTVNENVNNDEQLGDNNSEIDGVVDDDYYYDSKNDNGDDSGADIDDNDDNKYTILYNNEGNINVAQSSKIQTIKRERDSFKNEEELLEIISENVTPKKNVIERVKRGPRSCAICGEKNKTINHCDHSIAIANGLLDKYNCESCDGKFFEMGLLIKHTLTKHAKCDICKKTFKSTATARHHQTVHQTNEYKCNICNKKFRSKAGYRRHNEDHLGKFRYFCEYCPKKYNTKIRYLEHLTEHTKETLYVCEICGQKFRHNATYRLHVKWHTNPLPFKCEICLKDFRSQSLLAVHRRRDHLNERPFICEFGDCKKTFFSKGMYRRHMSVHNGIYFYNCTICPKGFNKRDYYGRHMAKLHNDYSIINNKRVLEYKVVIRPQPNPQEVTEVEEMLEESCNESEININQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -