Basic Information

Insect: Penthetria funebris
Gene Symbol: -
Assembly: GCA_027564355.1
Location: JANSTX010005859.1:13121-16879[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.9e-06 0.0003 21.0 0.8 1 23 25 47 25 47 0.98

2 14 0.00026 0.016 15.5 3.2 1 23 53 75 53 75 0.97

3 14 4.9e-07 3e-05 24.1 1.0 1 23 81 103 81 103 0.99

4 14 2.5e-05 0.0015 18.7 1.4 1 23 109 133 109 133 0.98

5 14 2.5e-05 0.0016 18.7 0.7 1 23 139 161 139 161 0.99

6 14 1.7e-05 0.0011 19.3 6.1 1 23 167 190 167 190 0.97

7 14 0.41 26 5.4 1.4 2 23 425 444 424 444 0.86

8 14 4.7 2.9e+02 2.1 1.9 3 14 495 506 494 513 0.79

9 14 1e-05 0.00062 20.0 2.1 1 23 518 540 518 540 0.98

10 14 6.7e-05 0.0042 17.4 0.3 2 23 547 568 546 568 0.96

11 14 8e-07 5e-05 23.4 5.4 1 23 574 596 574 596 0.99

12 14 2.3e-05 0.0015 18.8 2.0 1 23 602 624 602 624 0.99

13 14 0.0015 0.094 13.1 4.6 1 23 630 652 630 652 0.98

14 14 1.1e-05 0.00069 19.8 2.9 1 23 658 681 658 681 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.9e-06	0.0003	21.0	0.8	1	23	25	47	25	47	0.98
2	14	0.00026	0.016	15.5	3.2	1	23	53	75	53	75	0.97
3	14	4.9e-07	3e-05	24.1	1.0	1	23	81	103	81	103	0.99
4	14	2.5e-05	0.0015	18.7	1.4	1	23	109	133	109	133	0.98
5	14	2.5e-05	0.0016	18.7	0.7	1	23	139	161	139	161	0.99
6	14	1.7e-05	0.0011	19.3	6.1	1	23	167	190	167	190	0.97
7	14	0.41	26	5.4	1.4	2	23	425	444	424	444	0.86
8	14	4.7	2.9e+02	2.1	1.9	3	14	495	506	494	513	0.79
9	14	1e-05	0.00062	20.0	2.1	1	23	518	540	518	540	0.98
10	14	6.7e-05	0.0042	17.4	0.3	2	23	547	568	546	568	0.96
11	14	8e-07	5e-05	23.4	5.4	1	23	574	596	574	596	0.99
12	14	2.3e-05	0.0015	18.8	2.0	1	23	602	624	602	624	0.99
13	14	0.0015	0.094	13.1	4.6	1	23	630	652	630	652	0.98
14	14	1.1e-05	0.00069	19.8	2.9	1	23	658	681	658	681	0.97

Sequence Information

Coding Sequence: ATGATGATTGGCACAATTGACAATGAATCAAAATATACAAGTAATATGGTAAAACATAGTGAATTACAATCATTTGAAtgtgatatatgtaaaaaattatttacaacaaaatataatgtaataaatcatataaaaattcacatcaataaaagggatcacaagtgtaaatactgtccattagcatttaatttgcgaacacaattaaatcgtcatttatacagtcattccgattcatataaatatcaatgtgatatatgcggtaatagttttaaatataataccacattgcgaactcacatacgaattcatactggtgaaaaaccatttaaatgtacaattaatggatgttcaaaagcattttcaacacatataagtttaaaattacacattcgcatacacaccggcgagaaaccatttaaatgtaatttatgtgaacgtggcttttcagatggttcaacattgaaaatacacaaacgtattcatacaaatgaaaatccatatatatgtcatttgtgtggaaaatgtacaaaacaggccagcaatcttaaatcacattaTAGATATTTTCATAAAATTTCCGATATAACTGGTAAACAAATACGTGCAAATGGTCGAGCACTTGCAATGTTCACAAATGATGTAATTAAAGATGCCATTCATCAGCCCAATGGCATTatacaattattggaattggctgttaataaacaaaatgagataatggtcaaaactgttgataatacaattaaaactacatttgataatgatgttgttgatgatgatgatgatgatgatgataataatatgcataatgaaagcggaaaacaaattgaatataaagaAACATTTAATATTATTGTTGATGATGCAGCAGATAGCCAATTAATGAATATAAAAGAAATAGATGAAGAAGAAGCATCTAAAATTGAAGAAAAATTAAAAATAATAGAAGAAAAACCAATGAATACAGAAGATGATTTTAGTAGGTTTCATGATACAACAAATCTGTTAAAATATAATGGAAATGATGGCGATCCAATTAAAAATACTAAAAGAGACACAAGAGATTTAAAAATACAAAATCACAATATTGAGTATGGCAACTTGGCCAAAAATAATATTCAGTCAATATCACAATTAGAATGTAAGAAACCAGAAATAAGTGATAATGATGATGATGACGATACAAAAGTTGAAAATATAAATATTGATGAAAATCCTAATTTACAATTTGACTACCTTCAAGTGTGCCCATTGAAAACGTATACCTATAAAACATGTAATATTTGTAATAGAAAATATATTAATTATGAAAAACATATGCTACGAAACCATAAACAAGATAGTTCTAAAGAAGAGTGTACCACAAATGTTAATATTAATGATAAACCATTAACACTATCAACAAATTCGATAACAATTAAAGCATCGATCATTTCAAATAAACAACAGACAACATCAAGGAAGGGAATTAAATATAAAATATGTAACATTTGTAATCGAAAGTATATAAATCATGAAGATcatatgcgacaacatactcatgaaaaaccatacgaatgtgaaatatgtaaaaagacattcaaattaaaagattatctacgtttacataaaaaaatccacacaaatgtgaaaaatattatgtgtgaacaatgtggtgcagcattttattttaacacagatttacgtagacatttacaacgtcattctgatgttcgtccattcaagtgttcggaatgtgaaaagtgttttaaggattcgagtacattaaaattacatacgagaacacatacgggtgttaaaccatttaaatgtacattatgtgaaaaatcgtttacaacaagtatgggtcaaaaattgcatatacgtacgcacacaggtaataaaccgtatgcttgtcaatattgtagtagtcgattttgtgatttttcaacatttaaacagcatatacgaatacataccggtgaacggccatatgaatgtcacctttgtggcaaaggaacgacacaagcaggtaatttaaaatcacatcTTAGACATTTTCATAAGATTATTGTGCACAATGTGTCGATGACACGAAAGTAA
Protein Sequence: MMIGTIDNESKYTSNMVKHSELQSFECDICKKLFTTKYNVINHIKIHINKRDHKCKYCPLAFNLRTQLNRHLYSHSDSYKYQCDICGNSFKYNTTLRTHIRIHTGEKPFKCTINGCSKAFSTHISLKLHIRIHTGEKPFKCNLCERGFSDGSTLKIHKRIHTNENPYICHLCGKCTKQASNLKSHYRYFHKISDITGKQIRANGRALAMFTNDVIKDAIHQPNGIIQLLELAVNKQNEIMVKTVDNTIKTTFDNDVVDDDDDDDDNNMHNESGKQIEYKETFNIIVDDAADSQLMNIKEIDEEEASKIEEKLKIIEEKPMNTEDDFSRFHDTTNLLKYNGNDGDPIKNTKRDTRDLKIQNHNIEYGNLAKNNIQSISQLECKKPEISDNDDDDDTKVENINIDENPNLQFDYLQVCPLKTYTYKTCNICNRKYINYEKHMLRNHKQDSSKEECTTNVNINDKPLTLSTNSITIKASIISNKQQTTSRKGIKYKICNICNRKYINHEDHMRQHTHEKPYECEICKKTFKLKDYLRLHKKIHTNVKNIMCEQCGAAFYFNTDLRRHLQRHSDVRPFKCSECEKCFKDSSTLKLHTRTHTGVKPFKCTLCEKSFTTSMGQKLHIRTHTGNKPYACQYCSSRFCDFSTFKQHIRIHTGERPYECHLCGKGTTQAGNLKSHLRHFHKIIVHNVSMTRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -