Basic Information

Insect: Penthetria funebris
Gene Symbol: -
Assembly: GCA_027564355.1
Location: JANSTX010006785.1:607-5068[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0042 0.26 11.7 0.1 1 23 148 170 148 170 0.98

2 15 0.0001 0.0064 16.8 1.0 2 23 175 197 174 197 0.90

3 15 0.0074 0.46 10.9 6.2 3 23 209 230 207 230 0.95

4 15 1.6 99 3.6 0.0 5 20 339 354 338 356 0.90

5 15 0.00076 0.047 14.1 1.5 3 23 470 490 468 490 0.96

6 15 5.3e-06 0.00033 20.8 4.5 2 23 496 517 495 517 0.98

7 15 8e-05 0.005 17.1 4.0 1 23 523 545 523 545 0.96

8 15 0.00012 0.0073 16.6 3.8 1 23 551 574 551 574 0.94

9 15 6.7e-07 4.1e-05 23.7 0.7 3 23 586 606 585 606 0.98

10 15 0.00017 0.011 16.1 3.6 1 23 611 633 611 633 0.99

11 15 3.3e-06 0.0002 21.5 0.4 1 23 639 661 639 661 0.96

12 15 1.9e-06 0.00012 22.2 1.0 1 23 667 689 667 689 0.98

13 15 8.3e-06 0.00052 20.2 0.8 3 23 697 717 695 717 0.96

14 15 1.4e-06 8.7e-05 22.7 0.8 1 23 723 745 723 745 0.99

15 15 5.8e-06 0.00036 20.7 0.9 1 23 750 773 750 773 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0042	0.26	11.7	0.1	1	23	148	170	148	170	0.98
2	15	0.0001	0.0064	16.8	1.0	2	23	175	197	174	197	0.90
3	15	0.0074	0.46	10.9	6.2	3	23	209	230	207	230	0.95
4	15	1.6	99	3.6	0.0	5	20	339	354	338	356	0.90
5	15	0.00076	0.047	14.1	1.5	3	23	470	490	468	490	0.96
6	15	5.3e-06	0.00033	20.8	4.5	2	23	496	517	495	517	0.98
7	15	8e-05	0.005	17.1	4.0	1	23	523	545	523	545	0.96
8	15	0.00012	0.0073	16.6	3.8	1	23	551	574	551	574	0.94
9	15	6.7e-07	4.1e-05	23.7	0.7	3	23	586	606	585	606	0.98
10	15	0.00017	0.011	16.1	3.6	1	23	611	633	611	633	0.99
11	15	3.3e-06	0.0002	21.5	0.4	1	23	639	661	639	661	0.96
12	15	1.9e-06	0.00012	22.2	1.0	1	23	667	689	667	689	0.98
13	15	8.3e-06	0.00052	20.2	0.8	3	23	697	717	695	717	0.96
14	15	1.4e-06	8.7e-05	22.7	0.8	1	23	723	745	723	745	0.99
15	15	5.8e-06	0.00036	20.7	0.9	1	23	750	773	750	773	0.98

Sequence Information

Coding Sequence: ATGAATTTGAATAATATATGCAGAACATGTTTAAAGGAGGACGTTGAAATGAAATCAATATTTGATGATGAGAATGAGAATGAGTTACCCAAAATTTCGTTGTCTTGCATGATATCAACCTGTACAATAACTACGATATCATCTATTGATGAACTTCCCAAGAAAATATGCAAACAATGTATAGAAAATCTTAAGACATCATATAATTTTAAGCAAACATGTGAAAATTCATTTATATCTTTAAAAAAAATGCTTGAAAATAATGTTACAAAATCAATTGAGGAAATAACTTTACAATTTGAACCACATATTATGGTTGACAATTCTTCGGATAATTTAAATATAAGTAATGAGACAATCAAAACGGAAAACATAAATATTCAATTAATAAATGAATTAAAACATATTGAAAAATGTACACAAACAGTACAAATTGGATTTTTTCCATGTGAAATATGTGTAGATAAATTTATTACCGAAGAGTCCTTAAAGGCACATCGTTTAACTCATAAAGACAATATTAAATGTCGTGTATGTTCAAAAGTATACACAAGACTTTCACATTTAAGAAGTCATATAGTTGCTTCACATCCCGGTATACTATTTACAATGCCGGAAATAATTTGTAATTTGTGTGATAAAAAATTTACAAGACATGAACATCATCGAAGGCATATGTTAGTTTATCATGATCAGAAAATCGATTTACAAagaattgcaaagacaaaatcgaaatgttcagatgaagaaaatgaggataatggtgatatttttgatgataatgataatgatgagcatgatgatgatgatgacgatgatgatgataataataatgataatgatgatcatgatgttgataataataatgataacaatgatgatgatgacgataactatgatacctacaatgatgtttgtgatggtgataataatattgtaagcattatagatgatgatattgaattaaatgcgaatgaagccaatgaaatcgtcaataatacattaaaatacgaaaattgtaataaatcttataataatgaaaataataTCGTACAACATCTTTCTGAACAACCAGAAATACAAACATCAAATGTAACCGATACAAAATTAAGAACACCACCaacaacattaaccattgaaattgttaagaccgaagatctattcgatattaataatagttatgaatattttaataatgaaaatgatgaagaacatattaataatgatgattgtattcaaattaatagtagtgacagtaatgttaataaaattgtaaacaattatgcagataatgatgataatgatgatgacgatgctgataaaaataatgtgaaacgtaaacgtggcagaccaaaaAAATCAGTAAAAAATGATGAACGATTaaaattgaaaaaagcaaaactattttgtaatatttgtaaggaaaaatttaccagtgacaaagatttggaaaaacataaaaaatggcatgatgaaaaaataaatcaatgtacaaattgtttaaaaacatttacacgtgcaacccatttaaagcggcacatgctaacccattccgatgagaaaccatttagctgtgaaatttgtggtaaaaaatttaatcgtatcgatcatttaaatatacataaacataatcattcgacgacaaaaccacataattgtgaggtgtgtcataagggttttatacgtgcggaacatttgcgtcgacataaggaaatggcacacggcacaaaacagacgattgtcaaaacacaattttgtgaaatttgcgaaaaaagttttacaacaccaaaatatttacaaattcatttgcgtacacatgttggtcgcatgtatacatgtaaattttgtcacgaaaaatttgatgtaaaaattaatttaactgaacacttaaaaacacatgccaacgaacgaccatttctatgttctgagtgtggtttacgttttgtacgtaacgattatttagttatacatatgcgacgacataaaggtgaaaaaccatataaatgtaaatattgtaataagggatttccacgggccaccgacttaactgtacacgaacgttatcacaccggtgaaaaaacacatttatgcacaatatgcggtaaaggttttcaacgtgcatacaatttattagttcatacacgtgtacataccggtgaacggccatatcagtgtccacattgtgttaaaagttttgcacaaggtaacgatttaaaggcacacattcgacggcataccggtgaacgatataaatgtgaaatttgtggtgaaggttttatacaaggttaccatttaacacaacataaacgtaCTGTTCATGGTATTGATATGAAATcgcatatacgtagggttgagaaatttataccaaatacattaaatcaaattaataatagtaataatagtaagaataataataataataataataataatagtagtgatagtaatcagcaacagaaaaagaaaaaacaacgaactcagaaaaatgtaatagaaaatttagacaatgctagtgttgatcatggtaatagtgttattgatggtgatgatgatgatgatgatgatgataatgatgaagatgatgataaggatgatgttaataatgatgatgataataataatgatgaagccaatgatgttgatgctaaaaatgatgtagaaataaattgcttgcaattaacaaaacaagaatttgattcacaaccacaagaacaagaaatgattaccaatgaATTAAGTACGGAAATAAAATTAGAACCAAATGTAATTCAAATTGGCAATAATTTGCATCAATTACAGCAACATATGAATTTAACAACACAGAACATAACAATTGTACATGCAATTAATCCAAATCAAGTACTATTATTTCCATCAGATGAATCATCATTAGCAACAACCACACTAACAACAGCACCAACACCATGTTCTTCAGCATCTACAACAACAACGACACACATATTAGATGATCATGAAACAATTTTATCGGTTAATTTACTCCCTTCATAA
Protein Sequence: MNLNNICRTCLKEDVEMKSIFDDENENELPKISLSCMISTCTITTISSIDELPKKICKQCIENLKTSYNFKQTCENSFISLKKMLENNVTKSIEEITLQFEPHIMVDNSSDNLNISNETIKTENINIQLINELKHIEKCTQTVQIGFFPCEICVDKFITEESLKAHRLTHKDNIKCRVCSKVYTRLSHLRSHIVASHPGILFTMPEIICNLCDKKFTRHEHHRRHMLVYHDQKIDLQRIAKTKSKCSDEENEDNGDIFDDNDNDEHDDDDDDDDDNNNDNDDHDVDNNNDNNDDDDDNYDTYNDVCDGDNNIVSIIDDDIELNANEANEIVNNTLKYENCNKSYNNENNIVQHLSEQPEIQTSNVTDTKLRTPPTTLTIEIVKTEDLFDINNSYEYFNNENDEEHINNDDCIQINSSDSNVNKIVNNYADNDDNDDDDADKNNVKRKRGRPKKSVKNDERLKLKKAKLFCNICKEKFTSDKDLEKHKKWHDEKINQCTNCLKTFTRATHLKRHMLTHSDEKPFSCEICGKKFNRIDHLNIHKHNHSTTKPHNCEVCHKGFIRAEHLRRHKEMAHGTKQTIVKTQFCEICEKSFTTPKYLQIHLRTHVGRMYTCKFCHEKFDVKINLTEHLKTHANERPFLCSECGLRFVRNDYLVIHMRRHKGEKPYKCKYCNKGFPRATDLTVHERYHTGEKTHLCTICGKGFQRAYNLLVHTRVHTGERPYQCPHCVKSFAQGNDLKAHIRRHTGERYKCEICGEGFIQGYHLTQHKRTVHGIDMKSHIRRVEKFIPNTLNQINNSNNSKNNNNNNNNNSSDSNQQQKKKKQRTQKNVIENLDNASVDHGNSVIDGDDDDDDDDNDEDDDKDDVNNDDDNNNDEANDVDAKNDVEINCLQLTKQEFDSQPQEQEMITNELSTEIKLEPNVIQIGNNLHQLQQHMNLTTQNITIVHAINPNQVLLFPSDESSLATTTLTTAPTPCSSASTTTTTHILDDHETILSVNLLPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -