Pfun006855.1
Basic Information
- Insect
- Penthetria funebris
- Gene Symbol
- -
- Assembly
- GCA_027564355.1
- Location
- JANSTX010054850.1:6276-8866[+]
Transcription Factor Domain
- TF Family
- Nrf1
- Domain
- Nrf1_DNA-bind domain
- PFAM
- PF10491
- TF Group
- Basic Domians group
- Description
- In Drosophila, the erect wing (ewg) protein is required for proper development of the central nervous system and the indirect flight muscles. The fly ewg gene encodes a novel DNA-binding domain that is also found in four genes previously identified in sea urchin, chicken, zebrafish, and human [1]. Nuclear respiratory factor-1 is a transcriptional activator that has been implicated in the nuclear control of respiratory chain expression in vertebrates. The first 26 amino acids of nuclear respiratory factor-1 are required for the binding of dynein light chain. The interaction with dynein light chain is observed for both ewg and Nrf-1, transcription factors that are structurally and functionally similar between humans and Drosophila [2]. The highest level of expression of both ewg and Nrf-1 was found in the central nervous system, somites, first branchial arch, optic vesicle, and otic vesicle. In the mouse Nrf-1 protein, Swiss-Prot:Q8C4C0 there is also an NLS domain at 88-116, and a DNA binding and dimerisation domain at 127-282. Ewg is a site-specific transcriptional activator, and evolutionarily conserved regions of ewg contribute both positively and negatively to transcriptional activity [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.2e-17 9.6e-14 51.5 0.0 106 209 11 109 2 112 0.89 2 6 0.55 4.6e+03 -3.0 0.4 96 133 474 511 461 529 0.56 3 6 0.52 4.3e+03 -3.0 0.2 84 110 531 557 502 565 0.69 4 6 2 1.7e+04 -7.8 9.5 84 118 627 660 615 686 0.59 5 6 2 1.7e+04 -7.7 9.4 88 121 665 698 650 725 0.60 6 6 0.85 7.1e+03 -3.7 4.8 88 131 714 747 695 778 0.49
Sequence Information
- Coding Sequence
- ATGCGACAAATAATTGATGATGACCTTGAGTCCAGACAACAAAATATGGTATCATGTTTACCATTATTATTTGCGGCCGGCTACCCTACATCATTAGATAAAATTACTGAAATACAATTACAAAATTTTATTCCTTTTATGGTACAATGTTCATGTGGTAATATACAAATACAAAATTTTAAAGAATATTCAAAACCTATTTGGTGGCCAGAAGATATGCCATTCACAATTCCATTAGAACCACCAAAGGATAAAATCAATTGGCGTGATAAATTGAAAAAAATTGTTATGATTTGCTATTCATTTCATAAGAGTGATTTTCTGTTAAATTTTTGTGATGATTTAGCAAATTATCAAACAGAAAGTTTAAGATTTATAAATAATTATGATTCAACAACATCACTATTTGATCGACTTAGTAATAAACTATTGGTTACATTTAGAAATGAAAATATGTTGTATGATCAATATATAACAAATAATAAAAAAACATTATTACCTCGTTCACAAGGATCACAAACACATACAGACTGTATTGTAGTTGAACCAGCATTATTTGATATTTATTTATGTGATAATTGTGAGGCAGAATTATATTCTCTTGAAGCTTATAAGgaacatgaaaaaatatgcttaaaagatactgttgatgatgacgatgacgatgatgatgacgatgataataataataataataataagaataataatgatgcggatgatgatgatgatgatgatgatgatgatgtaattttttgtggaactgaaatacttgagcgaaacgatgaaaaacgtaaatttttacaaaatctcaatttaaattgtgtaaaCATTCCAAAAATACTGAAAACACCAATAAAGAATAATACAAAAGAATTGCCATTGGCGTCATCCGTAGAAAAACTTAGACGTTTACCACGTCGCAGTAGAGTTTTATTAGTACTATCAAAATGTCCAAATATACCGATAACATCACCGGCCGGTTTACAATTACTAAAAAGTTCAAAAACATTAATGAGTACCGATTATTTAATGGAACGTTTAGATAGAAATGAACGTTTCTGTCATGCACCATCGTTGGGTGTGAACAGCAGCGGTAGTAGTAATAGACCAAAATTTATGGATAAAAAAATAAATGGATTGATAACGTCAAGTTTTAAAAAGCCACAAGACTATCATTATCATAATTATAAATATCCACGAAAACAATATGCAAATACAAAACGTGATAATTTATTTTTACTATTTAATTCATTTTTATTAAAAAAATGTACGCCAATTATTGTTAAATTAAAAAAACTCACAAATAATGATATAGAAGAGTTTAATATGAAACTGAAATTAAAGCGATTgacagaatgtggtgaaatttcattaaatcgaagatttaatacaaatattgaacagaataatggtaataataataatactaataataataataataataataataataataatattattgctaataataataataataatattgataatagtagtgttagtgttagtaataataataatgctgatcatatttttaataatattagcattagtaataataataataatagtgataacattaatagttcaagtaatatattaaataatgttaatataagaaagaaaactagaaatagtactaatagttctAATAATGATAACAACTCTCAAGCAAATATTGTTGCCGTTATTGATTTGTGTTCATCGGATGAAGAGAGTGAATTAGCTGAATTGTCAATTAAAAAACGTAAAACTATTGGTTGTAATTCAGAATTATCAATTATACCCAATAGTTTACAAAAAACTACACTCCAACCATTACGACTATCTGCGATTTTATTTTCTAATTCAACTAAAGAATTGTCATTAAATcagaaagatcttcaactatcacaattgcatcatcaacagtcacaacaacaatcacaacaacaatcacaatcacaacaacaatcacaactacaacaacaacaacaacaacaacacgcacaattacaacaacacgcacagaaacatcaacatcaaccgcaaccacaacaacatcaacatccaccacaaccacaactgccaccaaaccagcaacaacaacagcagagactcaacaatcaatcagaaatacgattaaatcaacagcaacttcctgaaatgcatcagcatgtaaggcaacagtttaatcaacaacagcagcaacaacaacaacaaccatcaccaactactgtacaatcaacgAACCAACAACAAAATTATAACACTATGAATCTTGCCGGTAAACATCAAAATCAAGAAAATGTTTGTAATTTTCAAAATGGTACAAAAACAAAATCAGTTCCTTGTTTGCCAAATAAAAAATCATCGGTTGAAAAAAAAATTACTAAAATTGTTTCAACAATACAACAAAATTGTATATCTATAGATTTAACATAA
- Protein Sequence
- MRQIIDDDLESRQQNMVSCLPLLFAAGYPTSLDKITEIQLQNFIPFMVQCSCGNIQIQNFKEYSKPIWWPEDMPFTIPLEPPKDKINWRDKLKKIVMICYSFHKSDFLLNFCDDLANYQTESLRFINNYDSTTSLFDRLSNKLLVTFRNENMLYDQYITNNKKTLLPRSQGSQTHTDCIVVEPALFDIYLCDNCEAELYSLEAYKEHEKICLKDTVDDDDDDDDDDDNNNNNNKNNNDADDDDDDDDDDVIFCGTEILERNDEKRKFLQNLNLNCVNIPKILKTPIKNNTKELPLASSVEKLRRLPRRSRVLLVLSKCPNIPITSPAGLQLLKSSKTLMSTDYLMERLDRNERFCHAPSLGVNSSGSSNRPKFMDKKINGLITSSFKKPQDYHYHNYKYPRKQYANTKRDNLFLLFNSFLLKKCTPIIVKLKKLTNNDIEEFNMKLKLKRLTECGEISLNRRFNTNIEQNNGNNNNTNNNNNNNNNNNIIANNNNNNIDNSSVSVSNNNNADHIFNNISISNNNNNSDNINSSSNILNNVNIRKKTRNSTNSSNNDNNSQANIVAVIDLCSSDEESELAELSIKKRKTIGCNSELSIIPNSLQKTTLQPLRLSAILFSNSTKELSLNQKDLQLSQLHHQQSQQQSQQQSQSQQQSQLQQQQQQQHAQLQQHAQKHQHQPQPQQHQHPPQPQLPPNQQQQQQRLNNQSEIRLNQQQLPEMHQHVRQQFNQQQQQQQQQPSPTTVQSTNQQQNYNTMNLAGKHQNQENVCNFQNGTKTKSVPCLPNKKSSVEKKITKIVSTIQQNCISIDLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -