Pnig024716.1
Basic Information
- Insect
- Pentalonia nigronervosa
- Gene Symbol
- SIZ1
- Assembly
- GCA_014851325.1
- Location
- scaffold:3646-5105[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.6 1.6e+03 -0.5 0.1 27 48 128 151 127 153 0.75 2 2 1.5e-22 3.9e-19 68.7 4.7 4 49 212 257 210 258 0.96
Sequence Information
- Coding Sequence
- ATGGCTCAACCACCAAATCGAAAGAAAGTTAATGTCCATATTATCCACAGAGCACCCAAGCCAATATGCAATGTAGTATTCAAACAAATACCATTTCACATCAATAAACATAGAATCGTTGGACCAATGGCTGTTTATTGTGTCTTACAAGTGAACCCTAATATGGCACAACCACTAGTACAAACTAAATTTGAGTTTGAGTTTAAATTACCGGATGTAATTCAATCAATGATAAAAGATACAACAAAACAACACCATTTACAGCTCCGATTTGGAGAACAGTTGCCAGGTATGAATGAGTTAGCAGAAGGTTTACCAGGACCCATATACATTTCTATCGATACGTACAATTCATCCGCTATCACAAAGAGCCCTATAAATTTTGATTGCAATTATTTTTTATTATTAAATAATCCAAAAAATACTATTTCAATAATTTGGCCATCATGCAAAAAACCATATTACATGGTGATAGATATCGTAAATACAATCACAATTGAAAATTTGATCGAAAGAATACAAATTGTCAATGATCAATCTTCTGTTACATTAAATACAAGAACTAAGGTCATGGAATTGTTGAAAAATTCTGATACAGAAATTCTTGGTTCAGCATCTCAAAAGTTCATTTTGTTGTGTCCAATAACCAAATTAAGAATGAAATTACCGTCAAGATCTAAAAATTGTAACCATTTACAATGTTTTGATCTACATGCATTTTTTTCATTGAATAAGATAAAGCCAACATGGAAATGCCCAATTTGTAAGATACCCATTATGGTTGGTGATTTGGTAACGGATTCGTTCCTTTTGGATATTATCAATAGTGAAACTCTTCCTATAAATTGCTCCGAAATAACATTATATGCTAATGGCAACTGGGAACCAACTATAGAACCAAAGATTGAAATTCTTGAAGATGATCAGACTGAATCTGATAATAACACTTTTACTGTTGACTTGGGTAATTCAAACGATGAAAATAATTATGATGAAAAGCCTATACTAACAACAACAAATAGTGGGAATCCTGATGACCAAACCCAATGTTAA
- Protein Sequence
- MAQPPNRKKVNVHIIHRAPKPICNVVFKQIPFHINKHRIVGPMAVYCVLQVNPNMAQPLVQTKFEFEFKLPDVIQSMIKDTTKQHHLQLRFGEQLPGMNELAEGLPGPIYISIDTYNSSAITKSPINFDCNYFLLLNNPKNTISIIWPSCKKPYYMVIDIVNTITIENLIERIQIVNDQSSVTLNTRTKVMELLKNSDTEILGSASQKFILLCPITKLRMKLPSRSKNCNHLQCFDLHAFFSLNKIKPTWKCPICKIPIMVGDLVTDSFLLDIINSETLPINCSEITLYANGNWEPTIEPKIEILEDDQTESDNNTFTVDLGNSNDENNYDEKPILTTTNSGNPDDQTQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -