Pnig026237.1
Basic Information
- Insect
- Pentalonia nigronervosa
- Gene Symbol
- GATA18
- Assembly
- GCA_014851325.1
- Location
- scaffold:2202-3251[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.085 3.3e+02 1.6 0.1 18 30 66 76 62 80 0.77 2 2 9.2e-21 3.6e-17 62.2 4.4 1 35 208 242 208 243 0.96
Sequence Information
- Coding Sequence
- ATGAGCGGGTTAATTAACATCTTTTACCCATACGATGTTCCTGACTATGCGGGCTATCCCTATGACGTCCCGGACTATGCAGGATCCTATCCATATGACGTTCCAGATTACGCTGCTCAGTGCAGCGCTGTTATCACAAGTTTGTACAAAAAAGCAGGCTTCATGATGCAGACTCCGTACACTACTTCAACGCAGGGGCAATATTGTCATTCTTGTGGAATGTTCCACCACCATAGCCAAAGCTGCTGCTACAACAACAACAACAACTCCAACGCCGGTTCTTACTCGATGGTCTTCTCCATGCAAAACGGTGGCGTTTTCGAGCAGAACGGTGAGGACTATCATCACTCTTCCTCCCTCGTTGACTGCACTCTCTCTCTTGGAACTCCTTCTACGAGGCTTTGTGAGGAAGATGAGAAACGTAGACGCTCTACTTCATCTGGTGCTTCTTCTTGCATCTCCAACTTTTGGGACTTGATTCACACCAAAAACAACAACTCCAAAACGGCACCGTACAATAACGTTCCTTCTTTCTCCGCTAACAAGCCAAGTCGCGGTTGTTCCGGTGGTGGTGGTGGCGGAGGAGGCGGTGGCGGAGGTGACTCTCTTCTCGCTAGACGCTGTGCCAACTGTGACACTACTTCTACTCCACTATGGAGGAATGGTCCTAGAGGCCCTAAGTCCCTATGCAACGCATGCGGCATTCGTTTCAAGAAGGAAGAGAGAAGAACTACTGCGGCTACAGGAAACACCGTCGTCGGAGCTGCACCGGTTCAAACCGACCAGTACGGGCATCACAACTCTGGCTACAATAATTACCATGCTGCCACTAATAACAACAATAATAATGGTACTCCGTGGGCTCATCACCACTCGACGCAGAGGGTTCCGTGTAATTATCCGGCAAATGAGATCAGGTTCATGGATGATTACGGCAGTGGAGTAGCAAACAACGTTGAATCCGACGGTGCTCACGGCGGTGTTCCGTTCCTTTCTTGGAGGCTTAATGTAGCGGATAGGGCAAGTCTTGTCCATGACTTTACCAGATGA
- Protein Sequence
- MSGLINIFYPYDVPDYAGYPYDVPDYAGSYPYDVPDYAAQCSAVITSLYKKAGFMMQTPYTTSTQGQYCHSCGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSSSLVDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNFWDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHSTQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVADRASLVHDFTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -