Basic Information

Insect: Pentalonia nigronervosa
Gene Symbol: zfh1
Assembly: GCA_014851325.1
Location: scaffold:17341-42740[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.075 8.7 7.6 0.2 2 20 71 88 70 89 0.94

2 7 0.024 2.7 9.2 0.1 3 23 116 136 114 136 0.94

3 7 1.2e-05 0.0014 19.5 0.6 2 23 143 164 142 164 0.97

4 7 8.4e-07 9.7e-05 23.2 4.6 1 23 173 195 173 195 0.99

5 7 3.8e-05 0.0044 18.0 1.5 1 21 201 221 201 222 0.95

6 7 0.00017 0.019 15.9 9.2 1 23 887 909 887 909 0.98

7 7 0.011 1.3 10.2 4.4 1 21 915 935 915 936 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.075	8.7	7.6	0.2	2	20	71	88	70	89	0.94
2	7	0.024	2.7	9.2	0.1	3	23	116	136	114	136	0.94
3	7	1.2e-05	0.0014	19.5	0.6	2	23	143	164	142	164	0.97
4	7	8.4e-07	9.7e-05	23.2	4.6	1	23	173	195	173	195	0.99
5	7	3.8e-05	0.0044	18.0	1.5	1	21	201	221	201	222	0.95
6	7	0.00017	0.019	15.9	9.2	1	23	887	909	887	909	0.98
7	7	0.011	1.3	10.2	4.4	1	21	915	935	915	936	0.96

Sequence Information

Coding Sequence: ATGTATTCCCCCGGAGCTGCCGCCGCCGCCGCCGCAGCAGCCGCAGCGGCCAACGGATCACCTTTCGACAGCAGCTACTCGTACCGCCTGTGGTGTTTGGCCAACGTGTGGAGCGGCAATCTTCCGTTTCCCGGGATGAGTCTAGAGGGCCTTCTCAAGGACTATCAGGACCTACACCACCAGCAACAACAGCAACAGCAACATTTACAGTACTGCCCGTTTTGTCGGGAATCGTTTGACTCGGGATCGCTAAAGGAACACTTGGACGGCGGATGCCGAGCCCGGCCGCCTTCGTCGCAACCGTCGCCGCCCCCAACCACGGTTGCAGTCGCCGGCCAATATGGGTGCTTGCAGTGCAATGCCGCTTTTGGCAACCGCGATCTGCTCGAGAAACACGAACTGCTCCACTCGCCCAACGCCCAAGTGTCCTGCAAGGTGTGCAACAAGACGTTTGCCAACGTTTACCGCCTCCAGAGGCACATGATAAGCCACGACGAGAGTGCGGTACTGCGCAAGTTCAAATGTCCCGAGTGCGAAAAGGCGTTCAAGTTCAAACATCATCTCAAGGAACACATTCGCATCCACAGCGGAGAAAAACCGTTTGAATGCTCCAACTGCGGTAAGCGGTTCTCGCATTCCGGATCGTATTCTAGTCACATGACTTCCAAGAAGTGTTTGATCATAAATCTAAAAATGGGAGGTCGCGGGTCGCAGGCTAACAACCGAAACGCTGCTCATCATCAACCGAACAACGGTTTTCCGGGCAAGCGTCCAGTTCCTAATAACAACAACATAACCAACAACAACAGCAGCAACCACAACAACAACAGCATCGGCGCCGGCGGCAATGCGTTCTCGCCTCTGCTGCCGTCGTCGGTGTCCAAGTACGACATGCAAGTGGTGCAGCCGAGCCCAGCACAGGCGCAATCGCTTACACAACAGTCGTTCTATCACACGCAACCGAAAGCCACCGCGGCAGCCATCTACTTCCCAGGACTGTTCAACACTCAGAGCAAGTTCAACATACACGATTTGCTGCAGCCGTCGTTGCAGATACAGTCGGCGATGGGCAAGCAAGATCATCAACAACAACAACAACAGCAGCAAGAACAGGAACAGGAACAAGAACAAGAACAAGACGACTGCTGTAGTGGCGACGGCAAGAACAAGACGACAGACGAAGAAGACCGCAATAATAAGGAGCAAGAGAGTGGCGGCGACGATTTCAACGAGGACGAGGACGAAGACGACGACAAGTACGACAACGTGATCGATGTAGTGAGCGTGGTAAAGAAGGAACGCGAAGACGGCGGTGCGGACGAGGACGCTGCCGGCGAAGCGGACGCGGCGGTCAAGAAACTCTTGGAGACGGTAAACGTATCGGCGGTCACCAAGCAGCTGATGATGGCCAACGCCGCGGCTGCCGCAGCGGCCGCCCTGCACCACCAGCAGCCACTGTCCTGCGGCTCGTCGGGCGGTTGCCCTAGCGTGACGAGCGACTCACCGCCGTACCACCACGGCTACAACTTGTATCCCAATCACAACAACCACCACCATCACCACCACCTCCTCAACCACCACAGAACAGAAGGTCAGGCGGGCAAAGCGGCGGACTACTCGGCGGGCTCCGGTTCCGGGGCCTGCAAGACGACCATCAACAACAACAACATAAACAACGGTTACGACGCGGGCAGCGACTGTTACACGGACGACGAGCACAGACCGTGCACCACCGAAGAGGAAGACTCCGTGGACCAGGACGGCCGCAAGATACGCGTCCGGTCGCAGATAGCCGACGACCAGTTGGCTGTGCTGAAGGAGTGCTACGCGGCCAACCCGCGGCCGAAGCGCGAGGAGTTGAGCCGGATCGCCGACCGAATAGGCTTCAACGTGCGCGTCGTCCAAGTGTGGTTCCAGAACAACCGCGCCCGGGACAGGCGCGAGGGCCGCCTGGTGCACATGCCGTACTCGCCCGCGTCCGCGTCCGCGGCCGCTCACGCCGCAGCCGCCCCGAGTGTGGTCGAACAGCCGCTCGACCTGTCCACGAAGCGGGGCCGCCGCGGCGACGGCAAAGACGGCGGCGCCGTCGACGACGCGTGCGACGACGTCACGCTGTACAACAAGTGCACCGTACAGTTCAAGTGTTGGACCGCCAACAACCGGGACGACCGCAGTTCGTCGCCGCCCGCGTCCGCGCTGCAACCGCATTGCCGCAAGACGTTCCTGGGAGGCGCGTACCCGCCGCCGTCGCCCGCCTGCGCGGCGCCGCCCCCGCCGCCGCCTTCGTCACACCAGCACCATCCCGCGTCCCATTCGCCCATACCGGCCGTCGCGCTCCGGCACAACGGCAGCTTGAGCCCTGCGTCCGAGAAACGTTCGTGGAAGAGAGAATACGGAGACTGGAGCGACATGACGGACGAGGCCGAAGACTCGGGATGCACGTCCCAAGACCCGGACGACGCGGTGGTGTCGACCAGAGGCGGAGCAGGCGTCCTGCACAACAACAACAACAACAACAACAACAACAACAACAACAATAACCACAACAGCCACAACAACAACACCAGTAACGGCTCAACGGCGGCCGCAGTCGGTTTGCCTAGCAAAAAATCCAAACCGTCATCCGTGGAAACGGCCGAAATACCAGATCAAAGACCGCACAAGTGCGACGTTTGCCCAAAAGCATTCAAACACAAACACCATCTGACCGAGCACAAGAGGCTGCACAGCGGCGAGAAGCCGTTTCAATGTTCTAAGTGCATGAAACGATTCTCGCATTCGGGTTCGTACAGCCAGCACATGAACCACCGGTTCTCGTACTGCAAACCATACAGAGAATAA
Protein Sequence: MYSPGAAAAAAAAAAAANGSPFDSSYSYRLWCLANVWSGNLPFPGMSLEGLLKDYQDLHHQQQQQQQHLQYCPFCRESFDSGSLKEHLDGGCRARPPSSQPSPPPTTVAVAGQYGCLQCNAAFGNRDLLEKHELLHSPNAQVSCKVCNKTFANVYRLQRHMISHDESAVLRKFKCPECEKAFKFKHHLKEHIRIHSGEKPFECSNCGKRFSHSGSYSSHMTSKKCLIINLKMGGRGSQANNRNAAHHQPNNGFPGKRPVPNNNNITNNNSSNHNNNSIGAGGNAFSPLLPSSVSKYDMQVVQPSPAQAQSLTQQSFYHTQPKATAAAIYFPGLFNTQSKFNIHDLLQPSLQIQSAMGKQDHQQQQQQQQEQEQEQEQEQDDCCSGDGKNKTTDEEDRNNKEQESGGDDFNEDEDEDDDKYDNVIDVVSVVKKEREDGGADEDAAGEADAAVKKLLETVNVSAVTKQLMMANAAAAAAAALHHQQPLSCGSSGGCPSVTSDSPPYHHGYNLYPNHNNHHHHHHLLNHHRTEGQAGKAADYSAGSGSGACKTTINNNNINNGYDAGSDCYTDDEHRPCTTEEEDSVDQDGRKIRVRSQIADDQLAVLKECYAANPRPKREELSRIADRIGFNVRVVQVWFQNNRARDRREGRLVHMPYSPASASAAAHAAAAPSVVEQPLDLSTKRGRRGDGKDGGAVDDACDDVTLYNKCTVQFKCWTANNRDDRSSSPPASALQPHCRKTFLGGAYPPPSPACAAPPPPPPSSHQHHPASHSPIPAVALRHNGSLSPASEKRSWKREYGDWSDMTDEAEDSGCTSQDPDDAVVSTRGGAGVLHNNNNNNNNNNNNNNHNSHNNNTSNGSTAAAVGLPSKKSKPSSVETAEIPDQRPHKCDVCPKAFKHKHHLTEHKRLHSGEKPFQCSKCMKRFSHSGSYSQHMNHRFSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00018912;
90% Identity: iTF_01031839;
80% Identity: iTF_01167496;