Basic Information

Insect: Pentalonia nigronervosa
Gene Symbol: Hivep2
Assembly: GCA_014851325.1
Location: scaffold:74475-100747[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00031 0.036 15.1 0.4 2 23 28 50 27 50 0.97

2 11 0.071 8.1 7.7 0.5 1 23 182 205 182 205 0.92

3 11 0.0011 0.13 13.3 0.6 1 23 213 235 213 235 0.97

4 11 0.00011 0.013 16.5 3.3 1 23 241 264 241 264 0.98

5 11 0.013 1.5 10.0 2.9 1 23 533 556 533 556 0.95

6 11 0.002 0.23 12.5 0.5 3 23 746 766 745 766 0.98

7 11 2e-05 0.0023 18.9 3.1 1 23 772 795 772 795 0.97

8 11 0.0045 0.52 11.4 0.9 1 23 822 846 822 846 0.97

9 11 0.9 1e+02 4.2 0.5 1 23 925 948 925 948 0.90

10 11 0.00073 0.084 13.9 2.2 3 23 982 1002 981 1002 0.97

11 11 0.054 6.2 8.0 3.2 1 23 1008 1031 1008 1031 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00031	0.036	15.1	0.4	2	23	28	50	27	50	0.97
2	11	0.071	8.1	7.7	0.5	1	23	182	205	182	205	0.92
3	11	0.0011	0.13	13.3	0.6	1	23	213	235	213	235	0.97
4	11	0.00011	0.013	16.5	3.3	1	23	241	264	241	264	0.98
5	11	0.013	1.5	10.0	2.9	1	23	533	556	533	556	0.95
6	11	0.002	0.23	12.5	0.5	3	23	746	766	745	766	0.98
7	11	2e-05	0.0023	18.9	3.1	1	23	772	795	772	795	0.97
8	11	0.0045	0.52	11.4	0.9	1	23	822	846	822	846	0.97
9	11	0.9	1e+02	4.2	0.5	1	23	925	948	925	948	0.90
10	11	0.00073	0.084	13.9	2.2	3	23	982	1002	981	1002	0.97
11	11	0.054	6.2	8.0	3.2	1	23	1008	1031	1008	1031	0.95

Sequence Information

Coding Sequence: ATGTCATCGGAGATGTTGCGCGTAGACAATCTGCGACAAAGATTGTTCTGCAATTCCGTGTTGGACACGAAAAGGGAAAGCCGGTGTCCTGTGTGTAACGCCATGTTTTCGACCACGTACAGTATGCGTCTGCACTTGCAAACTGTCCACATGGACTTGAAACCACAAAACCTAACCTCCAAAACGTTTTACCGCGAGTTCAACAATAACAACAGCATAAATAACAACAACAATAACAGCAGTAACAACAACAACAACAACAATAACAACAACCACACGGCCTTCGTCGCAAAGTCACCGGCAAAAACGGCATCGTTCAACAACAGCCCGGAACTCGCACACGTTACACCCGTCAAGTCTTCGTACAACGGTGACTCAACGTGCAGCACGGACTTAAGCGACGGATATCCGTCGGACAAGGACTCATATTTTGGCGGCTCGCCCAAGGACGAAATCCCGCTGTCCGTGGCCGGTGGCGGTTTTATGTCACACTCGCCGGCCAACAAGAGGAGCAGCAACGGTCACATGAAGACCAAGCGCACGTATACGTGCAGGCTGTGCTCGACCGTGTTCGGCAACCTGCGGGCGCTCAAGGGCCACAACTCGTCCAGCCACAACAAATCCACCAACGGTATGTACGCGTGCAATATATGCGAGTTCGCCAGCACTGAAAAGGCGTCGCTGAACCATCACATGAAGGGCCACACGGGCGAGACGCCGTACGTCTGCAAAAAGTGTTCGTACGCGTTCACCACGAAGGCCAACTGCGAACGGCACCTGCGCACCATACATAAGGCGTCCAACGCCGAGGTGAAGGCGTCCATACTGTTCAAGAACGAAGAGAAACCGGCTGGGTCGGTGCAGTCGGCCAACGACGAAGCGGTCGCCGACAAGAGCGAAGAACTGTACCACCATCTGCGCCTGCGGCACTACAATCAGACGACGACGACGACGACGACGGACTATTCCCAGTATGAATCGTCCGGGCAAAAAAGCTCGGAGGACGACGATGACGAGTACGACGAGCCGCTGGACCTGAGCATGAAGCGTTTCAAACAAGAGTTCGACTGTGAACCGCAGGATTTGTCCATCAACGGTAAGAGGTCGTCGTCGTCGTCGTCGTCGTTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGGTGACCACACGGACGAGGATGACGTCAAACCGACGGCACCGATGGCATTCCGCGAGCAATTCGTGCCGCACGCCCCGTCCGGCTTCATGGATCTGTCGTTACCCACGCCTTTGCACGCGTATTTCCTTAATGAGCACCGTATGTTCTTCAATGGCATGTACCCGGCCGCGGAACGCATGCTGCCGATACCACTCACCGTCGACATGATCCGCGCAATGCGGCAAATGAACGATCCGGCGGCAGTCCCGGCCCAAGAGCCGTCCGACCCCGTCGTCCCACCGAAGCCAGAGACGCCAGAGCCCGCGGCCGTGCCGCCTCCGCCGCCGGCCCCGCCGTCTGTGGACGTTTCGCAAAAACCAAAGGACGCCAACGGATTGCGGTTGGTGATGAAAAATGGCATTCTGGTGCCCAAACAGAGACGATTCAGGACGGACAGGCCGCATGTCTGCGAGACGTGCAAACGGGCGTTCACGTTGAAGTCGAACCGCGACCGGCACGTCAAAAATCAACACCCGACCGATTGGCACAAGAAACCTAGGTCGTTGTCGTCAAAGTCGGAACCGCAGTTCTCGGCCGTCAAACAAGAACAGCATGACACGTCGCCGATATCAGATCAAGTAAAAATGGCACTGTCGCTGAAATGCCGGCCGCCGGAACAGCTGTTGCGGACCGAAGACGAAGTAGACGATGACGAAGACGACGATGACGTAGTGGAGGAGGAGGACAAACTCGTCATAGTGGAAGACGGCGTAGAGCACAACAAGCTCGCCGCCGGTGTCAAGGAAAAGTGCGCAGAGGTGGTTAAAGAGGAGTCCGCCGATCTGGTCAGCGTGTCTAGGCTGCTGGACAACGCTTCGCATCAGACATTTCCGCAGTTCAATAGATCCGACGAGGACCACAACGAGGTGACCAGCAGCGAAGAAGAGCACAGCGAGGCCGCTAGCTATTCCGAAAACGACGGTTCCAGTATTAACGCCGTCAATAACAACATCGACATAAATTTCAACACGGACAAGGACGAAAACCGGGAGAAGCGGAAGAAGGTGAGCGCGTACGCGGCCGCGCCCAACAGAGTGTTGTGCCCGTTCTGTTACCTGTCGTTCCCGTGGACTTCATCCCTGAAACGGCACATCCGCACGCACACGGGCGAAAAACCGTACCAGTGCAAACACTGCCCGTTGTCGTTCTCGACCAAGTCGAACCGCGACCGGCACATCCTGCGCCTGCACTGCACGCCGCCCAGCAAGTCGGCCGCGTCGTCCGACAACGAAACGACCGCCGCGGCGCCGGCCGACGCCAAGAGCGCGTACAAGTGCACGTCGTGCCCGAACGTGACGTTTTCCAAGCGCAAGAACCTGATCAGCCACATAAACCGGGTGCACTTTGACAAGAACGGAAGCGGCGGCGCCGGCGAGGACGACGAACGGGGCGGCGATGGTACCGAGGACGACGGCGGCGAATCGGAACGCGACTATTCGACGATGGCCATGTACAACGGGTGGTGCGGAAACAACCCGGCCGCGGCCACCGCCACGGCCAGCACCACTACACCGTCCGCAGCAGCAGCTGCCACCGCCGTCACACCGTCCAACGCGGTCTCCGGATCCGAACCGTGTTTCAAGTGTCACCTGTGTGACAGCAGCTACCTGGACAGACAGGGTGCTCTGGACCACATTCGGATCGACCACGCCGAGTGTTACGAGATACTGGTGTCGCAGGGGGCCATGGACAACGACCACGACTCGTCGGCCATCAAACAAGACGACGTAGAAAACAGAAAGGTCCTGTGCGCGTTCTGCCTGCATCGTTTCTACTCGGCCGAGGACCTGCGCCGACACATGCGCACCCACACCAAGGAACAGCCGTTTGCGTGCCTGTCGTGCAAGCGCCGGTTCACGCTCAAGCACAGCATGGTCCGGCACATAGCCAAAAAGCACGGCGGCTGCCAGGACCAGCAGTACGGAGGCGGCGGCGGCGGCGGCGGAACTGGAGGCGGCGGCGGCGGCGGCGGTAGTAGCGACCACGAACGGAGGTCCGCCAGTCCGCCGAGCACGCCCCCGCCGGCGGGTCCGGCCACCGGTTACGAGGACTGCTGCGCCAGTCGGACGGACACGGGCCTGATCGGCACGCTGCTCGGCATCCGCGACAGCACAGTCATCGACCAGATGCTGCAGACAAAGTCGCCCGAGGACGCGGCCAAAATGTTGGGGATCAAGAGCAGCAGCGACTAG
Protein Sequence: MSSEMLRVDNLRQRLFCNSVLDTKRESRCPVCNAMFSTTYSMRLHLQTVHMDLKPQNLTSKTFYREFNNNNSINNNNNNSSNNNNNNNNNNHTAFVAKSPAKTASFNNSPELAHVTPVKSSYNGDSTCSTDLSDGYPSDKDSYFGGSPKDEIPLSVAGGGFMSHSPANKRSSNGHMKTKRTYTCRLCSTVFGNLRALKGHNSSSHNKSTNGMYACNICEFASTEKASLNHHMKGHTGETPYVCKKCSYAFTTKANCERHLRTIHKASNAEVKASILFKNEEKPAGSVQSANDEAVADKSEELYHHLRLRHYNQTTTTTTTDYSQYESSGQKSSEDDDDEYDEPLDLSMKRFKQEFDCEPQDLSINGKRSSSSSSSFAAAAAAAAAGDHTDEDDVKPTAPMAFREQFVPHAPSGFMDLSLPTPLHAYFLNEHRMFFNGMYPAAERMLPIPLTVDMIRAMRQMNDPAAVPAQEPSDPVVPPKPETPEPAAVPPPPPAPPSVDVSQKPKDANGLRLVMKNGILVPKQRRFRTDRPHVCETCKRAFTLKSNRDRHVKNQHPTDWHKKPRSLSSKSEPQFSAVKQEQHDTSPISDQVKMALSLKCRPPEQLLRTEDEVDDDEDDDDVVEEEDKLVIVEDGVEHNKLAAGVKEKCAEVVKEESADLVSVSRLLDNASHQTFPQFNRSDEDHNEVTSSEEEHSEAASYSENDGSSINAVNNNIDINFNTDKDENREKRKKVSAYAAAPNRVLCPFCYLSFPWTSSLKRHIRTHTGEKPYQCKHCPLSFSTKSNRDRHILRLHCTPPSKSAASSDNETTAAAPADAKSAYKCTSCPNVTFSKRKNLISHINRVHFDKNGSGGAGEDDERGGDGTEDDGGESERDYSTMAMYNGWCGNNPAAATATASTTTPSAAAAATAVTPSNAVSGSEPCFKCHLCDSSYLDRQGALDHIRIDHAECYEILVSQGAMDNDHDSSAIKQDDVENRKVLCAFCLHRFYSAEDLRRHMRTHTKEQPFACLSCKRRFTLKHSMVRHIAKKHGGCQDQQYGGGGGGGGTGGGGGGGGSSDHERRSASPPSTPPPAGPATGYEDCCASRTDTGLIGTLLGIRDSTVIDQMLQTKSPEDAAKMLGIKSSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00135687;
90% Identity: iTF_00134839;
80% Identity: -