Pnig025312.1
Basic Information
- Insect
- Pentalonia nigronervosa
- Gene Symbol
- arid3a
- Assembly
- GCA_014851325.1
- Location
- scaffold:1385-69860[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-27 3.2e-23 82.5 0.0 2 89 244 329 243 329 0.96 2 2 1.2 4e+03 -1.2 0.8 67 86 410 430 399 431 0.63
Sequence Information
- Coding Sequence
- ATGCTGAATAGTGAACCGTCGTCTGAGTTGGACAAACAACAGCGCAACGCACAGACAGAACCAGTGAAGATGGCCGCCACCGAAGCCGGAAGTCCGAGACGACTGGGTCTCAATCTCAACCTGAGCGTACAACCACACGCGGTCGCATATCACTGGCCACACTCGACAGTGGCCGAAGACACGTCACCATCCCGGTCCAAGGGCTGCACGGACGATGATGATGACGACGACGAAGACGATCGTGACATGGATGACCGTGATATGGACGACGATGACATCATGATGGACTGCCGGCAGGACGAGGATTGTTCACCCGAGGACGAGCAAGACATTTTGGAAATGCAGCGTGAGGAACGCGAAACCCTCAATCAGCTTGCCAGACAATTGGCGTCCGGTTCCCGGTTGATAACTCCCATGCTCCAGCATCTCGTGTACCAACACCCCGGACTCTCCGTACAACCGTCGCAGATGCATCAGCAGCAACTGCAACTACAGTTACAGCAGCCGTCCGCCGTGGCCGTGTCTTTGACAACGGCCGCGCTCAGCAGACACGCGACGGCGGCCGCTGCTGACCTGTCGCCAAAGTCCAGCCACTCAGGTGACGTGCCGATGTCCGGCGGTCGTCCTGCCGACGTCCAGTCGCCGTCCGCGGCCCGCAATAACGAGGCCCAGTCATGGACGTTCGAGGAACAGTTCCGACAGTTGTACTCGGCGGGCAATGAATCCGACAGACGGACTTTTCTAGACTCGCTGTTCAGTTTTATGCAAGAACAAGGAACTCCAATTAGTCGTCTACCTATCATGGCCAAACGCGTGTTGGATCTGTACACCCTATACAAGTTGGTCGTCCAAAGAGGCGGAATCGTTGCGGTCATCACCAAGAAGTTGTGGCAAGAGATCATCCGAGGCCTGGGACTACCTCCTTCTATAACGAGTGCCGCGTTTACATTACGCACACAATACGTCAAATACTTGTACGCGTACGAGTCGCGGATGAACCAGTTCAGTACGTTGGACGAGCTGAACATGGCGATAGCGGGCAACCGGCGCGAGGGCCGGCGGAACAAGTCGCTCATGTATTCGGACATGCCGCCGCCACCGCCCGGACACCCACACCACCATCACCACAGCCATCAACAACAAGTGAACGGTGGCCACCCGCACTCCATGATGGGTGGAGGTGCCCCGCCGCAGCCGTCGTCACAACAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGTCGTCGTCCCATCACCATCACCACTACGCCAACGTGCTGGCCGCCGAGGATAGGTTTCGGCACCTGGCCGCCGCCATCATCGACAATCACCATCACGCGGCCGCCGCTGCGGCCGCCGCCGCGGCCGGCGTCGGTGTCGACCACCCCAGGCTGCGGATGCAATCGTGCAGTCCACCGCAGCATCAGCAAAAATTGCAACTGCAACCGGAAGGCAAGACGTCCACCGTCGCGTTGCACCAGACTCCCCGATCGCCGGCCGCCGCCGGACTTCCACCACCGCCACCCATGCCGCCGTCGTCGTTGTTCAACGGCCACCAGCCGCCGTCGTACCAACACCTCCATCAACAGCAGCAACAGCAACATCAGTCCAACGCCGTCCAGTCCACCAACGAGCAGACAAACAAACAGAGAGGTTAG
- Protein Sequence
- MLNSEPSSELDKQQRNAQTEPVKMAATEAGSPRRLGLNLNLSVQPHAVAYHWPHSTVAEDTSPSRSKGCTDDDDDDDEDDRDMDDRDMDDDDIMMDCRQDEDCSPEDEQDILEMQREERETLNQLARQLASGSRLITPMLQHLVYQHPGLSVQPSQMHQQQLQLQLQQPSAVAVSLTTAALSRHATAAAADLSPKSSHSGDVPMSGGRPADVQSPSAARNNEAQSWTFEEQFRQLYSAGNESDRRTFLDSLFSFMQEQGTPISRLPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESRMNQFSTLDELNMAIAGNRREGRRNKSLMYSDMPPPPPGHPHHHHHSHQQQVNGGHPHSMMGGGAPPQPSSQQQQQQQQQQQQQQQSSSHHHHHYANVLAAEDRFRHLAAAIIDNHHHAAAAAAAAAAGVGVDHPRLRMQSCSPPQHQQKLQLQPEGKTSTVALHQTPRSPAAAGLPPPPPMPPSSLFNGHQPPSYQHLHQQQQQQHQSNAVQSTNEQTNKQRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018792;
- 90% Identity
- iTF_00018792;
- 80% Identity
- -