Pnig014331.1
Basic Information
- Insect
- Pentalonia nigronervosa
- Gene Symbol
- Xbp1
- Assembly
- GCA_014851325.1
- Location
- scaffold:87877-91514[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-13 3.8e-10 40.2 7.7 1 64 55 118 55 119 0.95 2 2 0.081 1.1e+02 3.5 1.1 39 56 107 124 105 126 0.80
Sequence Information
- Coding Sequence
- ATGGCGCCCAACATTATCCGGCCCAGTCAAATGTTGATATTCAACTCGGCCATGTGCTACGTGGAACAGCGGCAGCACACGGCCGTCGGTAACGTGGGCAGTGGATCGTCGATGTCGCCGAAATCGCCGCCGACCAAGCGGACGTACGTGAAAAACATCTCGCCCGAGGAGAAAATATTGCGCAAGAAATTACGAAATAGAGAAGCAGCACAGTTATCAAGAGATAAAAAGAAAGCACAATTCACTATTCTGTCAGGAATGGTTCATGGTTTAAGAAAAGAGAACGTACATTTAAGAGAAGAAATAGAAACTTTACGAGCCAACCAAGAGCAGTTAATCACTGAAAATGAAAGGTTACGAGAACAACTTTCTACCGAGTCATCCATACCAAAATCAATAACACCCTCTGCAGAAGGGCAAACTGAATCGAACATCTTGTTTGATGCTCTGTTATCAGATTCTGTTCCCATTACTGATCATTCCATCTTACACGATCTCAAACTTCCAGAGGATGATGACGATATGGACTGGCTTGACAACAATGTATCAAAACGTTTGGAGAAAATTGCTGATGAACTACTTGGCGAAAGTTTCCTTAATGAATGTTGTCTTGATGAAATGGTGGGGAGCACATCAGAAGTCATGGAACCCAGTCAAAATATTAATTTACCCAATACAGACATAATAGTAGATGATGATTCGCTATTCATGCTAAACACAGACATAGATACAGATACAGTTAAGATTCCAACTGAAGAAATGCACTTATTGGCACCAGATGTGGTTGTTAAATCTGAAATTGCAGAACATTCTGAAGACGAAAGTAACTCTTTGGAACGTTTTATTATCGTAGAGGAAGCTATTGAAGAAGTAACTACAACTTATGATGAACATATTCTTGAAGTATGTGAAGAAGATGATATGGACACAGAACATTATGAAGATATTGGTTATGAATCGCTTAGCTCCCCTGAATATGATTACAGAACATGTTATAGTACACCCCCAATATCAACAGATTTATTTTATAAAAACAGTACCTATAATTAA
- Protein Sequence
- MAPNIIRPSQMLIFNSAMCYVEQRQHTAVGNVGSGSSMSPKSPPTKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFTILSGMVHGLRKENVHLREEIETLRANQEQLITENERLREQLSTESSIPKSITPSAEGQTESNILFDALLSDSVPITDHSILHDLKLPEDDDDMDWLDNNVSKRLEKIADELLGESFLNECCLDEMVGSTSEVMEPSQNINLPNTDIIVDDDSLFMLNTDIDTDTVKIPTEEMHLLAPDVVVKSEIAEHSEDESNSLERFIIVEEAIEEVTTTYDEHILEVCEEDDMDTEHYEDIGYESLSSPEYDYRTCYSTPPISTDLFYKNSTYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135064;
- 90% Identity
- -
- 80% Identity
- -