Pmus017792.1
Basic Information
- Insect
- Pelosia muscerda
- Gene Symbol
- Zfy1
- Assembly
- GCA_963691645.1
- Location
- OY829116.1:15608339-15613349[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1 75 4.7 2.0 3 23 253 273 251 273 0.94 2 14 0.91 67 4.9 0.3 3 23 315 336 313 336 0.94 3 14 1.9 1.4e+02 3.9 4.4 1 23 495 517 495 517 0.96 4 14 0.00024 0.018 16.1 2.0 2 23 524 546 523 546 0.92 5 14 1e-05 0.00076 20.4 3.0 1 23 552 574 552 574 0.98 6 14 4.5e-07 3.3e-05 24.7 2.3 1 23 580 602 580 602 0.98 7 14 0.00037 0.027 15.5 1.1 1 23 608 630 608 630 0.98 8 14 9.7e-05 0.0072 17.4 5.1 1 23 636 658 636 658 0.97 9 14 0.69 51 5.2 0.3 3 23 699 718 699 718 0.96 10 14 1.2e-06 9e-05 23.3 0.2 1 23 724 747 724 747 0.98 11 14 0.00042 0.031 15.4 2.5 1 23 753 775 753 775 0.97 12 14 0.00036 0.027 15.6 0.0 1 23 781 803 781 803 0.98 13 14 0.00026 0.02 16.0 0.0 2 23 809 830 808 830 0.95 14 14 0.0042 0.31 12.2 0.2 6 23 840 857 840 857 0.99
Sequence Information
- Coding Sequence
- aTGAATAACGTTACTGAACAAGTTTATTTATTGAGTTCTATACAAGCCCAGCAACCAGGACCCGAACCtgtacaaaaacaaaatggaaTGCAGGGTACATCACGCAATCTAGAAAATGTGCAGGATTTTTCAAATGTATGCCGGATATGTGCCACCGTCACACAGCTTGTGGTTCCTATATTTGCGGGAGAAGGTCTGGAACATCAACTGGCCGACAAAATACACAAACATTTACCAGTTAAGGTGGCAGAGACTGACCAGTTACCCCTAGTGGTATGCTATCAGTGTGTCAGCACACTGATGGCGTGGCACGAGCTGGTGGAGTGCAGCGTGCAAGCCGACAGGGCACTAAAGGCTAAAATAGGCATGAACGCTCGGACTGAAGATGTTAAAAGGGAGTCTCACACAACAACACAGGCACCCAACATGAAGAATGAAGAGGACTCACAAAGCAAGTCATTTCACATCATGGTGAAAAATATTCTGACCGGTTATCTCCGTCATTTCAAAGTGGAAGAAAATTCCGATATGGAATTTGTTTGCCAGAAATGTATTGAGAAACCTGCACTGGCTACAGTGGAGAGTTTGGCGGATCATTTAAAATATGACCACAGTTCAGATGGCATAGACGAGGCAGCTATACAAACGTTTATCAAGaactatgttacttttgaagAGTCATTAGTTGAAGATTCTGATAGAAGTGACCAAGAAGAAATTTCAGAGAAGATTGAAAAACCTTTACCGAATTTATTTTGCCCGTTTTGTACAAATGTGTTTTCGTCACCAACGAGATTGGTTTGTCATCTCAACAAACATTTCGAAGTGTCGATCGAAAACGGCATTATGTGCTGCGATATCTTGTATGAAGACAAGAAAACTTTCGTCGAACATCTGCAGGAAGCCCACGTTGAAAGAAAGATAGAAAGTTTGGAAAAAATGTGCAAAACTTGTGGATTCACTGCACTCGACGCTAAGAAATTACAAGAGCACATTAATATTTCGCATCAAAAAAGAGAAGTTACCAAAGGAAAGACGCTACAGAGTCCAAGAAACCAGAAATATATACCGGCGAAAGAAAACACATCTCAACTACCACATAACGACGCACAGCAAGTAGACGAGAGAGTAAAGAACGTTGTTTGTTGCAGGGACGACTCGTACGCACTGGATGTCGCGGACGAGGCCTCAGACCAGTCGGATGATAAACCACTGTCGACATTAACTACCAAAAAGTCCGATAATCTGTACACGAACTTCTACAGAGCCTTAGTCCAATTTAGAAATCATTTCGTCGACGAACACAAAACTGGGGAATCTTACCCTGATTTTACGGACTCGTCCAGTGCGTCAGAAATCGAAGAAAGTAATCCAGATAATTATGATGACTTGACACAGTGTAACATGAGGAAGGATATAATGGACAAGGAGACGAGACTAGAACTTAGTCAAGTGCAAACTAGAATAAACGGCAAAATGTTTTATACGTGTAGGATCTGTAGCAAGAATCTAAGTTCGTCGCATACTTATCTGTTTCATAAGCGAATACATACCGGTGAGAGACCTTGCGTGTGCCACATATGCGGGAAGCAATTCCGAGCGCCGAACGGACTGCAAAGACATCTGACGGAAACGCACGAACGGTTACGAAGATACACTTGCAGTTTATGTCCCAAAAACTTTGCTAACTCACAGAATTTAAAACATCACTTTAGAATACATACCGGCGAGAGGCCGTTCGTATGTACGCAGTGTGGGAAAACGTTCACTCAGAGCGGATCATTGCACGTCCATTTGAAAACGCACACCGAGCAGTTCCCGTACCATTGCGCCGAATGCGGGGCCAAATTCCGCCTACGGTCCGGTCTAGCGCGACACAGGCTCAAGCACACGGGTGAGCGGCCCCACGTGTGCGCGCACTGCGGGAAAGGGTTCCGACAGAGACACGAACTGAACTCCCACACCCTGTCTCACTCCGATTCAAAACCGGCGCACGGGGCGGTAAAAATCGAAAGAGACGAGCCCGATAGTGCCGAAAGGGGAGATCCGCCGCCGATAACGAGCGTGGCCCCCGACGGGCGGAGGACCGCGTGGTGCGACAAGTGCAACAAGAGCGTGGCGGCCGTCTCCTGGCGCCGGCACCTGCGCCTGCACAACGGCGAGAAGCGCTACAGCTGCCACGCGTGCGGCCGCGCCTTCGCCGACAGCGGGAACCTGGCGCGCCACGTGCGGACGCTGCACGCGCGGCAGCGACCGTTCCCCTGCTCGATCTGCTCGAAGACGTTCTCGAGGAAGGCGCACCGCGACGACCACGAGAGGTCGCACTCGGAGCGCAGGGAGTTCGTGTGCGACGTGTGCGGGAAGGCGTCCAAGTCGGGCGCGGCGCTGCGCATGCACGCGCGCACGCACTCCGCCCGCGCGCTGCCGTGCGCGCAGTGCGGCGCCGCCTTCCGCCGCGCCGCCGAGCTGCGCGCGCACCGCGCCGTGCACTCGGGTGAGCGCGCGCACGCCTGCCCCTGCGGCCGCGCCTTCCGCCTGCGCGCACAACTCAACGCGCACGCGCGCACACACGCCGCGCACAGCTAG
- Protein Sequence
- MNNVTEQVYLLSSIQAQQPGPEPVQKQNGMQGTSRNLENVQDFSNVCRICATVTQLVVPIFAGEGLEHQLADKIHKHLPVKVAETDQLPLVVCYQCVSTLMAWHELVECSVQADRALKAKIGMNARTEDVKRESHTTTQAPNMKNEEDSQSKSFHIMVKNILTGYLRHFKVEENSDMEFVCQKCIEKPALATVESLADHLKYDHSSDGIDEAAIQTFIKNYVTFEESLVEDSDRSDQEEISEKIEKPLPNLFCPFCTNVFSSPTRLVCHLNKHFEVSIENGIMCCDILYEDKKTFVEHLQEAHVERKIESLEKMCKTCGFTALDAKKLQEHINISHQKREVTKGKTLQSPRNQKYIPAKENTSQLPHNDAQQVDERVKNVVCCRDDSYALDVADEASDQSDDKPLSTLTTKKSDNLYTNFYRALVQFRNHFVDEHKTGESYPDFTDSSSASEIEESNPDNYDDLTQCNMRKDIMDKETRLELSQVQTRINGKMFYTCRICSKNLSSSHTYLFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHERLRRYTCSLCPKNFANSQNLKHHFRIHTGERPFVCTQCGKTFTQSGSLHVHLKTHTEQFPYHCAECGAKFRLRSGLARHRLKHTGERPHVCAHCGKGFRQRHELNSHTLSHSDSKPAHGAVKIERDEPDSAERGDPPPITSVAPDGRRTAWCDKCNKSVAAVSWRRHLRLHNGEKRYSCHACGRAFADSGNLARHVRTLHARQRPFPCSICSKTFSRKAHRDDHERSHSERREFVCDVCGKASKSGAALRMHARTHSARALPCAQCGAAFRRAAELRAHRAVHSGERAHACPCGRAFRLRAQLNAHARTHAAHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00637967;
- 90% Identity
- -
- 80% Identity
- -