Basic Information

Insect: Pelosia muscerda
Gene Symbol: -
Assembly: GCA_963691645.1
Location: OY829124.1:9191764-9198029[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0021 0.16 13.1 3.5 1 23 22 45 22 45 0.97

2 28 0.0028 0.21 12.8 1.8 2 23 52 73 52 73 0.95

3 28 4.3e-06 0.00032 21.6 0.5 1 23 79 101 79 101 0.98

4 28 1.7e-05 0.0012 19.8 1.4 1 23 107 129 107 129 0.96

5 28 0.0044 0.33 12.1 0.4 1 15 135 149 135 152 0.90

6 28 9.2e-05 0.0068 17.4 1.4 1 23 190 213 190 213 0.96

7 28 3.5 2.6e+02 3.0 1.7 4 23 229 249 229 249 0.93

8 28 0.0003 0.022 15.8 1.1 1 23 254 277 254 277 0.97

9 28 0.00015 0.011 16.7 0.6 2 23 284 305 283 305 0.95

10 28 5.2e-06 0.00039 21.3 1.4 1 23 311 333 311 333 0.98

11 28 3.2e-06 0.00024 22.0 0.4 1 23 339 361 339 361 0.96

12 28 0.1 7.8 7.8 0.5 1 15 367 381 367 383 0.91

13 28 0.00045 0.034 15.2 1.5 1 23 457 480 457 480 0.97

14 28 0.053 4 8.7 1.8 2 23 511 532 510 532 0.95

15 28 0.0048 0.35 12.0 3.2 1 23 553 576 553 576 0.97

16 28 0.0045 0.33 12.1 0.1 1 23 581 604 581 604 0.92

17 28 0.0012 0.088 13.9 1.6 1 23 609 632 609 632 0.96

18 28 0.2 15 6.9 0.1 2 23 638 660 637 660 0.94

19 28 2.1 1.5e+02 3.7 0.4 3 23 709 730 707 731 0.91

20 28 0.012 0.86 10.8 0.2 2 23 758 779 757 779 0.97

21 28 4.4 3.2e+02 2.7 1.8 1 23 801 824 801 828 0.91

22 28 0.0039 0.29 12.3 1.0 3 23 831 852 829 852 0.95

23 28 0.1 7.6 7.8 2.1 1 23 859 882 859 882 0.94

24 28 0.17 13 7.1 2.5 2 23 886 908 885 908 0.96

25 28 0.0066 0.49 11.6 1.1 1 23 915 938 915 938 0.96

26 28 0.086 6.4 8.1 0.1 3 23 946 966 945 966 0.96

27 28 3.7e-06 0.00028 21.8 1.5 1 23 972 994 972 994 0.98

28 28 8.9e-06 0.00066 20.6 0.2 1 23 1000 1022 1000 1022 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0021	0.16	13.1	3.5	1	23	22	45	22	45	0.97
2	28	0.0028	0.21	12.8	1.8	2	23	52	73	52	73	0.95
3	28	4.3e-06	0.00032	21.6	0.5	1	23	79	101	79	101	0.98
4	28	1.7e-05	0.0012	19.8	1.4	1	23	107	129	107	129	0.96
5	28	0.0044	0.33	12.1	0.4	1	15	135	149	135	152	0.90
6	28	9.2e-05	0.0068	17.4	1.4	1	23	190	213	190	213	0.96
7	28	3.5	2.6e+02	3.0	1.7	4	23	229	249	229	249	0.93
8	28	0.0003	0.022	15.8	1.1	1	23	254	277	254	277	0.97
9	28	0.00015	0.011	16.7	0.6	2	23	284	305	283	305	0.95
10	28	5.2e-06	0.00039	21.3	1.4	1	23	311	333	311	333	0.98
11	28	3.2e-06	0.00024	22.0	0.4	1	23	339	361	339	361	0.96
12	28	0.1	7.8	7.8	0.5	1	15	367	381	367	383	0.91
13	28	0.00045	0.034	15.2	1.5	1	23	457	480	457	480	0.97
14	28	0.053	4	8.7	1.8	2	23	511	532	510	532	0.95
15	28	0.0048	0.35	12.0	3.2	1	23	553	576	553	576	0.97
16	28	0.0045	0.33	12.1	0.1	1	23	581	604	581	604	0.92
17	28	0.0012	0.088	13.9	1.6	1	23	609	632	609	632	0.96
18	28	0.2	15	6.9	0.1	2	23	638	660	637	660	0.94
19	28	2.1	1.5e+02	3.7	0.4	3	23	709	730	707	731	0.91
20	28	0.012	0.86	10.8	0.2	2	23	758	779	757	779	0.97
21	28	4.4	3.2e+02	2.7	1.8	1	23	801	824	801	828	0.91
22	28	0.0039	0.29	12.3	1.0	3	23	831	852	829	852	0.95
23	28	0.1	7.6	7.8	2.1	1	23	859	882	859	882	0.94
24	28	0.17	13	7.1	2.5	2	23	886	908	885	908	0.96
25	28	0.0066	0.49	11.6	1.1	1	23	915	938	915	938	0.96
26	28	0.086	6.4	8.1	0.1	3	23	946	966	945	966	0.96
27	28	3.7e-06	0.00028	21.8	1.5	1	23	972	994	972	994	0.98
28	28	8.9e-06	0.00066	20.6	0.2	1	23	1000	1022	1000	1022	0.98

Sequence Information

Coding Sequence: ATGAGATTCCAATCGAAAGAGCAGAGAGACAGACACGTGAAAAATATGCACTGCAGCAAAGGATTCATATGTGACTTTTGCTCGCTAAAGTGCACGTTAAAAAGTACTTTACAGCGACACATACGAAAAGTTCACTTTAAAGAGAAAAATGAAACTTGTGATATTTGCGGGAAGAAATTTTTTGATGCTTGCTATCTGAACTTACACAAAGTAAGTCATCAAGATAAAAAATCGTTTGAATGTGATATATGCAAGAAGAAATTCGCCAGAAACGCGGCGCTGCAATTGCATAAGCGAATTCACAGTGATGACAGGAGATATTCATGTAAAATTTGTGGTAAAACCTTTGTCCAGTGGACCACGTTGCATATGCATAAAGTAGTGCATACTGATGAGAGAAATTTCAAGTGTCCAGTATGTAACAAAGCATTCAAAGATAAGGCAACTATGGACAAAATGACCGGCTATGACATCGACTCAAAAGCAGACAGTGTcaaaattaaatcttatttaGTTACGATACTTCAAAAAACAACCGCCGTGCCCTTTAAGATACGTGAAAACCAATATAAATGTTTCTACTGCGATAGAACCTTTGTTCTTCCTTCTAAACTAAGAGAGCACACCAATCAGGAGCATATAAGCACAAACTTTGACGAAATACTAAACATTTCGACAGAATTCAACCATTGCGACATGAGATTCCAATCGAAAGAGCAGAGAGACAGACACGTGAAAAATATGCACTGCAGCAAAGGATTCATATGTGACTTTTGCTCGCTACAGTTCACCTTAAAAGAGACTTTACAGCGACACATACGAAAAGTTCACTATAAAGAGAAAAATCAAACTTGTGACATTTGCGGGAAGACATTTTATGATACTTATTATCTGAACTTACACAAAGTAAGTCATCAAAATACAAAACCTTTTGAATGTGATATATGCAAGAAGAAATTCGCCAGAAATGAGACCCTGAAACTGCATAAACGTATTCACAGTAATGACAGGAGATATTCTTGTAAAATTTGTGGTAAAACCTTTATCCAGTGGACTTCGTTGAATATGCATAAAGTAGTGCATACTGATGAGAGAAATTTTAAATGCGTTGTTTGTAACAGAGCATTTAAAGATAAGAAAACAATGGACGTAAAAAAGAGGAAGAAAAAGACCATCAAAGAAGAGGTCAATGAAGAAGACGAAGATTCTTCTGTATCAGATACTGATATGCCGATTAAGAGAAAAGACATTAAAAAGCCAAATAAGAAAACCGGCATTGAAGAAGAAGCTAAGAGAGAGACACGACATCTTCTAACAGTTATAATAGAGACATCCACAGCAATGCCGTTCCGCAAAAATGGCAACACATTCAGATGTTTCTATTGTGAAACAAATTTTTACTACGCATCTGAACTGAAAGCCCACACCCTCAAAGAACACAGTTACGAAACTAAAAGACAAGTAAAGCAGGCTATAAACAGAAACGTTATCAAGAAAAATCTTATTGTAAAACTAGATGTAGCTGATCTCACTTGCAAATTATGTTCTGAATCTTTCAACACTCTTAAAGAACTCATATTCCATTTCCGCAAACACGATAAAGTTGTAACAGACAACCTTGATAACATGCTGTGTATGAAATTATCCGATACTGAGTTCAAATGTCTGTATTGTGAAAAAGAATTTGCCTTCTTCAAgaatttgtacatacatatacaccGGGAACATGTCACCAGACGTTTCATATGCGAAGCTTGCGGACTCAATTTCACTACAAACCAAGGTTTAAATAACCATACTGCGTATGTTCATATGCAAGGTAGTTTCGCTTGCTCGGAATGTGGCAAAAAATTTGCCGCGAAGCATCTTAGAAGCGCTCATATGAAGCGTTCTCATGACATAGAGAAGATAACTTGCCAGGTTTGCGACGCGATATTCAGCAGTGTTAATCAGAAAGAAACTCATTTAGCAAAGGATCACAATATTTGGATATCAAAAGAATTTAAATGCGACAAGTACGCGCAGAAGCAACAAGGCGCCCTAACGGAGACCCGTCAACTGTTATACAATATTCTAGAAAATTCTACAGCTTTACCATTCCGGATAAGAGGCAACAAATTCGGATGTTTTTATTGTGATGATACCATATCTTTACCATCAGAATTGAAAGCTCATTACGCAGAAAAACATcatattgaaaattataaagATTGGGCGATGCGTAACGTTACGAAAAGAAATATGTTGGCTAAATTAGATATAACTAATCTCAAGTGTAAAATCTGCTCTCAAACTATTGCCAGTCTACAAGAGCTTGTAGTTCATCTACGCAATCATGATAAAAAGATCATCAGTGACAATTTTGATAACATAATTGCTATAAAAATGACCGACAATGATTTTGATTGCATATATTGTCCTGAacaatttaaactttttaaacttttatactCACATATATATCGTGAGCATTTGAAAAGACACTATGGTTGCCCCACTTGTGGTGTACAATTTTATGATAGTCGATGTCTAAATAGCCATATACAACTTAAACACGcagaaaagaaatataattacgAATGTAAGATTTGTAGAAGGAAATTTTTCTCAGCAAATGCACGAACTTACCACGTGAAGCAGACACACGGAGATAACAAATGCCACATCTGTAATCTGAATCTGAGAAGCCCATTTCAAAAAGAAAACCATATGGCCAAGAAACATGATTTCTACATTAATGAATTTAAATGCGACCTTTGTCCAAAaaagttcatattaaacaaattcTTGGTTGATCATGTAAAAAACTtccatttaaaagaaaaaaataaaatttgtgacGTCTGTGGAGCTAGATTTTTTGATGTGGCAAGACTTAATCAACATAAAATCCGCCATAGTGAAGTAAAGCCTTTCGAATGTCCAAATTGTGACAAAAAATTTGCAAGACGGAAGACGTATATGCAACATTTAAGAATACACGCAGATGAACGAAATTACGTTTGTGAGGAATGTGGTAAAGCGTATGTACATCGGAGTGGGCTTGCCTGGCATAAGTTGACGCATGGGAAAAATAAGGGCCAAGTAAAAAATACTCAGGACACCCAAACACCTGAGAAAACTTCGTAA
Protein Sequence: MRFQSKEQRDRHVKNMHCSKGFICDFCSLKCTLKSTLQRHIRKVHFKEKNETCDICGKKFFDACYLNLHKVSHQDKKSFECDICKKKFARNAALQLHKRIHSDDRRYSCKICGKTFVQWTTLHMHKVVHTDERNFKCPVCNKAFKDKATMDKMTGYDIDSKADSVKIKSYLVTILQKTTAVPFKIRENQYKCFYCDRTFVLPSKLREHTNQEHISTNFDEILNISTEFNHCDMRFQSKEQRDRHVKNMHCSKGFICDFCSLQFTLKETLQRHIRKVHYKEKNQTCDICGKTFYDTYYLNLHKVSHQNTKPFECDICKKKFARNETLKLHKRIHSNDRRYSCKICGKTFIQWTSLNMHKVVHTDERNFKCVVCNRAFKDKKTMDVKKRKKKTIKEEVNEEDEDSSVSDTDMPIKRKDIKKPNKKTGIEEEAKRETRHLLTVIIETSTAMPFRKNGNTFRCFYCETNFYYASELKAHTLKEHSYETKRQVKQAINRNVIKKNLIVKLDVADLTCKLCSESFNTLKELIFHFRKHDKVVTDNLDNMLCMKLSDTEFKCLYCEKEFAFFKNLYIHIHREHVTRRFICEACGLNFTTNQGLNNHTAYVHMQGSFACSECGKKFAAKHLRSAHMKRSHDIEKITCQVCDAIFSSVNQKETHLAKDHNIWISKEFKCDKYAQKQQGALTETRQLLYNILENSTALPFRIRGNKFGCFYCDDTISLPSELKAHYAEKHHIENYKDWAMRNVTKRNMLAKLDITNLKCKICSQTIASLQELVVHLRNHDKKIISDNFDNIIAIKMTDNDFDCIYCPEQFKLFKLLYSHIYREHLKRHYGCPTCGVQFYDSRCLNSHIQLKHAEKKYNYECKICRRKFFSANARTYHVKQTHGDNKCHICNLNLRSPFQKENHMAKKHDFYINEFKCDLCPKKFILNKFLVDHVKNFHLKEKNKICDVCGARFFDVARLNQHKIRHSEVKPFECPNCDKKFARRKTYMQHLRIHADERNYVCEECGKAYVHRSGLAWHKLTHGKNKGQVKNTQDTQTPEKTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -