Pmus023276.1
Basic Information
- Insect
- Pelosia muscerda
- Gene Symbol
- -
- Assembly
- GCA_963691645.1
- Location
- OY829124.1:3623946-3626603[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8e-07 0.00016 21.9 0.0 8 38 100 130 99 134 0.82
Sequence Information
- Coding Sequence
- ATGTATGACCATGAGGAAATTGTCGAATATGATGATGTGGACATTGATGAACGTGAAGAAGAGACAATCGAAGCAATCGCCAGAGAGATACAACGTGGTGAAGAGTTGGGTGAGTCTGCATACTCTGAAATACTTAGTGGACAACATGAAAACGCTGAAGTAGAGGGTACACAATCCGAAGTACCAGACAGCCTCATCACCATCAATAACCCGCTAAATGTATCTTCACGAACGTCGAGGCCTAGACGAATACAATCACAAGTGTCTCTTGCCTCCGAGTGGCAGATCGATTTATACGCTCTGAGGCTTATGGCTAATGGAACATCTATGAGAAAAGCCGCCGATCAAACTGGAATTCCATTTTCTACGCTGCAAATTCGAAACAAGAAGAAATTGTTTGAAAACCCATCTCTAGGGCGAAAAACTGTATTTCCAGCAGAAGTTGAAAAAGAAATGGCTGATGTGTTGAAGAAAATggctaaaatattttacggtTGCACAGCTATCCAAGTAAGAAAACTGGCTTATGAATATGCAGAAAGTTTAAAATTGCCacagaattttaataaaaataataaaatggcgGGCCGAGATTGGCTTGAAGGCTTCTTAAAGAGAAATAGGATATCGGTAAGGAAGCCAGAACCCACCAGTATAAATAGAGTAACCGCCTTTAACAAAACAGAAGTTTCACTTTTCTACAAAAACTTGGAGAAACTTATGGAGACCTATAAATTTACccccaaaaatatttacaattgtgATGAGACAGGGATCTCAACCGTCCAAGATCCGGGAAAAATACTAGCTCCAAAAGGACAGAAAAGGGTAGGATCCCTTACTAGTTGGGAGAGGGGCAAAAATATCACCGTTATGTGTACGATGAGCGCTGCTGGGTCATTTGTACCCCCAATGTTTATCTTCCCAAGAAAAAGACATTCCCCTCTCCTGGAAAAAGATGGTCCAGCTGGTGCTATATACCGCTGCTCAGACAATGGCTGGATCAATGAAACCGTTTTTTTAGAATGGCTTCAACATTTCACAACATTTGTCAAACCTTCTGCAGAAGAACCAGTCTTGTTGATACTGGATAACCACGCGAGCCACATATCTCATGATATTTACAAGCACTGCAAAGCCCACAACATTCACATGCTGTCCTTACCACCACACACCTCCCATAGATTGCAGCCGTTGGACGTGACGTTTTACGGACCTCTTAAGGCTGCCTACAAAAAGGAATCTGACTACTTTATGAAGAGCCACCTCGCAGAACGAATAACTCCATACGATGTTGCATCGTTGTTCAACAAAGCATATTCGAAAGTTGCTTCTATAAGTAAGGGAGAGTCCGGATTTAGAGTCACTGGTATTTTTCCAATGAACTCAGATGTGTTCACTGACGAAGACTTTTTACCTGCTGAAATATTGCAAGGTGAACCAGTGATTATTCAAGATAACGAAAGCTGTTCTCCTCTTGAGACAACTGCAACTCTGACATCCCAAAAACCAATGGCGGTTGCACCAACACCTGTACAAGAACCCCTGGAGGTTAATGAACAAGAACTCCTGGTATTTGCATCAACGCCTGAACAGGAACCTCAGGTGGTTGCATCAACATCTGATGAAGAACCCCGGGTAGTTGCATCCACGCCTGTACAGGAACCCCAGGTGGTTGCATCAACATCTGTGCAAGAACAACTGGCAGTCGCATCCACATCTGGGCAAGAAATACCGCCAAGAAAACGACCAAgtgttgaaaattttattaattttcctaCCAAAACACTGTCTGTTAGTACAAGGCAAGGACGAAAAAAGCAACATTCTACGATTCTGACCTCGACGCCAATCAAAGACAGTCTTATAgaaaaggaaaacaaaaaactgaACAAGATCTTAAAAGAAAAGGGAAAACAAAAAGGCAAAGGGAAGGGAAAAAATACCAAACAGAACAGGGAAAGTATTAAAAAGGCTAAACGGAAAGTTCTTCAGGAAGACAATGACTCGTCATTGACTGACGTAGATATTGAGGACCTCTgcgtagatgatgatgatgatgaggactCAGAAAATCATTGTCTTATATGCGGAGAATTCGGCCAAAATAACGAAATATGGTACCGGTGCACTTCCTGTGGGCTGTGGGCTCACTCTGCTTGCACTGGTTGGGATTCCGCTACAGGATACGTATGTGACATGTGTTAG
- Protein Sequence
- MYDHEEIVEYDDVDIDEREEETIEAIAREIQRGEELGESAYSEILSGQHENAEVEGTQSEVPDSLITINNPLNVSSRTSRPRRIQSQVSLASEWQIDLYALRLMANGTSMRKAADQTGIPFSTLQIRNKKKLFENPSLGRKTVFPAEVEKEMADVLKKMAKIFYGCTAIQVRKLAYEYAESLKLPQNFNKNNKMAGRDWLEGFLKRNRISVRKPEPTSINRVTAFNKTEVSLFYKNLEKLMETYKFTPKNIYNCDETGISTVQDPGKILAPKGQKRVGSLTSWERGKNITVMCTMSAAGSFVPPMFIFPRKRHSPLLEKDGPAGAIYRCSDNGWINETVFLEWLQHFTTFVKPSAEEPVLLILDNHASHISHDIYKHCKAHNIHMLSLPPHTSHRLQPLDVTFYGPLKAAYKKESDYFMKSHLAERITPYDVASLFNKAYSKVASISKGESGFRVTGIFPMNSDVFTDEDFLPAEILQGEPVIIQDNESCSPLETTATLTSQKPMAVAPTPVQEPLEVNEQELLVFASTPEQEPQVVASTSDEEPRVVASTPVQEPQVVASTSVQEQLAVASTSGQEIPPRKRPSVENFINFPTKTLSVSTRQGRKKQHSTILTSTPIKDSLIEKENKKLNKILKEKGKQKGKGKGKNTKQNRESIKKAKRKVLQEDNDSSLTDVDIEDLCVDDDDDEDSENHCLICGEFGQNNEIWYRCTSCGLWAHSACTGWDSATGYVCDMC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00120418;
- 90% Identity
- iTF_00120418;
- 80% Identity
- -