Basic Information

Insect: Pelosia muscerda
Gene Symbol: -
Assembly: GCA_963691645.1
Location: OY829111.1:4902963-4904858[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.5e-08 9.1e-06 25.9 0.0 1 41 12 51 12 55 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.5e-08	9.1e-06	25.9	0.0	1	41	12	51	12	55	0.89

Sequence Information

Coding Sequence: atgccTCCAATAAAGGGCAAAATGTTTAATTACTCCGAGGATGATATGATGAAAGCGTATAATGAAGTAAAATCTGGGATTTCCATAGCTGCTGcgtctaaaaaatataaaattccttATAGCACACTGTCATATAAAGTTCATGGTAAAACTCCTTTTGAGCGCCGTATGGGCCCAGTCTCATATCTATCTGCAGAACAAGAAGATGTCATTGTCCTATGGATAATTGAGATGGCTAAAGCTGGCTTTCCCGTAACTGTACAGCAGTTACAGGATAGCGTGTGCAAGCTGGTGActactttaaatattaaaactccTTTCAAAAATAACAGACCTGGGAGACACTGCTATGAATCATTTCAAAAAAGACATCCACAAATTAGCCTTAGAATATCCCAAAATTTAGCAGAACCTAGAgcagctgttacaaatgagGCATTAAGCAAATGGTTTGCGGAAATTTCCGAGTTCTTTGCAGATAAAAATTTAGACGCTGTCATCCTTCTTCTGACGGGAAATGCAGCGGGGGATCTACCACCTCCTATGATCGTATATCAGTACACGAGAATTCCTAGAGATTTAGCTCTTAGCGTACCAAAAAATTGGGGTATTGGCTGTTCAGAAAACGGCTGGATGACGGGCGAAACATTTTTTGAGTTCATCGCAAACATTTTCAATCCATGGCTTAACGAGAACAATATCGAAAAACCAGTAATATTCATCGATGGACACACTTCACATTTGACGCTTCAAACCAGCAAATTCTGCTCTGAAAATGGTATTGTTCTTGTGGCGTTGTACCCAAATGCCACCCATTTAATACAACCTATGGATGTTTCAGTATTTCGCACCTTAAAATCAGCCTGGAAAACTGGTGTCCAAAATTCGCGCTTACAAAACATGGACAATCCTAGACTTAGAAAAGTTCACTTTGCCCCACTCTTAGACCAAGTCCTGAAGacgactttaaaaaaatctctCTTCGAAAATGGTTTCCGTAAATGTGGACTTTGTCCATGGAATTTAGATGCAGTACTTCAGCCAACAGTAAGAACTAATACTTTAATAGAAGATCAAACCAAATCTCTAAAAGAATTGAGAGAGGGGTTATCTTTAGTTgaaaaaaattttggacaggCTAAACTAAACATTTTTCGAAATACCAAAGAGTTGACAGTAGATGTAAAAGATCAATCACTTTATGAATTTTGGAAGAATATCAAGAATGAGCATGATGCTCTTTTACAATCTGGTAGGCAATGTTTTACGACTGATGAACAAGAGGATTCCATTTATATcaataatgaaaatgataacaGTATTGCAGAGATACATTTAGAAAGTTTAAGGGCTTCAGAATGTTTATTGACACCTTCGCTTGAAACTAACAACTTCTTGAACGCTTCCGAAGTGACAGAGGTTTTGAGTAATTTGAATGTAAGGGAAAAGGACAAAACCACACCAACCAAATCTATTAGTGACACAGAAAAAGAACAAACAACTAAAGTGACTGTTATTCCAGAGCCATTTTTTACCATTACGTCTACTGTCGTCCAGCCGTCTCTTCCGTTAAGTCCTATACAGCCGATAGCCTCAACTAGCACAGCAAAACCTATTCCTACACCATTTAAAAAATCTCTGTTCTGgccaaaagaaaaagaaaacaataaaaagaagaGGAAAACTGAGAAAGTACCTGCAGTAATTACATCAGAAAAGTGGCAAGAGTACCatgaaagtaaagaaaaaaaaacaacttga
Protein Sequence: MPPIKGKMFNYSEDDMMKAYNEVKSGISIAAASKKYKIPYSTLSYKVHGKTPFERRMGPVSYLSAEQEDVIVLWIIEMAKAGFPVTVQQLQDSVCKLVTTLNIKTPFKNNRPGRHCYESFQKRHPQISLRISQNLAEPRAAVTNEALSKWFAEISEFFADKNLDAVILLLTGNAAGDLPPPMIVYQYTRIPRDLALSVPKNWGIGCSENGWMTGETFFEFIANIFNPWLNENNIEKPVIFIDGHTSHLTLQTSKFCSENGIVLVALYPNATHLIQPMDVSVFRTLKSAWKTGVQNSRLQNMDNPRLRKVHFAPLLDQVLKTTLKKSLFENGFRKCGLCPWNLDAVLQPTVRTNTLIEDQTKSLKELREGLSLVEKNFGQAKLNIFRNTKELTVDVKDQSLYEFWKNIKNEHDALLQSGRQCFTTDEQEDSIYINNENDNSIAEIHLESLRASECLLTPSLETNNFLNASEVTEVLSNLNVREKDKTTPTKSISDTEKEQTTKVTVIPEPFFTITSTVVQPSLPLSPIQPIASTSTAKPIPTPFKKSLFWPKEKENNKKKRKTEKVPAVITSEKWQEYHESKEKKTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -