Basic Information

Insect: Pelosia muscerda
Gene Symbol: -
Assembly: GCA_963691645.1
Location: OY829124.1:2319863-2321917[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-09 3.9e-07 30.3 0.0 2 35 17 50 16 55 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-09	3.9e-07	30.3	0.0	2	35	17	50	16	55	0.94

Sequence Information

Coding Sequence: ATGGCTCCGCGGAAACCACATTCACAAAGAAAACGACAAACATGGTCCAAGGAGTCTATGAAAAAAGCTATAGAAGATGTGAGAACCAAGAAAATGGGTTCCTTAAAAGCATCTAAGTTATACCAAGTACCACGTACTACTTTGAGACGTTTGGCAGCTACAGAACAACCAGCTGAGGTAGCGATTTGCGCCAAATTAGGAAGAAAGCCCACCTTGCCTGATCAATTAGAGGATCAGCTTGTTCAATACGTGTTGGCTATGGaagcaaaattatttggtttagtGCGTAAAGACATAATGAGTTTAGCTTATCAGCTAGCGGTTAGAAATAACATCACACACACTTTTTCAGCAAAAAATGCAAGCGCTGGGAAGGATTGGTTAAAATCTTTTTTGGGCAGACACCCAGAACTTTCATTTCGTCGCCCAACAGGAACATCGTATGCACGAGCCAAAGGATTTAATAAAGAAAGTGTTGAACATTTTTTCAATCTTTATGAAACACTGATGGACGAGTATAAATTCTCTCCTAATAGAATTTTTAACGTGGATGAGACAGGAATTAGCGTCGTACCATCCCAAATGCTGCAAGTCCTGAGTCAAAAGGGAAAGCGTCAAATAGGTGCTTTAACATCAGCCGAACGGGGTTCCCTTATAACTTGTGTAATTTGTATGAGCGCTGGGGGATCATTTGTTCCACCCATGATCATATTCCCCCGAAAAAGGAGTCACCCACTTTTGATGAAGGGTGCGCCTCCAGGAGCCATACATGAATGTCACCCTTCAGGTTGGATTCAAGCCAACATATTCACAAAGTGGTTTCAGCATTTTCTAGAACACGTGAAACCCACTGAAGAATCTCCGGTACTGCTATTCCTAGATGGTCATACAAGCCATACTAGAAACTTGGAATTGATAGATCTTGCAAGACAAAATCATGTCCACTTAGTATCAATCCCTCCACATTCCAGCCACAAAATACAACCTCTAGATAAGTCTTTCATGGGACCACTAAAAAAGTATCTTGCTGATGAAATAAGATTTGCTGTCAGGCACAATCCACGACCACTAACTCAATATGATATCATGGAAGTTTTTGGACGTGCGTATTTACGAGCACAAAGTGGTGAGATAGCCGTTAATGGTTTTCGCGCAACCGGACTGTACCCTCTTGATAGAAATGTTTTTAAGGATCATGACTATATTGATTTAGATGACCAAGAATTAAATATCACCAACCAGGACAATATCACACTAGAACTTACTACTTCATCTGTTACTGCTATAACAACAAATGAGTCCGATGTGATATCTAGTGAAGAAATCCCTGTGTTAAGAGAACAGAACGAAACTCCAACTTTAAGTTCTGTGCAAGTTCTCGCCGCAATATCTCCTCAGCCATCTACATCAAGAGAACCGAACAAAACACCACCTATATGTTCTGTTCAAGTTGGAGTTCACACCGCAATATCTCCACAGCCATCTACTTCAAGAGATCCTGTGTTAAGAGAGCAGAACAAAACACCACCTATTTGTTCTGTGCAAGTTAGAGTTCCCACTGCAATATTTCCACAGCCATCTACTTCAAAAGATCAGGACTTTGTAACCCCATTTCAAATATCTCCGATACCAAAAATTCAGACTAGAAAAACTTCTAACCGAGGCAGGAAAGCTGCTAAATCAACATTACTAACTTCATCTCCATATAAAAAAGACTTACAAGACTCATTAAAGAAGAAAGATGATAAAATCAACAAAGCATCTGTCAATAAAGGTAAAAAACAAAAAGGGAGGTGTAAGAAGTTAAAGACGAAGGAGTTACAAATATCAAGCTCAGAGGAAGAAAATGAGCCTATGTACAATGATAGTTCTGATGAAAGTCCAGACAGAAGTAACGTCTCTGATGCCAAGTGTTTATACTGTGAAGCTCTCTATTCCATGGACACGAGAGGAGAGTCTTGGATCCAGTGCTTAAGTTGCAAATTATGGGCTCATGAGGAATGCTCAGGGGTAGACACAGATATATATTTCTGTGAATTTTGCTCTGcaaagtaa
Protein Sequence: MAPRKPHSQRKRQTWSKESMKKAIEDVRTKKMGSLKASKLYQVPRTTLRRLAATEQPAEVAICAKLGRKPTLPDQLEDQLVQYVLAMEAKLFGLVRKDIMSLAYQLAVRNNITHTFSAKNASAGKDWLKSFLGRHPELSFRRPTGTSYARAKGFNKESVEHFFNLYETLMDEYKFSPNRIFNVDETGISVVPSQMLQVLSQKGKRQIGALTSAERGSLITCVICMSAGGSFVPPMIIFPRKRSHPLLMKGAPPGAIHECHPSGWIQANIFTKWFQHFLEHVKPTEESPVLLFLDGHTSHTRNLELIDLARQNHVHLVSIPPHSSHKIQPLDKSFMGPLKKYLADEIRFAVRHNPRPLTQYDIMEVFGRAYLRAQSGEIAVNGFRATGLYPLDRNVFKDHDYIDLDDQELNITNQDNITLELTTSSVTAITTNESDVISSEEIPVLREQNETPTLSSVQVLAAISPQPSTSREPNKTPPICSVQVGVHTAISPQPSTSRDPVLREQNKTPPICSVQVRVPTAIFPQPSTSKDQDFVTPFQISPIPKIQTRKTSNRGRKAAKSTLLTSSPYKKDLQDSLKKKDDKINKASVNKGKKQKGRCKKLKTKELQISSSEEENEPMYNDSSDESPDRSNVSDAKCLYCEALYSMDTRGESWIQCLSCKLWAHEECSGVDTDIYFCEFCSAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908761;
90% Identity: iTF_00908761;
80% Identity: iTF_01166580;