Pmus010768.1
Basic Information
- Insect
- Pelosia muscerda
- Gene Symbol
- -
- Assembly
- GCA_963691645.1
- Location
- OY829108.1:7473321-7475207[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-11 6e-09 36.1 0.0 1 40 17 56 17 60 0.94
Sequence Information
- Coding Sequence
- atgCCTAATAAGTACGTGAGGAAGCTGGTAGCTGGCCGTGGTAACTGGGATGAAGAAGACCTAAAAAAAGCCATGGCTGAAGTGCAAAATAGCACAATGTCAGTATACAGAGCCTCTATTATATATGATATACCGAGAAAAACCTTAGAAAGGAGGCTTAAactgaataattataataagggCCCAATGGGTCCATCTTCTACGTTTGGTGTTGACAATGAAAAGAGGCTATGTAAACACATAAAAGATATGCAGTCTAAAGGGTTCCCATTAACAATTGACGACTTAAGAAGAATTGCGTTCAAATTTGCCGAGCAATTGGAAATAACACATCGATTTAATGTGTTATCTGAGAAGGCAGGTTATGATTggatacaattatttttaaatagaaatcCTGATATTTCCTTGAGAAAGTCAGAAGGAGTCTCCTACGCTAGAAGTCAAGGAATGAATAGGTCAGAAGTAAGTGCTTATTTCGAGATGCTCGAGAAAATACTTAGTGAAAATGATTTGCTTGAAAAACCAgccaatttatttaatatggaCGAAACTGGCTTACAACTGAACAATCGTCCAGGACATGTTTTAGCTGAAAAAGGCTCCAAAGCTGTAGCAATGTCTACCTCTACAGAGAAAGGGGAAACTATAACTATCATAGGGTGTTGTAATGCGGAAGGAAATTTTCTGCCTCCGGCATGCATTATGAAAGGGCAAAGAAAAAAACCCGAATTTGAAGATGGCTTGCCTCCGGGTTCACAGATTTTTATGTCACAAAAATCGGCCTACATAACGTCGGATATATTTTTAGAATGGATGAGAACTCATTTTTTGCCTCGCAAACCAGCTGGTAAAGTGCTTCTTCTGCTTGATGGGCATTCAACACATTGCAATTCTGTAAAGATGCTTGAGTTCGCGAATGAGAATGACATCATCCTGCTGTCGATGCCAAGTCACACATCACACTATCTACAACCGCTAGATGTTGCTGTTTTTAAATCTCTTAAAACTTATTTCTATGAGTCTTGCAGATTATGGATGAAACAGCATCCGGGACGTCGTTTAACAAGACATCAGTTTGGCTCCTTGCTAAATCAAGCTTGGGGTAAATCAGCCACTAGTGAAAATGCAACATCAGGGTTTAGAGCCACTGGAGTTTTCCCATTAAATCCAGGATCTATACCCGAGTACGCCTTTGGAGGAAACACCGAACCACTAGTTGACAGCCACCACAAAGATTATACAGGGACGACACAATTAACTGGCCCAAGTACTTCGAAAACTCAAACATCATGTGACAAACCTACACCGACTAGAGTACTTAATGAAGTATCACCACTGCCACAAAAACTTAAAGAAATCCGTAAACGTGCCAAACAAGTAAGTATTCTTTTAACATCTCAAGAACATATcgaaaatcgaaaaaaaaaagaagaagaaaagacggaaaaagaaaaaaagtgtgGGAGACCAAAGATGATAAAGCAAGAAATAACGACTGATAAATTTAAGGAAAACAAGACTGTTAGGAAACGTAAAGCTATTCGTAGGATCTCAGACAGTAGTTGTGAAGAGATTCCGATGGCCCTCTGCGATACATCCGAAAGTGAGAATGAAGATAAAGAAGAGGATAACTGCAGAGGCTGTGGAGAAAACTATTATAAGACAGTACTTGTTGAAGACTGGCTGCAGTGCAATATTTGTAGATTGTGGACGCATGAAAATTGTACGCCGTATGAAGACATGTGCTCCTACTGcggtaataagaaaaaaaaggagTTGATGCCTGCTGGTAAAGGCAAGGGAAGAGGAAAAAAAAGCATAGGCCAACTCCCCCCGACATCTATGGCCATCACACCCGGACACTCTGGGAGAGATGGCCACtga
- Protein Sequence
- MPNKYVRKLVAGRGNWDEEDLKKAMAEVQNSTMSVYRASIIYDIPRKTLERRLKLNNYNKGPMGPSSTFGVDNEKRLCKHIKDMQSKGFPLTIDDLRRIAFKFAEQLEITHRFNVLSEKAGYDWIQLFLNRNPDISLRKSEGVSYARSQGMNRSEVSAYFEMLEKILSENDLLEKPANLFNMDETGLQLNNRPGHVLAEKGSKAVAMSTSTEKGETITIIGCCNAEGNFLPPACIMKGQRKKPEFEDGLPPGSQIFMSQKSAYITSDIFLEWMRTHFLPRKPAGKVLLLLDGHSTHCNSVKMLEFANENDIILLSMPSHTSHYLQPLDVAVFKSLKTYFYESCRLWMKQHPGRRLTRHQFGSLLNQAWGKSATSENATSGFRATGVFPLNPGSIPEYAFGGNTEPLVDSHHKDYTGTTQLTGPSTSKTQTSCDKPTPTRVLNEVSPLPQKLKEIRKRAKQVSILLTSQEHIENRKKKEEEKTEKEKKCGRPKMIKQEITTDKFKENKTVRKRKAIRRISDSSCEEIPMALCDTSESENEDKEEDNCRGCGENYYKTVLVEDWLQCNICRLWTHENCTPYEDMCSYCGNKKKKELMPAGKGKGRGKKSIGQLPPTSMAITPGHSGRDGH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282224; iTF_00282225; iTF_00282226; iTF_00282227; iTF_00282228; iTF_00282222; iTF_00954354; iTF_00954353; iTF_00954355; iTF_00954356; iTF_00954357; iTF_01091645;
- 90% Identity
- iTF_00282224;
- 80% Identity
- -