Basic Information

Gene Symbol
jarid2b
Assembly
GCA_963691645.1
Location
OY829098.1:2755612-2776937[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-16 5.6e-13 49.7 0.1 7 88 1255 1333 1249 1334 0.91

Sequence Information

Coding Sequence
ATGCCGTCAGATGATCACGAAACGAAGTTGATTATGTTGACTCAAAAGAAAGAATTGTTATTCGCCCGCATTTCTCGTTGGTATAAGTCTTCAAAATCTATTAATTATTTCGATTTATCGACGCGGTCTAATGAGGACTTTCTGGCTGAGACCGAGACCATAGATGATGTACGCAATAAATTCGAGTCTATTGTAGATGAGATAAATAACTTAAACTTGTCATTAGAACCCTCGGTTGAACCTGATTACTCGTGCCTCGACTCATTTGATGACTTATATTCACGAATAAAACGCGTTAGAAATAATATGTCCATTCCCAAGGTCACAGAGAACGCCTCACACGGGTCGCGTAATTCGAACACGTCTGTAGTGAAATTAGAAATTGTGGACTCACTCGATACCTTCATAGGTATATTTTCGTCGTCTATCGCCGCGCTTAAAGAATTAGGTATTGATGATTTGACTGACTTTGTGTTTCTACAATGTGCCTTGAGGAAAATGGACCCTCAAATCATACAAGCCTTCGAACTTTCTGTTCGAGGTGTTGACTTACCTAAGACGCAACAGCTGATCGACTTTGTACAAGATCATGCTAAGATGATTGATCGGTCAAACCCGCGGTCTTCGTCGTATGCGAAGTCGTCCGCCGCTGCTGTAACGCCTCGGTCTCGCGATGGGCGTGTACAGCGTAATTCTAAGTCATTTGTTGCGACGACTACTGTCGCGCCTTCTCCGCCCCAGTGCACCCAGACTGGTCTCGCTCCCGAGTCACAGCTTGCTGCTGGTACTGCGCACTCGTATGCCTCTAGCCATAAGTGTGATATACTTTTAGCAACCGCTCAGGTGTACGCTCGCCCTAAAGGTAGCACTGGGAATAAATCTGTAGTCAGATGTCTTATTGATAATGGCTCACAGAATAACTTAATAACATTGTCCTGCTGTCGTTTATTAAATTTACCAATAATACCGTTGAGTAATTCTGTTGTCAAAGGTGTTGGTTCCACTTCGCTCCCGATAGTAGGCTATGTTAATCTGGACATTGAATCCCGTATTTATGCAGATCAGAAATATACTATACACGCGTTAGTTATGAATAGCCTTACGGATCAATTGCCCTCGCAATTAATTAAATGTGATCGCGATTTAAATCTATGCGATTTACCGCTCGCTGACTTAAGCTGGAATGTTCCAGGAAATATTGATATCGTGTTAGGTGCACAGCTATTCCCGTACATCTACTTAGGAAATAGGGTCGAGTGTGGTCCCAATGCCCCTTGTGTACTATCAACAGCATTTGGGTCAACGCCCAGAAGAGTATTTGCTCAACGGAAGTTCGCACAGGGTGCCTACGTGCCCCCTTTGGCTGGCCCCCAGCCTAGCACCAGTGGGTATGTCGCCCCAGAGCGCCGGGAGCCTGCAGTCTCCAACGACAGAGGCAGTGTCACCCACAATAATGTATCGGCCAAATCATTGCTGGACGTCCTTTCTCTCACTGCAGtttcacATGCTACTCTCTCTCCGCCTCTCGTCAATCCGAATGAAACTCCCGTCGTATTGGTACAGAGGCTACCCGAAAAGAGCTTACAACACTGTCGCGAACAGAGCGCAAGCAGGAATAATGTTAACAATCACACATCTGTTGAAAACGGTGCATCTGGCGACAATCGCGCATCGGTCAACAATCGCGCATCCGTTAACAATCGCGGGTCTGCTAACAGGCGCACGTCTGTGGGATCTGTAGTTAATAGCCGAGCTAACAAAGTGACAAAAAAGACCCGTGGCAAACCGGCCCAACCCGTACGGCATTCGATGAAATTGCGTTCTGTCAGAAGTCCGCCTAAGTGGATGCAATATGCGTCCGAATTTAATGTCGTCAGGACTCCGAGGGCAGTTAGGTTACCGCCACCTCAAGCCGTCGATACCTCTCAAGTTGCCAAGCCACCAGACGAACCAAAACCACCCGCACCTAAAAGGAAAAAAGCAGCTCGTAAAAAGAAGCCGAAATTCACGTCAGATGACAATATGCCCTTGAAATATTTGGCGCAAAGAAACCGAAGTCCAAATATGAACGATATGGCGCAAAGAAACCGAAGTCCAAATATGAACGATATTCAGCCGTATTATGCTTCTGCAGGCGTGGCGAGGACGTCGACAAGGGCGTTGTATAGAACGTCGCCAAGGGTGTACCACAAGCCGGCTGAGCCTCCCGAGCCACCAGATATAATCATGGAAGCGCCTCTTCATGACACAGCGCCTCTTCATGTCACAGCTCCCCCCATGGAACCTCAAGAGATGGCAACAGTGGTTGTTGAGAGGTTGACGACAGGCGAACCACAAGATCTGGAGGAGAAACATATAGCATATAGCCATACAGGTATCTCCACACACACGTCGATGGTGGTAGAAGTAGATCCGAGAACACAACCCCCTGGACTCATCGCGGAAGTACATAATGTAGACGCAGGTAAAGCAAGACAGCCATCCGCAATAATTGTGGAGACATGTGCAGATATACACTTGGAAGTGCGTCGTCGGAAGTCAGGCGTGGCGAGGACGTCGACAAGGGCGTTGTATAGAACGTCGCCAAGGGTGTACCACAAGCCGGCTGAGCCTCCCGAGCCACCAGATATAATCATGGAAGCGCCTCTATATGACACAGCGCCTCTTCATGACACAGCTCCCCCCATGGAACCTCAAGAGATGGCAACAGTGGTTGTTGAGAGGTGGACGACAGGCGAACCACAAGATCTGGAGGAGAAACATATAGCATATAGCCATACAGGTATCTCCACACACACGTCGATGGTGGTAGAAGTAGATCCGAGAACACAACCCCCTGGACTCATCGCGGAAGTACATAATGTAGACGCAGGATTGGATGACGAGAGCGTTATAGAGGTAAAAGTCACGGATGCCCCGACAGCTTCTTCTACTCCTGTCAATTACTCCAGCGCCCAGGGCATCCACCGCTGGTTAGACGATACAGTCTCGACGGAGACGGAGTCTATCGCGCCAACGATCGTAGACGACGATGATGACGTCATCATTGTGTCTGGCGACTGCCCATCACACAAGTGGAACACCATCAATGACGCGGCAAGAGCCCCGGCTGTTGAATTCCAGTCTCGATGCAAAGAGTGCCAGCACTGTTTGAGGGTTGAAAAGGCGGTTAAGTTAACCGCTCTTCTGAAAAGACAGAGCAAGATAGAGTGTATTACTGACGAAGCAGTCGCCGGGCCGAGCACCGACCCGGATTTACAATTGAAAAAGGAATTTGATGAGCATTACACAACGGAATTACTGCCTAAACATCCTCATCTTATGATCAAGATACGGTTGAGGAACACGCATACGAGACAGTACTCTGCCTGCCTCATCCCCAGATCAGAGGCAAAGGGCAGTGAAATGTTCTGTCTGGTGGAGAAAGAGCCCATCCTAGACCAGATGATTGAATCTCTGAGCTTACGGCTGGGCGACGTTCCAGCGAACCAGATAATTGGTCCGGTAGAAGATATTATCAGCAAACCAGTCCATAATAAATATGACGCACCTATATTCTACCCGACTGTGTTAGAGTTCGAAGATCCAATTACGTACATCGAAAAAATTTGGCATCGCGCAGCCAAATACGGGGTGTGCAAAATTGTGCCGCCGGATGGGTTCGTGCCGACTTGCAGTATATCTGAAGAAATACGATTTCAAGTCACCAACCAATATGTTAACAGACTGTACAAGCGATGGGGTGAAGCTTCCAGATCTATTAGTGCTATTAGTGCCTGCCTTAAGAATCATAATGTTGATCTGAAACAAGCTcaaatgATTCAGGGCGTGGAAACTAACCTTGTGAAATTAATGCAAACCGTTGATAAGCATGGTGGTATCCAAACTGTAATCAATAAGAAAAAATGGACTAAAATAGCGGAAGATATGAACTTTAGCAAACACCCGCACGTTCGACGCAAGCTGGAGGTGTTGTACTACAAAGCGCTCTTACCGTTTTGCACCCTCACTGTCGAGGAGCGCGATGAACACTTCAAAGCTAGTGATTTATATTGGGAAACTACCCACGCTAAATTACTTAAACGAGCGCAAGACCCATTCCATCAACGAACTCGTTTGTTGTCCGGCCTTGAGGCTTCCGACAGCGAAATGGACCTTGAGTATGAGGAAGAATGTGTCAAGGAAAGTGGCATCTCCATGAACATAGCTGGATTTAAAAAGATATCAGGGATAGTTCACGATCAGCTTTACCATACGAAAGGAGTATATTTGAAAGAGTACGAGCGGGATTATTGGAATCTTGTACAATCGGGCACGGAACACATTTGTGTGAATTCGGCATCGATCGATACAGGCCTGGCTGGTTACGGTTTCACAAAGAACCCTGATGATGAGTACGGCCGCCATCCTTGGAATTTGAAGGTGCTGTCGAAGAACCCCGAAAGCATGCTCCGGCCGCTCGGTTCGGTGTTGGGCCTGACTGTTCCCTCTCTGCACCTGTTCATGATCTTCTCCACCAGCTGCTGGCACAGAGACCCGCACTCACTGCCCTGGATCGAGTACATGCACCACGGCGAACCCAAGATATGGTACTCGGTGCCTGAGAGCCAGGATGCGAAGTTCCGCGCCGCCACTGAGGAGCTGTGTCCAATTGCGGTCCAAAAGAAAAGGGCCCTCTGGCTACCAACCGACATAGCCATGATCCCGCCGGATGTATTGCGCGCCCGAAATGTCAACGTCTACCGCACAGAGCAGAAGGCGGGCGAGTTCATCCTCGTCATGCCGAAGGCCTACTCCTGCTCCTTCAGCACGGGCTATGCGGTCACCGAGAGCACGTACTTGGCTACCAAGCGCTGGCTGCCTAACCTGCTAGATATTTTTAACGACGCCCGGGACTCCGACGAGCCAACTATGTTCAGTTTGGAGCAGTTCCTGAAGTTCACAGCCGAGGACCCGGATACTGAATACTCGGTGTTGCAAATCATCCAACCGGCGCTGGTGAAGGTGTACACGCAGGAGATCGAAAACAGACAGGCCATGCTGGAAATCGGCGTAACCGCACAAATGACGCAGAAACCACGATGTGACGCGACTGTGAAGGACCCTACGAAGCCGCCGTGGAATGTTCGAGACATCGGCGAGTGCGGATATTGTCGGTGCCCGCTCTTCTTGTCGGAGGTGAAGGACGTACCAACACCGGGCTCGACGCTGTGTGTAGAACATGCCCTGTTCATTCTCAGGCTGCCCAAGTTCTCCGGCTTTGATACCTCGACTGTGACCATGCTTTACACTTACACCGTGGAAGAACTCAGGCAAACGCTGAAGCTCGTGGAAAGCCGCCTAGCAACAGGCAATCAGGCTTAG
Protein Sequence
MPSDDHETKLIMLTQKKELLFARISRWYKSSKSINYFDLSTRSNEDFLAETETIDDVRNKFESIVDEINNLNLSLEPSVEPDYSCLDSFDDLYSRIKRVRNNMSIPKVTENASHGSRNSNTSVVKLEIVDSLDTFIGIFSSSIAALKELGIDDLTDFVFLQCALRKMDPQIIQAFELSVRGVDLPKTQQLIDFVQDHAKMIDRSNPRSSSYAKSSAAAVTPRSRDGRVQRNSKSFVATTTVAPSPPQCTQTGLAPESQLAAGTAHSYASSHKCDILLATAQVYARPKGSTGNKSVVRCLIDNGSQNNLITLSCCRLLNLPIIPLSNSVVKGVGSTSLPIVGYVNLDIESRIYADQKYTIHALVMNSLTDQLPSQLIKCDRDLNLCDLPLADLSWNVPGNIDIVLGAQLFPYIYLGNRVECGPNAPCVLSTAFGSTPRRVFAQRKFAQGAYVPPLAGPQPSTSGYVAPERREPAVSNDRGSVTHNNVSAKSLLDVLSLTAVSHATLSPPLVNPNETPVVLVQRLPEKSLQHCREQSASRNNVNNHTSVENGASGDNRASVNNRASVNNRGSANRRTSVGSVVNSRANKVTKKTRGKPAQPVRHSMKLRSVRSPPKWMQYASEFNVVRTPRAVRLPPPQAVDTSQVAKPPDEPKPPAPKRKKAARKKKPKFTSDDNMPLKYLAQRNRSPNMNDMAQRNRSPNMNDIQPYYASAGVARTSTRALYRTSPRVYHKPAEPPEPPDIIMEAPLHDTAPLHVTAPPMEPQEMATVVVERLTTGEPQDLEEKHIAYSHTGISTHTSMVVEVDPRTQPPGLIAEVHNVDAGKARQPSAIIVETCADIHLEVRRRKSGVARTSTRALYRTSPRVYHKPAEPPEPPDIIMEAPLYDTAPLHDTAPPMEPQEMATVVVERWTTGEPQDLEEKHIAYSHTGISTHTSMVVEVDPRTQPPGLIAEVHNVDAGLDDESVIEVKVTDAPTASSTPVNYSSAQGIHRWLDDTVSTETESIAPTIVDDDDDVIIVSGDCPSHKWNTINDAARAPAVEFQSRCKECQHCLRVEKAVKLTALLKRQSKIECITDEAVAGPSTDPDLQLKKEFDEHYTTELLPKHPHLMIKIRLRNTHTRQYSACLIPRSEAKGSEMFCLVEKEPILDQMIESLSLRLGDVPANQIIGPVEDIISKPVHNKYDAPIFYPTVLEFEDPITYIEKIWHRAAKYGVCKIVPPDGFVPTCSISEEIRFQVTNQYVNRLYKRWGEASRSISAISACLKNHNVDLKQAQMIQGVETNLVKLMQTVDKHGGIQTVINKKKWTKIAEDMNFSKHPHVRRKLEVLYYKALLPFCTLTVEERDEHFKASDLYWETTHAKLLKRAQDPFHQRTRLLSGLEASDSEMDLEYEEECVKESGISMNIAGFKKISGIVHDQLYHTKGVYLKEYERDYWNLVQSGTEHICVNSASIDTGLAGYGFTKNPDDEYGRHPWNLKVLSKNPESMLRPLGSVLGLTVPSLHLFMIFSTSCWHRDPHSLPWIEYMHHGEPKIWYSVPESQDAKFRAATEELCPIAVQKKRALWLPTDIAMIPPDVLRARNVNVYRTEQKAGEFILVMPKAYSCSFSTGYAVTESTYLATKRWLPNLLDIFNDARDSDEPTMFSLEQFLKFTAEDPDTEYSVLQIIQPALVKVYTQEIENRQAMLEIGVTAQMTQKPRCDATVKDPTKPPWNVRDIGECGYCRCPLFLSEVKDVPTPGSTLCVEHALFILRLPKFSGFDTSTVTMLYTYTVEELRQTLKLVESRLATGNQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-