Pmus000149.1
Basic Information
- Insect
- Pelosia muscerda
- Gene Symbol
- jarid2b
- Assembly
- GCA_963691645.1
- Location
- OY829098.1:2720128-2733099[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-16 3.1e-13 50.5 0.1 6 88 723 802 718 803 0.91
Sequence Information
- Coding Sequence
- ATGAAAATAGGTGTTATATTGTTGACGTTTCATTGTCCTAGGTCAACGCCCAGAAGAGTATTTGCTCAACGGAAGTTCGCACAGGGTGCCTACGTGCCCCCTTTGGCTGGCCCCCAGCCTAGCACCAGTGGGTATGTCGCCCCAGAGCGCCGGGAGCCTGCAGTCTCCAACGACAGAGGCAGTGTCACCCACAATAATGTATCGGCCAAATCATTGCTGGACGTCCTTTCTCTCACTGCAGtttcacATGCTACTCTCTCTCCGCCTCTCGTCAATCCGAATGAAACTCCCGTCGTATTGGTACAGAGGCTACCCGAAAAGAGCTTACAACACTGTCGCGAACAGAGCGCAAGCAGGAATAATGTTAACAATCACACATCTGTTGAAAACGGTGCATCTGGCGACAATCGCGCATCGGTCAACAATCGCGCATCCGTTAACAATCGCGGGTCTGCTAACAGGCGCACGTCTGTGGGATCTGTAGTTAATAGCCGAGCTAACAAAGTGACAAAAAAGACCCGTGGCAAACCGGCCCAACCCGTACGGCATTCGATGAAATTGCGTTCTGTCAGAAGTCCGCCTAAGTGGATGCAATATGCGTCCGAATTTAATGTCGTCAGGACTCCGAGGGCAGTTAGGTTACCGCCACCTCAAGCCGTCGATACCTCTCAAGTTGCCAAGCCACCAGACGAACCAAAACCACCCGCACCTAAAAGGAAAAAAGCAGCTCGTAAAAAGAAGCCGAAATTCACGTCAGATGACAATATGCCCTTGAAATATTTGGCGCAAAGAAACCGAAGTCCAAATATGAACGATATGGCGCAAAGAAACCGAAGTCCAAATATGAACGATATTCAGCCGTATTATGCTTCTGCAGGGACGCCAAGTACATCATACGCTATGCTGCCACCTACAGAAGTTGTGAAGAAAGCGCGTCCTCGCAAACCAAGCGTGGCGAGGACGTCGACAAGGGCGTTGTATAGAACGTCGCCAAGGGTGTACCACAAGCCGGCTGAGCCTCCCGAGCCACCAGATATAATCATGGAAGCGCCTCTATATGACACAGCGCCTCTTCATGACACAGCTCCCCCCATGGAACCTCAAGAGATGGCAACAGTGGTTGTTGAGAGGTTGACGACAGGCGAACCACAAGATCTGGAGGAGAAACATATAGCAAATAGCCATACAGGTATCTCCACACACACGTCGATGGTGGTAGAAGTAGATCCGAGAACACAACCCCCTGGACTCATCGCGGAAGTACATAATGTAGACGCAGGATTGGATGACGAGAGCGTTATAGAGGTAAAAGTCACGGATGCCCCGACAGCTTCTTCTACTCCTGTCAATTACTCCCGCGCCCAGGGCATCCACCGCTGGTTAGACGATACAGTCTCGACGGAGACGGAGTCTATCGCGCCAACGATCGTAGACGACGATGATGACGTCATCATTGTGTCTGGCGACTGCCCATCACACAAGTGGAACACCATCAATGACGCGGCAAGAGCCCCGGCTGTTGAATTCCAGTCTCGATGCAAAGAGTGCCAGCACTGTTTGAGGGTTGAAAAGGCGGTTAAGTTAACCGCTCTTCTGAAAAGACAGAGCAAGATAGAGTGTATTACTGACGAAGCAGTCGCCGGGCCGAGCACCGACCCGGATTTACAATTGAAAAAGGAATTTGATGAGCATTACACAACGGAATTACTGCCTAAACATCCTCATCTTATGATCAAGATACGGTTGAGGAACACGCATACGAGACAGTACTCTGCCTGCCTCATCCCCAGATCAGAGGCAAAGGGCAGTGAAATGTTCTGTCTGGTGGAGAAAGAGCCCATCCTAGACCAGATGATTGAATCTCTGAGCTTACGGCTGGGCGACGTTCCAGCGAACCAGATAATTGGTCCGGTAGAAGATATTATCAGCAAACCAGTCCATAATAAATATGACGCACCTATATTCTACCCGACTGTGTTAGAGTTCGAAGATCCAATTACGTACATCGAAAAAATTTGGCATCGCGCAGCCAAATACGGGGTGTGCAAAATTGTGCCGCCGGATGGGTTCGTGCCGACTTGCAGTATATCTGAAGAAATACGATTTCAAGTCACCAACCAATATGTTAACAGACTGTACAAGCGATGGGGTGAAGCTTCCAGAACTATTAGTGCTATTAGTGCCTGCCTTAAGAATCATAATGTTGATCTGAAACAAGCTcaaatgATTCAGGGCGTGGAAACTAACCTTGTGAAATTAATGCAAACCGTTGATAAGCATGGTGGTATCCAAACTGTAATCAATAAGAAAAAATGGACTAAAATAGCGGAAGATATGAACTTTAGCAAACACCCGCACGTTCGACGCAAGCTGGAGGTGTTGTACTACAAAGCGCTCTTACCGTTTTGCACCCTCACTGTCGAGGAGCGCGATGAACACTTCAAAGCTAGTGATTTATATTGGGAAACTACCCACGCTAAATTACTTAAACGAGCGCAAGACCCATTCCATCAACGAACTCGTTTGTTGTCCGGCCTTGAGGCTTCCGACAGCGAAATGGACCTTGAGTATGAGGAAGAATGTGTCAAGGAAAGTGGCATCTCCATGAACATAGCTGGATTTAAAAAGATATCAGGGATAGTTCACGATCAGCTTTACCATACGAAAGGAGTATATTTGAATGAGTACGAGCGGGATTATTGGAATCTTGTACAATCGGGCACGGAACACATTTGTGTGAATTCGGCATCGATCGATACAGGCCTGGCTGGTTACGGTTTCACAAAGAACCCTGATGATGAGTACGGCCGCCATCCTTGGAATTTGAAGGTGCTGTCGAAGAACCCCGAAAGCATGCTCCGGCCGCTCGGTTCGGTGTTGGGCCTGACTGTTCCCTCTCTGCACCTGTTCATGATCTTCTCCACCAGCTGCTGGCACAGAGACCCGCACTCACTGCCCTGGATCGAGTACATGCACCACGGCGAACCCAAGATATGGTACTCGGTGCCTGAGAGCCAGGATGCGAAGTTCCGCGCCGCCACTGAGGAGCTGTGTCCAATTGCGGTCCAAAAGAAAAGGGCCCTCTGGCTACCAACCGACATAGCCATGATCCCGCCGGATGTATTGCGCGCCCGAAATGTCAACGTCTACCGCACAGAGCAGAAGGCGGGCGAGTTCATCCTCGTCATGCCGAAGGCCTACTCCTGCTCCTTCAGCACGGGCTATGCGGTCACCGAGAGCACGTACTTGGCTACCAAGCGCTGGCTGCCTAACCTGCTAGATATTTTTAACGACGCCCGGGACTCCGACGAGCCAACTATGTTCAGTTTGGAGCAGTTCCTGAAGTTCACAGCCGAGGACCCGGATACTGAATACTCGGTGTTGCAAATCATCCAACCGGCGCTGGTGAAGGTGTACACGCAGGAGATCGAAAACAGACAGGCCATGCTGGAAATCGGCGTAACCGCACAAATGACGCAGAAACCACGATGTGACGCGACTGTGAAGGACCCTACGAAGCCGCCGTGGAATGTTCGAGACATCGGCGAGTGCGGATATTGTCGGTGCCCGCTCTTCTTGTCGGAGGTGAAGGACGTACCAACACCGGGCTCGACGCTGTGTGTAGAACATGCCCTGTTCATTCTCAGGCTGCCCAAGTTCTCCGGCTTTGATACCTCGACTGTGACCATGCTTTACACTTACACCGTGGAAGAACTCAGGCAAACGCTGAAGCTCGTGGAAAGCCGCCTAGCGACAGGCAATCAGGCTTAG
- Protein Sequence
- MKIGVILLTFHCPRSTPRRVFAQRKFAQGAYVPPLAGPQPSTSGYVAPERREPAVSNDRGSVTHNNVSAKSLLDVLSLTAVSHATLSPPLVNPNETPVVLVQRLPEKSLQHCREQSASRNNVNNHTSVENGASGDNRASVNNRASVNNRGSANRRTSVGSVVNSRANKVTKKTRGKPAQPVRHSMKLRSVRSPPKWMQYASEFNVVRTPRAVRLPPPQAVDTSQVAKPPDEPKPPAPKRKKAARKKKPKFTSDDNMPLKYLAQRNRSPNMNDMAQRNRSPNMNDIQPYYASAGTPSTSYAMLPPTEVVKKARPRKPSVARTSTRALYRTSPRVYHKPAEPPEPPDIIMEAPLYDTAPLHDTAPPMEPQEMATVVVERLTTGEPQDLEEKHIANSHTGISTHTSMVVEVDPRTQPPGLIAEVHNVDAGLDDESVIEVKVTDAPTASSTPVNYSRAQGIHRWLDDTVSTETESIAPTIVDDDDDVIIVSGDCPSHKWNTINDAARAPAVEFQSRCKECQHCLRVEKAVKLTALLKRQSKIECITDEAVAGPSTDPDLQLKKEFDEHYTTELLPKHPHLMIKIRLRNTHTRQYSACLIPRSEAKGSEMFCLVEKEPILDQMIESLSLRLGDVPANQIIGPVEDIISKPVHNKYDAPIFYPTVLEFEDPITYIEKIWHRAAKYGVCKIVPPDGFVPTCSISEEIRFQVTNQYVNRLYKRWGEASRTISAISACLKNHNVDLKQAQMIQGVETNLVKLMQTVDKHGGIQTVINKKKWTKIAEDMNFSKHPHVRRKLEVLYYKALLPFCTLTVEERDEHFKASDLYWETTHAKLLKRAQDPFHQRTRLLSGLEASDSEMDLEYEEECVKESGISMNIAGFKKISGIVHDQLYHTKGVYLNEYERDYWNLVQSGTEHICVNSASIDTGLAGYGFTKNPDDEYGRHPWNLKVLSKNPESMLRPLGSVLGLTVPSLHLFMIFSTSCWHRDPHSLPWIEYMHHGEPKIWYSVPESQDAKFRAATEELCPIAVQKKRALWLPTDIAMIPPDVLRARNVNVYRTEQKAGEFILVMPKAYSCSFSTGYAVTESTYLATKRWLPNLLDIFNDARDSDEPTMFSLEQFLKFTAEDPDTEYSVLQIIQPALVKVYTQEIENRQAMLEIGVTAQMTQKPRCDATVKDPTKPPWNVRDIGECGYCRCPLFLSEVKDVPTPGSTLCVEHALFILRLPKFSGFDTSTVTMLYTYTVEELRQTLKLVESRLATGNQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01166375; iTF_01166376;
- 90% Identity
- iTF_01166375;
- 80% Identity
- -