Pmus005162.1
Basic Information
- Insect
- Pelosia muscerda
- Gene Symbol
- Xbp1
- Assembly
- GCA_963691645.1
- Location
- OY829102.1:3526372-3529340[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 3.8e-15 56.3 4.8 2 52 46 96 46 98 0.97 2 2 1.1e-05 0.012 16.2 2.0 28 55 86 113 85 118 0.91
Sequence Information
- Coding Sequence
- ATGAGCGCCCCTATCATCATCACTGTGCCGAACAACTATCTGGCGGTGGACGATATGGAGATGGAGTCAAAGGTGGTCATTGACGTGGCATCTCCGTCTCCATCCAGGAAGAGGCGCCTTGACCACTTAACATGGGAGGAGAAAATGCAAAGAAAGAAGTTGAAAAATCGCGTGGCGGCTCAGACGTCGCGTGACAGGAAAAAGGCGAAAATGGATGAAATGGAATCAAGAATACAGCATTTTATAGATATGAATGAGCGTCTCACTAGCGAAGTTGAGAGTTTAAAAGCTTTGAATGAGCGTTTGCTTAGTGAAAATGCTTCGCTTCGTAGCGAGGCTGCGGCGCGGACCGTCGCGGGAGCCCCCAGACCAGCAGAGTCTGATCCTCAGCAGAAGGAAGGGCCCCCGGCGGCGATCCACCTCCTCGCTCACTTCGACTCAGAAGAGTACCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAAGTGCTTCAGGAGCGGCTCAAAATGACCCAGTCCGGGACACTAGAGACTGCCCTGAAGGAACTAAAGTGGTGGGGACCACAACAAAgcacctggaatccagtgaagGTGTAGTCGTAGATATCAAACATGACGTTGACAGGATATTGTCACAGCACTCCTACGCGCATCCTTACAAACCTGAGATTGTCATCACTGAACCTATTGAACCAATTGAAGTACAACTTaaagaagataataatgataaaggAGACATGTTCTACGCCAGTTGTGATGAAGCCAATGACTGCATCACTATCGAAGTGCCATGTGAAGAACACATAGTTGAAGATACTCCTGTACAGATAGAGACGGACCTCAAACCTTTAACGGACATCTCAGAGATCAAACCGTTGACGGATATCTCTGAGATTAAATTGGAGTGCGATATGAAAATGCTCTCTCCAATGACAATGTCTCCTGGGTCTGTAGAGGACAACCTGGGCTTGTCTCCGTCACATACAAACTTCAGCTCGGACTTGGGCTACGAGTCATTGGCTTCACCGCTAAGTGAACCGGATCCTATGGCTCTTTCAGACTTCTACTGCGATTTTTGGTGTGAATCATATTCAGAATTGTTCCCTGGCCTAGCGTAG
- Protein Sequence
- MSAPIIITVPNNYLAVDDMEMESKVVIDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIQHFIDMNERLTSEVESLKALNERLLSENASLRSEAAARTVAGAPRPAESDPQQKEGPPAAIHLLAHFDSEEYLDTLHQLADSLLKEIDASASGAAQNDPVRDTRDCPEGTKVVGTTTKHLESSEGVVVDIKHDVDRILSQHSYAHPYKPEIVITEPIEPIEVQLKEDNNDKGDMFYASCDEANDCITIEVPCEEHIVEDTPVQIETDLKPLTDISEIKPLTDISEIKLECDMKMLSPMTMSPGSVEDNLGLSPSHTNFSSDLGYESLASPLSEPDPMALSDFYCDFWCESYSELFPGLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -