Pinf038984.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- -
- Assembly
- GCA_963921195.1
- Location
- OY992540.1:137261401-137278118[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.2 17 7.4 0.1 2 23 235 257 234 257 0.91 2 16 0.018 1.6 10.7 3.7 1 23 293 316 293 316 0.97 3 16 0.082 7 8.7 3.2 1 23 324 347 324 347 0.98 4 16 0.00064 0.054 15.3 5.4 1 23 560 583 560 583 0.98 5 16 0.22 19 7.3 0.4 2 22 645 665 644 667 0.88 6 16 6.2e-07 5.3e-05 24.8 2.1 1 23 881 904 881 904 0.98 7 16 7.6 6.5e+02 2.5 0.5 2 20 964 982 963 986 0.84 8 16 0.01 0.89 11.5 0.2 1 21 1019 1039 1019 1040 0.96 9 16 0.24 20 7.2 0.7 2 23 1185 1207 1184 1207 0.93 10 16 7e-05 0.006 18.3 4.1 1 23 1247 1270 1247 1270 0.98 11 16 0.038 3.2 9.7 2.0 1 23 1282 1305 1282 1305 0.97 12 16 0.17 15 7.6 0.8 2 23 1535 1557 1534 1557 0.86 13 16 2.4 2.1e+02 4.0 9.0 1 23 1590 1612 1590 1613 0.95 14 16 0.013 1.1 11.2 1.9 2 23 1667 1688 1666 1689 0.93 15 16 0.00017 0.014 17.1 3.3 1 23 1722 1745 1722 1745 0.98 16 16 0.5 43 6.2 3.5 2 23 1751 1773 1750 1773 0.95
Sequence Information
- Coding Sequence
- atgtcTCAATCAACTTTGTGCCTTCTGTGTGCAAATTTATACAATGAATGCAAAAGTTTATTTGATGAAAATGGGCAGTTAAATGAAGTTTATGAAATAACATGCAAATATTTTGATCCAAATttATTAAATCCTGGATTGGAATGTAATACAACAGCGGCTTTATGCCTAGAATGTTGGaaacatatttttgatttttatacatTTCAACAAACTGTATTAGATGCTCGAACACAACTGGAAGATAAAAAACCGTATATCAAATTAGAAAATCTAATTTTAAGTACTAACGAAAGAGAATTGCTAGATTTAGACTGTAATCAAACAAATGAACAAACAACTTTTAGTTACGTCGTAATTCAAACAAATGAtgatgaaatttcaaaaaaactcaATCCCCAAGAAACCATACTGGAAACTATTAATGCAACAATTGGAAGCCAAGACAATTTGAACTACGCTCCGGAACTAACCGAGTCTCATTCATCCAAAGATTGTGAAATCGGCCAAAGCTGTATCAACCAGGAAAGAACAATACTTAGACCCAGTCCTGCTAATACAACGACAACTAATGCAATACTACCTATTAATGATAATTTAATTTGTCATTCTTCAAAGTTAACTGCTGATATTCGATATCCAGCCAATAAACGAAGAAGTGTAGAAAATGACAAATTAATAGCTAAATGGCGACAAAATTTAGAATGTGTTATATGTTACGAAACCTTTGCAAATTATTCTACATTAGGAATACATTTTGAAATTAATCATCCAAATGAAGAATGTCATATAATCTGTTGtgatttaaaaattaatcaaagaTGGAAGTTGGTGGCACATATTCGTAAATTTCATAGTACAATGGATATGAAACTACATAAATGTAAATTATGTGAGCAATCATTTTTAAATGATTATAATTTACAGCGACATTTGAATAAAAAccataaacgtttaaaaaaacgcatttatAAATGTAAGTCATGTAAAAGTATTTTCATAAATGAGAATACTTTAAAGTcacattttcgtaaaaaccaTAAGGAGACCTCTAAGCGTGATAGAAAACTGCGTTCCAGTTTAATTACTAATTTAAATAATACaacagatgatgatgatgatttgaACTCTAACAATAATAAGGAAGGAAATTCACAATGTTCAAAAACTTCTGCTGAAGCGGAAGAAACTGAATTGAAGTTTAAAAATAGTCAGGATTTAAAAACTGGTAATGAATTTGATCCACTATTAGAAAACTCTAATATGAATGAAAATGAATCAACAGAAATATCTCAAGAAAAAGAAAATGTTCAATCAAAACCTTCAGATATTGCGAATTTGAAAGTCAAAACTTGTTTCAATTCAGATATAACCTCCGACAATACAGATCCAATTAAAACTAATTACTTTAAAGCTCAAGACtttgatatttttagtaaaacctacagcaatgctaaaaataaaaaaaagaattatgatAATTGTATAAAAACATTAAAAGGAGATTTAGAATGTCCTAAATGTTTTGAAAAtggttttaaaaatttcgatttattaacaaaacattttcagcATAAACATCCCGATGAAAGAAGTCACATTATATGTTGTCAAGCTAAATTGAATACCCGATTTCGTATCATGGAACATTTACGATTTCATATAGATCCCAAGGCATATCAATGTTATTTATGTTATAAATGTTTTTCGAATACTGCAAATTTAGAACAACATAAACGTAAAACACACAGGGGAGAAAAATCTTGTAGTCAGTGTCAAAAACCGCCAAGAAAcataattttgaataaaaataaatccCAGGATAGTTTTCAAATAACTCCAACTAGCAATTATAATACGTTAATATGTTGTCAACATAAACAAAAACTATTGGAAACTGATGCCAAAATGACAAAATGGAAAATCGATTTAGAATGTCGTATATGTAAGATGATATTTCCGTATTACTCCATGTTACGAGATCACTTTTTTTATGATCATCCCGAAGATAAATTCTATACATTGAGACCTAAAAGAAAAAATCATTCTTTAAACAAATCAGATGATGATTCAAATTTAGATGATATGAAGGAGAAAActtctaaaaagttaaaaaaattaaaaaagagccTCAAAGTTAAAAATGAATCTAAATTAGAATGCGTTAACGATTTAGTTAAATCAGCAGCAAACTGTAATAATGATAAAGAAACTAATTTCGATTTAACATCTCAAGAAAAGGAATATTCCTATAGTTTCCTTCAATCACAATCTGATATACAATTAACTCCCTTAGATATAGTGGATATAAAAGATGAAGTTCCTGGTTGTTCAGATCTATCTCCAGCTAAAGATCTCTTGTTAAATCAATATGATACTGTAGACtataatattttcacaaaaacgtTTAGCTCgctccaacaaaaaaaattggaatatgatagttttataaaaaaactaaaaggtAATTTAAAatgtccaaaatgtccaaaagtaGAACGGCAAAATTTTGCTGTGTTAACTAAACATTTTCGTGATAAACATCCCGATGATACTTGCTACATTATATGTTGTAACAATAAATTGAATAGTCGTTATCGTATTATGGAGCACTTACGTTTTCATTTAGATCCGAACGCTTATCAATGTGAAATATgtgaaaaatgtttttcgacttaTGATAATTTAGAAGCACATAGACGCAAAGTACACATTAAAGAACAATCTTGTCTTCGGTGTAAAAAaccgtcaaaaaaatatttaactaaaaaaaaagacgACGAGTTCCACATTTCGCCAAATACGGAATATAATACGGAAGTATGTTGTCAACGTAGAAAAGCAATTTTGGAAAACGATGCCATATTGGCAAAATGGAAACGGGAGTTAGAATGTCGTATATGTGAGACGAAATTTCCGTATTACTCCATATTACGTGATCACTTTTTTTATGACCATCCAAACGATAAATTCTTTATTGAGTGTTGTGGCCGTAAAATACCCTACGTACATGAATCTGTACGACATATTCGTGTACACTTAGATGATATGGGATTTAAATGTGAAATATGTAATTCTCAATATGCTTATGAAAGTACTTTAAACATTCATATGATGAAAcTATTAAATCCAGATATAAAAAATTcatcaactgttatttgtatagaATGTTGGCAATACATTAATGATTTTTATACATTTCAACAATCTGTACTAAAATCTCAAGCACATTTAGAATATCAACAACCAATTATACGTTTAGTAAGATTGGAAGAAGATAATCAATTTAATATGTATCTGAATACTAACAAAGGATTGCTTTCTAGCTATGCCAAGAAACCGACTGCGCCAATATCAGTTTTCGATATAATAAAGATAAATGGAAAACAACAAATTGATTTTAAAACTCTAGAAACCATACAACAAACTACAGATCCTGTTGAGCAGTATAAATCAAATAGTATAGAATCTAATGACACAACTAACTTTTATTATACTGATGAACGAACTAGAAAAAATGATGATTTTATTGCTAAATGGAAGGGAAAATTGGAGTGTGTAATATGTAATAatatatttccaaatttttctacatTACATCAACATTTTCTTATACAACATCCGTTTGAAAAATGTCATATTAAATGTTGTGGCAACAAGTTAGATGCGAGATGGAAAATTGCCAAACATATACGAAAATATCATGATTTTCGACTTCGACTGGTTCGAAAACTTAAATATAAATGTGATAAATGCGAGAAGTTATTTGACCATAGTCGCAGTTTAAACAAGCATATGCGTGTAAAACATACTGACTCATTTAAACCGAGACACAGTCTGTCCTATCGATGTAAATTCTGTAGAGCAAAATTTTCACTAGAGGATAGATTAGAAAAGCATATACTTAAAAAGCATACGGAAAAACAATTaactacaaataattttgtaaattatggGAATAATGTTAAGTCTACTAATAAATCAATAACTTTGGAAAAATCTCAAAGCCATCAAGATTCAGGCTACCAAATTAATTATGAAGATTCTATGAGTTCAATTGTTTCCAATGGTATTGAAATGCATAattttatattggaaaaatgtcaagAGAGAGGAGAAAAAAATGTTACTGTACCAAATAACATTTCAAATTTAACTCTACAACAATTTCAAGAAAATGAAATTCATGTTCAGAATAATTCTCAAGGAAAGGAACAAATAGTTAATACAACAAATGACATAAACAATTGTTATCTGATTCCTAATATTGACGATTTTTTGGAACAATCTCTAGAAGTTTCTAATGATGATAATAATCAAATGTTAGAAGAATTTCAAGAAATCGAAAAACATATTACTATAAATCGTAATAAAATTGCAATGTCTTTGGCGGCTCTTGATGGTGGTAATATACCCATGCCACCTTTAGATATAGTTGATGTTAAACCAGAATTTCCGCTATGTTCTGATACAGATTCTGAATTcgaaactaatgaaaaaatatctaaaCTAAATGATTTTTTTGCCAGAATATCCAGCATTAGCACACGAGAAAAAAGATTAGAGTATGatgattatataaaaaattggaaagaaAATTTACCCTGTCCCATATGTAACGAAATGTTTAATAACTTTTCGCTAATAAGTTCACATTTTCATCTAAAGCATCCGGGTGAAACAATTCATATTGTTTGTTGTCAAATCAAACTGTGTAATCGTTTTCAAATTGTTGAGCACTTACGTTTACATATAGATCCAAAAGCTTATCAATGTAATATTTGTTATAAGTGTTGCGACACTATGCGATATTTAGGAAAGCATAAAAAAGACCATCATCCACAACAACCAGCAGAGTTCAACAACAACGATAAATATTTACTATGTCAATGTGAAACATCTACAGAGTTGAATACTTCAAATAATGCCATTTGTTGCGAACGTAAAAGAAATATGTTGCAAAATGATGAGATTATAGCAAAATGGTTAGGAGAACTGATCTGTGCAGAATGTCATGGGCAATTTTCCACTTATTCTTTGTTGCAACAACATTATGCTACTCATCATCCAAACTCAACATTTTCAATAGTTTGTTGTCAACGaagttttttcaaattaaaagatGCCGTAGAACATATTCGTTTTCATTTAAATCCGGATGCATACAAATGCCAAATATGTAATGAAACGTTTAATGGAAAAAGGAGTTTGTCGCATCATTTGCGTTCCCAACATAATGAAAAACTTCTACATTGTGATCAATGTAATAAAAGTTTTCTTGTAGATTATACCCTTAAAAGACACAAGAAAATGTATCATAATTAA
- Protein Sequence
- MSQSTLCLLCANLYNECKSLFDENGQLNEVYEITCKYFDPNLLNPGLECNTTAALCLECWKHIFDFYTFQQTVLDARTQLEDKKPYIKLENLILSTNERELLDLDCNQTNEQTTFSYVVIQTNDDEISKKLNPQETILETINATIGSQDNLNYAPELTESHSSKDCEIGQSCINQERTILRPSPANTTTTNAILPINDNLICHSSKLTADIRYPANKRRSVENDKLIAKWRQNLECVICYETFANYSTLGIHFEINHPNEECHIICCDLKINQRWKLVAHIRKFHSTMDMKLHKCKLCEQSFLNDYNLQRHLNKNHKRLKKRIYKCKSCKSIFINENTLKSHFRKNHKETSKRDRKLRSSLITNLNNTTDDDDDLNSNNNKEGNSQCSKTSAEAEETELKFKNSQDLKTGNEFDPLLENSNMNENESTEISQEKENVQSKPSDIANLKVKTCFNSDITSDNTDPIKTNYFKAQDFDIFSKTYSNAKNKKKNYDNCIKTLKGDLECPKCFENGFKNFDLLTKHFQHKHPDERSHIICCQAKLNTRFRIMEHLRFHIDPKAYQCYLCYKCFSNTANLEQHKRKTHRGEKSCSQCQKPPRNIILNKNKSQDSFQITPTSNYNTLICCQHKQKLLETDAKMTKWKIDLECRICKMIFPYYSMLRDHFFYDHPEDKFYTLRPKRKNHSLNKSDDDSNLDDMKEKTSKKLKKLKKSLKVKNESKLECVNDLVKSAANCNNDKETNFDLTSQEKEYSYSFLQSQSDIQLTPLDIVDIKDEVPGCSDLSPAKDLLLNQYDTVDYNIFTKTFSSLQQKKLEYDSFIKKLKGNLKCPKCPKVERQNFAVLTKHFRDKHPDDTCYIICCNNKLNSRYRIMEHLRFHLDPNAYQCEICEKCFSTYDNLEAHRRKVHIKEQSCLRCKKPSKKYLTKKKDDEFHISPNTEYNTEVCCQRRKAILENDAILAKWKRELECRICETKFPYYSILRDHFFYDHPNDKFFIECCGRKIPYVHESVRHIRVHLDDMGFKCEICNSQYAYESTLNIHMMKLLNPDIKNSSTVICIECWQYINDFYTFQQSVLKSQAHLEYQQPIIRLVRLEEDNQFNMYLNTNKGLLSSYAKKPTAPISVFDIIKINGKQQIDFKTLETIQQTTDPVEQYKSNSIESNDTTNFYYTDERTRKNDDFIAKWKGKLECVICNNIFPNFSTLHQHFLIQHPFEKCHIKCCGNKLDARWKIAKHIRKYHDFRLRLVRKLKYKCDKCEKLFDHSRSLNKHMRVKHTDSFKPRHSLSYRCKFCRAKFSLEDRLEKHILKKHTEKQLTTNNFVNYGNNVKSTNKSITLEKSQSHQDSGYQINYEDSMSSIVSNGIEMHNFILEKCQERGEKNVTVPNNISNLTLQQFQENEIHVQNNSQGKEQIVNTTNDINNCYLIPNIDDFLEQSLEVSNDDNNQMLEEFQEIEKHITINRNKIAMSLAALDGGNIPMPPLDIVDVKPEFPLCSDTDSEFETNEKISKLNDFFARISSISTREKRLEYDDYIKNWKENLPCPICNEMFNNFSLISSHFHLKHPGETIHIVCCQIKLCNRFQIVEHLRLHIDPKAYQCNICYKCCDTMRYLGKHKKDHHPQQPAEFNNNDKYLLCQCETSTELNTSNNAICCERKRNMLQNDEIIAKWLGELICAECHGQFSTYSLLQQHYATHHPNSTFSIVCCQRSFFKLKDAVEHIRFHLNPDAYKCQICNETFNGKRSLSHHLRSQHNEKLLHCDQCNKSFLVDYTLKRHKKMYHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -