Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992538.1:51781326-51793253[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.077 6.6 8.7 1.5 6 23 327 344 319 344 0.98

2 8 3.1e-05 0.0026 19.4 1.4 1 23 350 372 350 372 0.98

3 8 4.3e-06 0.00037 22.1 0.2 1 23 380 403 380 403 0.97

4 8 0.81 69 5.5 1.1 3 23 411 431 410 431 0.88

5 8 0.01 0.87 11.5 0.3 3 23 441 462 439 462 0.93

6 8 0.028 2.4 10.1 1.8 1 21 470 490 470 493 0.95

7 8 6e-06 0.00051 21.7 1.8 1 23 499 521 499 521 0.98

8 8 0.00055 0.047 15.5 6.3 1 23 527 549 527 550 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.077	6.6	8.7	1.5	6	23	327	344	319	344	0.98
2	8	3.1e-05	0.0026	19.4	1.4	1	23	350	372	350	372	0.98
3	8	4.3e-06	0.00037	22.1	0.2	1	23	380	403	380	403	0.97
4	8	0.81	69	5.5	1.1	3	23	411	431	410	431	0.88
5	8	0.01	0.87	11.5	0.3	3	23	441	462	439	462	0.93
6	8	0.028	2.4	10.1	1.8	1	21	470	490	470	493	0.95
7	8	6e-06	0.00051	21.7	1.8	1	23	499	521	499	521	0.98
8	8	0.00055	0.047	15.5	6.3	1	23	527	549	527	550	0.96

Sequence Information

Coding Sequence: ATGGAAGGTTGTTTATTATGTTTGgagataaataaagattttttggatTGTATACCAGCAGATTCCATCCAATGGCAGGAACTTAAGATAAGAAAACTAATAGAGAAACATTTTTGGGTCATGGAATCTTGGTTACCTAACTCATGTCTGTGTAATACTTGCTGGCTGGCATTATATGATTTCCATAAATTTTACATTCGCATAGAAGAGGCTCATTTGGATTTTGGTAAACTGATGAAATCCGATATTGAATTGGAATTACATGATAATAacgagaaattaaaaaataattttatcaatgACAAAATTAACCACAACGAAGATGgtaaagaaatatttttgaatgaagtAATAGATGATGTAGATCAATTTGATAAAGATCATACCAAGCATTTCATGAAATTGAATCACATTAATGATTATGACAAAAATAATGATACTTTAATGCAAAAACGTAAAAGAAGAAATAAATCTATCATTTGTAGTAAGAATATAGAAACTGTACAACAAGATCCTTTAACAAATCGTAATCATGTAATGTCTTCGTTATCTAAAAACAACAAACCACTAGAATCTTCTAAAAATCCACAAACCTGTACAGAATCTTTTGAAAATTCAAATATCACAGATGATTTGTTAAGTGATAACAAcgataatgaaaaatttttaaatatgcaaACTTTAGATCCATTACCAACTGCATCCAAACCAAACATATTACTAAACTTCTCTGAATCGGATAATTCCTTTACTGATTCCGATTATGAACCCTTACTAGAAGTCACTAAACGAGataaaaaatgtaagaaaaattCAAAACCACGCAAAAGAGATCGTTCAAAACCCCAAGCAAAAGATATATTTTTAGCTGAAAACTTTGAAATGACTTGTATTCTTTGTAAGATGCCCATGGCCAGCTTTAAATCGTTGGTAAAGCATTTTGAAATGGATCATCAATGTCGTGGCTATGCTagttgttgtaataaaaagttttaCAAACGTAGTTTACTACTTGAACATGTACAAAGTCACGTCGAtccaaatgtttttaaatgtaatCAATGTGGCAAAGTCTTGTCGACACGTAAAGTATTAAAAACTCATCAATTGATGCATTTATCGGAAGAAGAGAAAAAGTTTGCATGTAATGAATGTGGTAAAAATTTTGCGGAACAATATTTACTATCGAATCATATACGTTCGGTACATTTAAAGAAATATGTTAAAATCTGTGATATATGTGGAAAAACATTGCGCTGTAGTGAAATATTTGAACGTCATATGTCAGAACACAAAGGCAAAGCAATACCACCAGTAAATTGTGAAATTTGTGGATTACTTTTATCGCACAAGAAAGCCCTGAAACGGCACGTGGATATATTACATCCGGTGGGAGGACAACAATCTCATACATGTGAAATTTGCTTTAAAGTATCACCCAACATTGTTGCTTTAAAAAAGCATATACGCTGTACTCACAATACGGGCAATATACATAAATGCACCATATGTGGAAGAGGTTTTAAAAGGTCACAAACGCTAAGGGATCATGTGGCAACGCATACCGGTAAAGCTTTATATACTTGTCCTTGGTGTCCAAAAACATTTAATTCAAATGGTTGCATGCATGCTCATAGGAAAAAACATCATCCCCGAGAATGGGAAGAGGCGCATAGACAAAAATATTCCCAAAGTTATAATGTACCCGTAGTTATAAATACAAAAACATTGATTTATGATAAgtgtaaaaaaagttaa
Protein Sequence: MEGCLLCLEINKDFLDCIPADSIQWQELKIRKLIEKHFWVMESWLPNSCLCNTCWLALYDFHKFYIRIEEAHLDFGKLMKSDIELELHDNNEKLKNNFINDKINHNEDGKEIFLNEVIDDVDQFDKDHTKHFMKLNHINDYDKNNDTLMQKRKRRNKSIICSKNIETVQQDPLTNRNHVMSSLSKNNKPLESSKNPQTCTESFENSNITDDLLSDNNDNEKFLNMQTLDPLPTASKPNILLNFSESDNSFTDSDYEPLLEVTKRDKKCKKNSKPRKRDRSKPQAKDIFLAENFEMTCILCKMPMASFKSLVKHFEMDHQCRGYASCCNKKFYKRSLLLEHVQSHVDPNVFKCNQCGKVLSTRKVLKTHQLMHLSEEEKKFACNECGKNFAEQYLLSNHIRSVHLKKYVKICDICGKTLRCSEIFERHMSEHKGKAIPPVNCEICGLLLSHKKALKRHVDILHPVGGQQSHTCEICFKVSPNIVALKKHIRCTHNTGNIHKCTICGRGFKRSQTLRDHVATHTGKALYTCPWCPKTFNSNGCMHAHRKKHHPREWEEAHRQKYSQSYNVPVVINTKTLIYDKCKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -