Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992540.1:97879308-97881545[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.34 29 6.7 0.3 2 23 269 291 268 291 0.95

2 12 0.0001 0.0087 17.8 4.8 1 23 322 344 322 344 0.99

3 12 3.1e-06 0.00026 22.6 1.7 1 23 351 373 351 373 0.97

4 12 7 5.9e+02 2.6 0.5 2 23 402 423 401 424 0.90

5 12 0.5 42 6.2 0.2 6 23 434 451 434 451 0.98

6 12 0.0011 0.093 14.6 1.0 1 23 457 479 457 479 0.97

7 12 7.4 6.3e+02 2.5 0.3 2 23 510 532 509 532 0.92

8 12 0.077 6.6 8.7 0.4 6 23 541 558 541 558 0.98

9 12 0.00023 0.019 16.7 3.9 1 23 564 586 564 586 0.98

10 12 0.0032 0.27 13.1 6.2 1 23 593 616 593 616 0.95

11 12 4.6 4e+02 3.1 4.0 1 14 624 637 624 646 0.76

12 12 0.00051 0.044 15.6 0.4 3 23 653 674 652 674 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.34	29	6.7	0.3	2	23	269	291	268	291	0.95
2	12	0.0001	0.0087	17.8	4.8	1	23	322	344	322	344	0.99
3	12	3.1e-06	0.00026	22.6	1.7	1	23	351	373	351	373	0.97
4	12	7	5.9e+02	2.6	0.5	2	23	402	423	401	424	0.90
5	12	0.5	42	6.2	0.2	6	23	434	451	434	451	0.98
6	12	0.0011	0.093	14.6	1.0	1	23	457	479	457	479	0.97
7	12	7.4	6.3e+02	2.5	0.3	2	23	510	532	509	532	0.92
8	12	0.077	6.6	8.7	0.4	6	23	541	558	541	558	0.98
9	12	0.00023	0.019	16.7	3.9	1	23	564	586	564	586	0.98
10	12	0.0032	0.27	13.1	6.2	1	23	593	616	593	616	0.95
11	12	4.6	4e+02	3.1	4.0	1	14	624	637	624	646	0.76
12	12	0.00051	0.044	15.6	0.4	3	23	653	674	652	674	0.95

Sequence Information

Coding Sequence: ATGGAATTGTGTATAGTTTGTTTAAAGTCTAATGAGGACATTATTTCGCGCATTCATATTGATTCAAAGGAATGGCAAGAATTCAATATACAACGTATCATAGAGAAACACTTATGGTGGTGGTACCTAAAAAATCCCATTACAGATGCCACCAACTCATTACAATGGATTTGCCGACAATGCTGGCTGGAACTATCTacatttcacaaattttttttaacagttaaAAAAGTTCACAATCAGTTCCTAACAATGTCCACAATCTATGAAATAATGGAAATTGATGAAACTGCTGCAAAGCAGGAAAAAATAAAGCAAGAAACTGAAGCTCAAAATGAAATTTCTCCATTGGAAGCCTTAAACCCGTTATACAAAAAACAAAcggataaaaaacaaaattataatagtAGTATTATTGAAACTGAAGAACTTCATATTATGGACATCAAAAATGAAGTTCATTTGGTTAAAACTGTTGTTAACAACGAAGGTGTAGAAAACAAAGTTGACGATGAAACCATGATTCCAAAACTTAATATTAAAAACGAGTATGATAGCAGCGATGAAGGTGATCATCATGATGTAACTGGTGGTAACGATAATAAAGACAAAATCTTTACTGTCTTAAAGGACGATTCTAGACGAAAAACTAGAAGTAGTGGTCTTAAAAAAGCTAAAACTGTCCAAAAAACTAAATCTTTcgcaaacaacaaacaaaaagttTCAAGCAGGGCTAAATTTATTCAAGAAAGTCTCTCCAATGAAGACtgtaaaaagctttttaaagaAACTGGATATAAGCTAGAGTGCAGTATTTGTCAAGTGGGCGTAGCCGATTACAACACTCTCAAAACACActttaataaaaaacataaaattccaGTTTATACCATGTGTTGTGGGAATAAATTTACAGAACGATATTTTATAGATCATTTAAATGTACACAAAAATCCGGAATATTTTAAATGTCAGCGATGCAACAAATCATTCAAAACACGCATTTATTTATCATATCACTTAAAAACTCACGGTCCACGTGAACGTAATTTTAATTGCGAAAAATGTGACAAATCATTTTATAATAATCGACATCTTATAGCTCACATGGTGGTACATGACGACCCAGAAAAAGATATCAGAAAAAAGGAACTATCCGATGAAGCATGTCAAAAACTATTTGAAGAAACTAATTATAAACTTGTGTGCAGCATTTGTCAAATGCCTCAAGTTACTTTTCCTACTCTCATAGAACACTTCAAAACCcatcataataatatttctccTTACGCCATGTGTTGCGAAAGGCAGTTTCCACAACGATGTTTGCTAATAGATCATTTAAATGttcacaaaaatccgaaatatttCAAATGCCAGCCTTGCAAAAAATCATTTCCAAATCGTGTTGTATTGAAAAGACACTTAAAGGCACACAAGAATAATCCTGAAAAACCACTTAAAATCAATCAGCCAATCTCCGCTGAAGCTTGCGAAGAAATATTTAGAAAAACCCAATATAAACTTGAGTGCAGTATTTGCCAAGTGCCTCAGACCGATTTTCGTTCTCTTACAATGCACTTCAATCGTGAACATAAAACACGTGCCTATGCAATGTGTTGTGGCAAACAATTTGTCAAACAATGTTATTTAATAGATCATTTAAATTTGCATGCAAATTCGAAACATTTCAAATGTCCGCATTGCAACAAAGTATTGGCATCACGTCGTTGCTTACAAAATCACGTTAAAATTCATGAGGCGGCTCGTGAACGACATAATTGCACAGATTGTGATAAATCTTAttctaaaaagaaattacttgAATATCACAGACTATCATGTCACGTAACAGATAGTGAGAAAAATTATCCGTGTAGCCAATGTAAAAAGAAGTTTGCATCCGATGTCCTTTGTCGACAACATGAATATCATCAtaatagaattttaaaaaattgcaatatATGTGGACAAACATTTCGCGGAATCGCTTCTTTTAAACAACATATGAATGAGCAGCATGCAAACGAAGGTGATTTAATTCCTACAACTTTCAAAAGTGAACCAATCGCTTCTTTTAAACAAGAAATGAATGAGCAGCATGCAAACGAAGGTGATTTAATTCCTACAACTTGCAAAAGTGAACCAATCGCTTCTTTTAAACAAGAAATGAATGAGCAGCATGTAAACGAAGGTGATTTAATTCCTACAACTTTCAAAAGTGAACCAATATTTTGA
Protein Sequence: MELCIVCLKSNEDIISRIHIDSKEWQEFNIQRIIEKHLWWWYLKNPITDATNSLQWICRQCWLELSTFHKFFLTVKKVHNQFLTMSTIYEIMEIDETAAKQEKIKQETEAQNEISPLEALNPLYKKQTDKKQNYNSSIIETEELHIMDIKNEVHLVKTVVNNEGVENKVDDETMIPKLNIKNEYDSSDEGDHHDVTGGNDNKDKIFTVLKDDSRRKTRSSGLKKAKTVQKTKSFANNKQKVSSRAKFIQESLSNEDCKKLFKETGYKLECSICQVGVADYNTLKTHFNKKHKIPVYTMCCGNKFTERYFIDHLNVHKNPEYFKCQRCNKSFKTRIYLSYHLKTHGPRERNFNCEKCDKSFYNNRHLIAHMVVHDDPEKDIRKKELSDEACQKLFEETNYKLVCSICQMPQVTFPTLIEHFKTHHNNISPYAMCCERQFPQRCLLIDHLNVHKNPKYFKCQPCKKSFPNRVVLKRHLKAHKNNPEKPLKINQPISAEACEEIFRKTQYKLECSICQVPQTDFRSLTMHFNREHKTRAYAMCCGKQFVKQCYLIDHLNLHANSKHFKCPHCNKVLASRRCLQNHVKIHEAARERHNCTDCDKSYSKKKLLEYHRLSCHVTDSEKNYPCSQCKKKFASDVLCRQHEYHHNRILKNCNICGQTFRGIASFKQHMNEQHANEGDLIPTTFKSEPIASFKQEMNEQHANEGDLIPTTCKSEPIASFKQEMNEQHVNEGDLIPTTFKSEPIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -